CN189426
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189426 vs. ExPASy Swiss-Prot
Match: RLA0_LEIIN (60S acidic ribosomal protein P0 OS=Leishmania infantum GN=LIPO-A PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.795e-19 Identity = 51/120 (42.50%), Postives = 76/120 (63.33%), Query Frame = -1 Query: 315 NIPTKIYKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQ 674 NI TKI KG VEI+T +++ GDKV +S A LL KL I PF Y + V SV++ G +++ E L ++ED + + +S V A+AL PT + M V+A+KN++AV++AT Y F + Sbjct: 149 NIATKIAKGMVEIVTEKKVLSVGDKVDNSTATLLQKLNISPFYYQVNVLSVWDRGVLFTREDLMMTEDMVEKMLMEGLSNVAAMALGAGIPTSSTIGPMLVDAFKNLLAVSVATSYEFEE 268
BLAST of CN189426 vs. ExPASy Swiss-Prot
Match: RLA0_LEICH (60S acidic ribosomal protein P0 OS=Leishmania chagasi GN=LCP0 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.795e-19 Identity = 51/120 (42.50%), Postives = 76/120 (63.33%), Query Frame = -1 Query: 315 NIPTKIYKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQ 674 NI TKI KG VEI+T +++ GDKV +S A LL KL I PF Y + V SV++ G +++ E L ++ED + + +S V A+AL PT + M V+A+KN++AV++AT Y F + Sbjct: 148 NIATKIAKGMVEIVTEKKVLSVGDKVDNSTATLLQKLNISPFYYQVNVLSVWDRGVLFTREDLMMTEDMVEKMLMEGLSNVAAMALGAGIPTSSTIGPMLVDAFKNLLAVSVATSYEFEE 267
BLAST of CN189426 vs. ExPASy Swiss-Prot
Match: RLA0_METJA (Acidic ribosomal protein P0 homolog OS=Methanocaldococcus jannaschii GN=rplP0 PE=3 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.172e-12 Identity = 42/128 (32.81%), Postives = 68/128 (53.12%), Query Frame = -1 Query: 288 IPTKIYKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEYSFPQADKVKEYLA 671 IP I KG + I +++KG+ V AA+L +LGI+P GL + +VYE+G +Y+P+VL + E+ L+ ++ LA +YP P + A+ N A AL+ E +F + + LA Sbjct: 149 IPAAIEKGKIAIKEDKVVVKKGEVVSPKLAAVLDRLGIKPIKVGLNILAVYEDGIIYTPDVLKVDEEKLLADIQAAYQNAFNLAFNTAYPAKEVLPFLIQKAFIN--ARALSVETAFVTKETAGDILA 274
BLAST of CN189426 vs. ExPASy Swiss-Prot
Match: RLA0_METVO (Acidic ribosomal protein P0 homolog (Fragment) OS=Methanococcus voltae GN=rplP0 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.056e-11 Identity = 38/111 (34.23%), Postives = 60/111 (54.05%), Query Frame = -1 Query: 339 IPTKIYKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVAL 671 +P I KG + I + ++GD V + A +L+KL I+P GL V VYE+G VY PE+L + ED+ + K S+ + L++ PT A + A+ N AV++ Sbjct: 150 LPAAIEKGKIGIKEDTIVAKEGDVVSAKLAVVLSKLDIKPMEVGLNVLGVYEDGIVYDPEILKIDEDEFLAKLQSAYTGAFNLSVNAVIPTSATIETIVQKAFSNAKAVSI 260
BLAST of CN189426 vs. ExPASy Swiss-Prot
Match: RLA0_PYRHO (Acidic ribosomal protein P0 homolog OS=Pyrococcus horikoshii GN=rplP0 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.507e-11 Identity = 38/115 (33.04%), Postives = 60/115 (52.17%), Query Frame = -1 Query: 327 IPTKIYKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEY 671 IP +I KG V I +++ G+ + A +L LGI+P GL V +VYE+G VY+P+VL + E + ++ + LA+ I+YPT + A+ N VA+ Y Sbjct: 145 IPARIEKGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVYEDGIVYTPDVLAIDEQEYIDMLQKAYMHAFNLAVNIAYPTPETIEAIIQKAFLNAKTVAIEAGY 259
BLAST of CN189426 vs. ExPASy Swiss-Prot
Match: RLA0_PYRAB (Acidic ribosomal protein P0 homolog OS=Pyrococcus abyssi GN=rplP0 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.580e-11 Identity = 38/115 (33.04%), Postives = 61/115 (53.04%), Query Frame = -1 Query: 327 IPTKIYKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVALATEY 671 IP +I +G V I +++ G+ + A +L LGI+P GL V +VYE+G VY+P+VL + E + ++ + LA+ I+YPT + A+ N AVA+ Y Sbjct: 145 IPARIERGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVYEDGIVYTPDVLAIDEQEYIDMVQKAYMHAFNLAVNIAYPTPETIEAIIQKAFLNAKAVAVEAGY 259 The following BLAST results are available for this feature:
BLAST of CN189426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189426 ID=CN189426; Name=CN189426; organism=Citrus sinensis; type=EST; length=674bpback to top |