CN189427
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189427 vs. ExPASy Swiss-Prot
Match: RLA0_ICTPU (60S acidic ribosomal protein P0 OS=Ictalurus punctatus GN=rplp0 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.973e-38 Identity = 83/168 (49.40%), Postives = 108/168 (64.29%), Query Frame = 3 Query: 171 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVG 674 + +A K Y K+ QLL +Y + + ADNVGS Q+Q IR LRG ++VLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG Sbjct: 3 REDRATWKSNYFLKIIQLLNDYPKCFIVGADNVGSKQMQTIRLSLRGKAIVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLPEVRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIRPGDKVG 168
BLAST of CN189427 vs. ExPASy Swiss-Prot
Match: RLA0_NEUCR (60S acidic ribosomal protein P0 OS=Neurospora crassa GN=crpp0 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.670e-37 Identity = 77/165 (46.67%), Postives = 106/165 (64.24%), Query Frame = 3 Query: 180 KAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVG 674 K+ K Y KL LLE+Y I + + DNV S Q+ IR+ LRG++VVLMGKNTM++R ++ T + L+P ++GNVG +FT GDL APAR G +AP DV +P GNTG++P +TSFFQ L +PTKI +GT+EI T ++L++ G KVG Sbjct: 4 KSANKAGYFDKLKGLLEDYRSIFIVSVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRALKTFVADTPE--YERLLPFVKGNVGFVFTNGDLKEVRDKILANKVAAPARAGAIAPADVWIPAGNTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVG 166
BLAST of CN189427 vs. ExPASy Swiss-Prot
Match: RLA0_PODAN (60S acidic ribosomal protein P0 OS=Podospora anserina PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.290e-37 Identity = 77/165 (46.67%), Postives = 104/165 (63.03%), Query Frame = 3 Query: 180 KAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVG 674 K+ K Y KL LLEEY I + + DNV S Q+ IR+ LR VVLMGKNTM++R ++ + + L+P ++GNVG +FT GDL APAR G VAP+DV +P GNTG++P +TSFFQ L +PTKI +GT+EI T ++L++ G KVG Sbjct: 4 KSANKAGYFDKLKGLLEEYKSIFIVSVDNVSSQQMHEIRQALRDQGVVLMGKNTMVRRALKTFL--VDSPEYERLLPFVKGNVGFVFTNGDLKEIRDKILANKVAAPARAGAVAPVDVWIPAGNTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVG 166
BLAST of CN189427 vs. ExPASy Swiss-Prot
Match: RLA0_PLAF8 (60S acidic ribosomal protein P0 OS=Plasmodium falciparum (isolate 7G8) GN=RPLP0 PE=2 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.463e-33 Identity = 74/170 (43.53%), Postives = 109/170 (64.12%), Query Frame = 3 Query: 165 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGA-PARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKV 671 + K SK +KK Y KL L+++Y++IL+ DNVGSNQ+ ++R+ LRG + +LMGKNT ++ ++ + + L+PL++ N+G +F K DL + PAR+G++APIDV +PPG TG+DPS TSF + L I TKI KG +EI V LIK+G+KV Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTRIRTALKKNLQAVPQIE--KLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLGVIAPIDVFIPPGPTGMDPSHTSFLESLGISTKIVKGQIEIQEHVHLIKQGEKV 168
BLAST of CN189427 vs. ExPASy Swiss-Prot
Match: RLA0_YEAST (60S acidic ribosomal protein P0 OS=Saccharomyces cerevisiae GN=RPP0 PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.496e-33 Identity = 75/163 (46.01%), Postives = 101/163 (61.96%), Query Frame = 3 Query: 186 EKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVG 674 EKK Y AKL + LEEY + V DNV S Q+ +R+ LRG +VVLMGKNTM++R IR + F L+P ++G VG +FT L APAR G VAP D+ V NTG++P +TSFFQ L +PTKI +GT+EI++ V+++ G+KVG Sbjct: 6 EKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRGFLSDLPD--FEKLLPFVKGYVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWVRAVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVG 166
BLAST of CN189427 vs. ExPASy Swiss-Prot
