CN189422
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y5413_PSEA8 (UPF0061 protein PLES_54131 OS=Pseudomonas aeruginosa (strain LESB58) GN=PLES_54131 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.557e-23 Identity = 65/165 (39.39%), Postives = 95/165 (57.58%), Query Frame = -3 Query: 259 FMDEYQA----IMTKKLGL---PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 732 F+ YQA +M ++LGL + ++ ++ +LL M VDY+ FFR L PE L L+ +D +EA+ W +Y + + G E R+ M++VNP YVLRNYL Q AI+AAE GD+ EVR L +++ RP++EQPGME++ R PP W Sbjct: 323 FLPLYQAHYLDLMRRRLGLGVAAENDQALVQELLQRMQGSAVDYSLFFRRLGE-----ETPE-RALASLRDDFVD-----REAFDRWAEAYRRRVEEEGGDQESRRRRMHAVNPLYVLRNYLAQQAIEAAEQGDYTEVRLLHQVLSRPFEEQPGMERFTRRPPDW 476
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y5023_PSEAE (UPF0061 protein PA5023 OS=Pseudomonas aeruginosa GN=PA5023 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.460e-22 Identity = 65/165 (39.39%), Postives = 94/165 (56.97%), Query Frame = -3 Query: 259 FMDEYQA----IMTKKLGL---PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 732 F+ YQA +M ++LGL + + ++ +LL M VDY+ FFR L PE L L+ +D +EA+ W +Y + + G E R+ M++VNP YVLRNYL Q AI+AAE GD+ EVR L +++ RP++EQPGME++ R PP W Sbjct: 323 FLPLYQAHYLDLMRRRLGLGVAAENDHALVQELLQRMQGSAVDYSLFFRRLGE-----ETPE-RALASLRDDFVD-----REAFDRWAEAYRRRVEEEGGDQESRRRRMHAVNPLYVLRNYLAQQAIEAAEQGDYTEVRLLHQVLSRPFEEQPGMERFTRRPPDW 476
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y494_PSEU2 (UPF0061 protein Psyr_0494 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=Psyr_0494 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.252e-22 Identity = 66/166 (39.76%), Postives = 99/166 (59.64%), Query Frame = -3 Query: 259 FMDEYQA----IMTKKLGLP---KYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQEL-LSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 732 F+ YQA +M ++LGL + ++Q++S+LL M VDYT FFR L + P E L L+ +DI + + W +Y + L + +++ER+ M++VNP Y+LRNYL Q+AI AAE GD+ EVRRL +++ P+ EQPGM+ YA+ PP W Sbjct: 323 FLPLYQAHYLDLMRRRLGLTVAHEQDEQLVSQLLKLMQNSGVDYTLFFRRLGDQ------PAAEALRTLRDDFVDI-----KGFDGWAQAYQARIALENNGTEQERQTRMHAVNPLYILRNYLAQNAIAAAEKGDYAEVRRLHQVLCTPFTEQPGMQGYAQRPPDW 477
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y5760_PSEA7 (UPF0061 protein PSPA7_5760 OS=Pseudomonas aeruginosa (strain PA7) GN=PSPA7_5760 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.247e-22 Identity = 65/165 (39.39%), Postives = 96/165 (58.18%), Query Frame = -3 Query: 259 FMDEYQA----IMTKKLGLP---KYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 732 F+ YQA +M ++LGL + ++ ++ +LL M VDY+ FFR L PE + L L+ +D +EA+ W +Y + + + G R+ M++VNP YVLRNYL Q AI+AAE GD+ EVR L +L+ RP++EQPGME++ R PP W Sbjct: 323 FLPLYQAHYLDLMRRRLGLGVAVENDQALVQELLQRMQGSAVDYSLFFRRLGE-----DAPE-QALARLRDDFVD-----REAFDRWGEAYRRRVEAEGGEQAARRQRMHAVNPLYVLRNYLAQQAIEAAEQGDYTEVRLLHRLLARPFEEQPGMERFTRRPPDW 476
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y039_VIBVU (UPF0061 protein VV1_0039 OS=Vibrio vulnificus GN=VV1_0039 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.546e-22 Identity = 65/160 (40.62%), Postives = 90/160 (56.25%), Query Frame = -3 Query: 259 YQAIMTKKLGL---PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYI-QELLSSGI--SDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 720 + +M +KLGL + + ++ + + +A + DYT FFR LS + EDE V + L I ++ W+S L + E +SG S ++R M +VNPKY+LRNYL Q AID A+ GDF EV L KL++ PYDEQ ME YA LPP W Sbjct: 330 FSQLMRQKLGLLSQQEGDSELFNAMFALLAENHTDYTRFFRTLSQLDR-----EDEQTV----IDLFIDRDAAHGWLSRYLERVAMEQTASGEAKSAQQRCEQMRAVNPKYILRNYLAQQAIDKAQQGDFSEVHTLAKLLKNPYDEQAEMEAYAHLPPEW 480
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y558_PSEMY (UPF0061 protein Pmen_0558 OS=Pseudomonas mendocina (strain ymp) GN=Pmen_0558 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.244e-22 Identity = 64/166 (38.55%), Postives = 93/166 (56.02%), Query Frame = -3 Query: 259 FMDEYQA----IMTKKLGLPKY---NKQIISKLLNNMAVDKV-DYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 732 F+ YQA +M K+LGL ++ ++ +LL M K DY+ FFR L P D L V ++ +D+ + +W Y+ G +ER+A M++VNP Y+LRNYL Q I+AAE GD+G VR L ++ RP+DEQPGM++YA+ PP W Sbjct: 323 FLPLYQAHYLDLMRKRLGLTSAEDDDEALVQRLLQLMQQGKATDYSLFFRQLGE-----QAPADALQV-VRNDFVDLA-----GFDAWGRDYLARCEREGQQQDERRARMHAVNPLYILRNYLAQQVIEAAEAGDYGPVRELHAVLSRPFDEQPGMQRYAQRPPEW 477
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y1735_HERAR (UPF0061 protein HEAR1735 OS=Herminiimonas arsenicoxydans GN=HEAR1735 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.461e-22 Identity = 60/162 (37.04%), Postives = 88/162 (54.32%), Query Frame = -3 Query: 256 FMDEYQAIMTKKLGLPKYNK---QIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 732 + +++ +M KLGL ++ L + D+T FFR L ++ + + L + + LD + A+ W L Y L D+ RK M++VNPKYVLRNYL Q AI+ A+ DF EV +LL+++E+P+DEQP EKYA LPP WA Sbjct: 339 YAEKFAELMRAKLGLQTQQPDDGKLFDALFAVLQGSHADFTLFFRRLGELRIGQAASREAL----RDLFLD-----RAAFDDWALQYELRLQLENSDDDARKLAMHAVNPKYVLRNYLAQIAIEKAQNKDFSEVAKLLQVLEKPFDEQPENEKYAALPPDWA 491
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y486_PSEF5 (UPF0061 protein PFL_0486 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=PFL_0486 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.236e-21 Identity = 63/166 (37.95%), Postives = 96/166 (57.83%), Query Frame = -3 Query: 259 FMDEYQA----IMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEE-RKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 732 F+ YQA +M ++LG + +++++ +LL M VDY+ FFR L PE + L L+ +D + + +W Y + + I ++ R+A M++VNP Y+LRNYL Q AIDAAE GD+ EVRRL +++ RP++EQPGM+ YA PP W Sbjct: 323 FLPLYQAHYLDLMRRRLGFTQAEDDDQKLVERLLQLMQNSGVDYSLFFRRLGE-----HAPE-QALARLRDDFVD-----RNGFDAWAELYRERVARDPIQGQDLRRARMHAVNPLYILRNYLAQKAIDAAEAGDYSEVRRLHQVLSRPFEEQPGMDSYAERPPEW 477
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y369_PSEE4 (UPF0061 protein PSEEN0369 OS=Pseudomonas entomophila (strain L48) GN=PSEEN0369 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.108e-21 Identity = 63/165 (38.18%), Postives = 89/165 (53.94%), Query Frame = -3 Query: 259 FMDEYQA----IMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 732 F+ YQA +M ++LGL ++ +LL M VDYT FFR L P E L ++ +D+ + +W + Y+ + E R+ M +VNP YVLRNYL Q AI+AAE GD+ EVRRL +++ RP++EQPGM+ YA PP W Sbjct: 323 FLPLYQAHYLDLMRRRLGLTTAEDDDMALVERLLQRMQSGGVDYTLFFRKLGER------PVAEALKVVRDDFVDLA-----GFDAWGVEYLARCEREPGNAEGRRERMQAVNPLYVLRNYLAQKAIEAAEAGDYSEVRRLHQVLSRPFEEQPGMQAYAERPPEW 476
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y2793_FLAJ1 (UPF0061 protein Fjoh_2793 OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=Fjoh_2793 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.108e-21 Identity = 63/172 (36.63%), Postives = 92/172 (53.49%), Query Frame = -3 Query: 256 KIGTKFMDE----YQAIMTKKLGL---PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLD-IGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 747 KI FMD+ Y+ + KLGL + + +I L + + + D T FFR LS+VK S+ + + ++ + E +AW W Y+ L + +SDE R MN +NPKYVLRNY+ Q AIDAA+ D+ V L L+++PYDEQP +K+ P WA Sbjct: 338 KILESFMDDFILDYKEMFLNKLGLFTSTETDNDLIDNLEAVLQLTETDMTIFFRNLSSVKKTDSVEKAIEKIQFAFYKIEEVSGEILDAWKKWFSVYLDRLNAEVLSDEVRLQKMNLINPKYVLRNYMAQLAIDAADKEDYSLVNELYTLLQKPYDEQPEYQKWFAKRPDWA 509 The following BLAST results are available for this feature:
BLAST of CN189422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189422 ID=CN189422; Name=CN189422; organism=Citrus sinensis; type=EST; length=764bpback to top |