Match: RLA0_SCHPO (60S acidic ribosomal protein P0 OS=Schizosaccharomyces pombe GN=rpp0 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.262e-33 Identity = 73/167 (43.71%), Postives = 98/167 (58.68%), Query Frame = 3 Query: 174 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVG 674 A E K Y KL L E+Y + V DNV S Q+ +R+ LRG + ++MGKNTM++R +R L+P+++GNVG +FT DL APAR +AP+DV VP GNTG++P +TSFFQ L IPTKI +GT+EI + V L+ K KVG Sbjct: 2 AISKESKAQYFEKLRSLFEKYNSLFVVNIDNVSSQQMHTVRKQLRGTAELIMGKNTMIRRAMRGIINDMPELE--RLLPVVRGNVGFVFTNADLKEVRETIIANVIAAPARPNAIAPLDVFVPAGNTGMEPGKTSFFQALGIPTKITRGTIEITSDVHLVSKDAKVG 166
BLAST of CN189427 vs. ExPASy Swiss-Prot
Match: RLA0_TRYCR (60S acidic ribosomal protein P0 OS=Trypanosoma cruzi PE=2 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 2.856e-29 Identity = 71/172 (41.28%), Postives = 100/172 (58.14%), Query Frame = 3 Query: 177 SKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLI-------PLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKV 671 S +E K Y+ + L +Y ++L DNV S Q+ ++RR LRG ++MGK T+ K+ + AE +A+ L+ LL GN LIFT ++ APARVG +AP DV+VP GNTG++P TSFFQ LNI TKI KGTVEI++ +++ GD+V Sbjct: 3 SVSEAKREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVERRAEDKKASAYDKLLYNTCIEKKLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAPCDVIVPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSVGDRV 174
BLAST of CN189427 vs. ExPASy Swiss-Prot
Match: RLA0_EIMTE (60S acidic ribosomal protein P0 OS=Eimeria tenella PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.730e-29 Identity = 70/163 (42.94%), Postives = 98/163 (60.12%), Query Frame = 3 Query: 183 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKV 671 A K+ Y +L QL+ E+ ++LV +AD+VGS QL IR LRG + VLMGKNT ++ +R ++ L+PL++ NVG IF + D APA+ G+ AP DV +P G TG+DP T FFQ L I TKI KG +EI V+LI++G++V Sbjct: 6 AAKRREYFPRLLQLVLEHPRVLVVSADHVGSKQLAGIRVALRGQATVLMGKNTKIRTALRQQLQQ--QPQLQALLPLVRLNVGFIFCRADPAAVRAVVQQHKVPAPAKQGVTAPTDVFIPAGPTGMDPGSTGFFQALGISTKIVKGQIEIQQAVQLIRRGERV 166
BLAST of CN189427 vs. ExPASy Swiss-Prot
Match: RLA0_DICDI (60S acidic ribosomal protein P0 OS=Dictyostelium discoideum GN=rplp0 PE=1 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 4.871e-29 Identity = 69/164 (42.07%), Postives = 100/164 (60.98%), Query Frame = 3 Query: 183 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVG 674 +++K + K +L Y +++VA AD VGS+QLQ IR+ +RG VLMGK TM+++ IR A+ LN L+ N +IF K ++ GAPA+ G+ AP DV++P G TG++P+QTSF Q L I TKIN+G ++I+ V +IK G KVG Sbjct: 6 SKRKNVFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRDLADSKPELDALNTY--LKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIPAGPTGMEPTQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQKVG 167
BLAST of CN189427 vs. ExPASy Swiss-Prot
Match: RLA0_LEICH (60S acidic ribosomal protein P0 OS=Leishmania chagasi GN=LCP0 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.955e-26 Identity = 68/167 (40.72%), Postives = 93/167 (55.69%), Query Frame = 3 Query: 192 KIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIP-------LLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKV 671 K Y+ +L L +Y+ +L DNV S Q+ ++RRG RG + +MGK T+ + + A+ + LL GN GLIFT + APARVG + P DVVVP G+TG++P+QTSFFQ LNI TKI KG VEI+T +++ GDKV Sbjct: 8 KREYEERLVDCLTKYSCVLFVGMDNVRSQQVHDVRRGCRGKAEFIMGKKTLQAKIVEKRAQAKDASPEAKPFNDQCEEYNLLSGNTGLIFTNNAVQEITSVLDGHRVKAPARVGAI-PCDVVVPAGSTGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSVGDKV 173 The following BLAST results are available for this feature:
BLAST of CN189427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189427 ID=CN189427; Name=CN189427; organism=Citrus sinensis; type=EST; length=676bpback to top |