CN189422
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y2131_KLEP7 (UPF0061 protein KPN78578_21310 OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=KPN78578_21310 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.259e-14 Identity = 58/171 (33.92%), Postives = 83/171 (48.54%), Query Frame = -3 Query: 250 MDEYQ-AIMTK-------KLGL---PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWAYR 729 +DEYQ A++T KLGL K + ++ L M +K DYT FR LS+ + + PL+ +D + A+ SW Y L + D +R+ M VNP VLRN+L Q AI+ AE GD GE+ RL + P+ ++ + Y R PP W R Sbjct: 316 LDEYQHALLTAYGQRMRDKLGLFSQQKGDNDLLDGLFALMIREKSDYTRTFRLLSHSE------QLSAASPLRDEFID-----RAAFDSWFAGYRARLRDEQVDDAQRQQRMQGVNPALVLRNWLAQRAIEQAEAGDMGELERLHAALADPFTDRE--DDYVRRPPDWGKR 473
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y3822_GEMAT (UPF0061 protein GAU_3822 OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=GAU_3822 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.257e-14 Identity = 52/167 (31.14%), Postives = 82/167 (49.10%), Query Frame = -3 Query: 256 GTKFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLD--IGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 741 G F+ ++A+ K G + +I++ M +D+T FFRAL + A ++ + + L V D + +A +W+ + + R+ M++VNP +VLRNY+ Q AIDAA GD +VR LL+++ RPYDEQP P WA Sbjct: 345 GDVFLVAHEAMQAAKFGFVRQGPDEDALITEAFALMERVDIDFTRFFRALGDAPA--ALGDASAVTVLGDVFYDATLRDTHADALTAWLRRWHVAVGRQRPDAATRRTAMHAVNPWFVLRNYVAQQAIDAATAGDPSQVRLLLEVLRRPYDEQPEHAALVARRPEWA 509
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: YDIU_SALPC (UPF0061 protein ydiU OS=Salmonella paratyphi C (strain RKS4594) GN=ydiU PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.112e-13 Identity = 51/163 (31.29%), Postives = 82/163 (50.31%), Query Frame = -3 Query: 250 MDEYQAIMTKKLGL---PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWAYR 729 + Y M +KLG K + ++++L + MA + DY+ FR LS+ + + PL+ +D + A+ +W Y L + + D R+ M VNP VLRN+L Q AIDAAE GD E+ L +++ +P+ ++ + YA PP W R Sbjct: 324 LTHYGQRMRQKLGFFTEQKDDNVLLNELFSLMAREGSDYSRTFRMLSHTE------QQSASSPLRDTFID-----RAAFDAWFDRYRARLRTEAVDDALRQQQMQRVNPAVVLRNWLAQRAIDAAEQGDMAELHWLHEVLRQPFTDRD--DDYASRPPEWGKR 473
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: YDIU_SALCH (UPF0061 protein ydiU OS=Salmonella choleraesuis GN=ydiU PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.112e-13 Identity = 51/163 (31.29%), Postives = 82/163 (50.31%), Query Frame = -3 Query: 250 MDEYQAIMTKKLGL---PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWAYR 729 + Y M +KLG K + ++++L + MA + DY+ FR LS+ + + PL+ +D + A+ +W Y L + + D R+ M VNP VLRN+L Q AIDAAE GD E+ L +++ +P+ ++ + YA PP W R Sbjct: 324 LTHYGQRMRQKLGFFTEQKDDNVLLNELFSLMAREGSDYSRTFRMLSHTE------QQSASSPLRDTFID-----RAAFDAWFDRYRARLRTEAVDDALRQQQMQRVNPAVVLRNWLAQRAIDAAEQGDMAELHWLHEVLRQPFTDRD--DDYASRPPEWGKR 473
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: SELO_MOUSE (Selenoprotein O OS=Mus musculus GN=Selo PE=1 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 2.112e-13 Identity = 45/112 (40.18%), Postives = 61/112 (54.46%), Query Frame = -3 Query: 256 DIGKERKEAWISWVLSYIQEL--LSSGISDE-----ERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPY---DEQPGME----------KYARLPPAWA 531 D+ ++ ++ W +W+ Y L G+ D ER +M + NPKYVLRNY+ Q AI+AAE GDF EVR +LKL+E PY +E G E Y+ PP WA Sbjct: 547 DLQRKNRDHWEAWLQEYRDRLDKEKEGVGDTAAWQAERVRVMRANNPKYVLRNYIAQKAIEAAENGDFSEVRLVLKLLESPYHSEEEATGPEAVARSTEEQSSYSNRPPLWA 658
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y2105_ENTS8 (UPF0061 protein ESA_02105 OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=ESA_02105 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.759e-13 Identity = 53/158 (33.54%), Postives = 76/158 (48.10%), Query Frame = -3 Query: 259 EYQAIMTKKLGLP---KYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 723 E+ M KLG + + + +LL MA + DYT FR LS + S PL+ +D + + +W Y L G D+ R+ LM SVNP VLRN+L Q AI+AAE D E+ RLL+ + P+ ++ + Y PP W Sbjct: 328 EWGRQMRAKLGFTVEKEGDNDYLRELLTLMAREGSDYTRTFRMLSETEQHSSAS------PLRDEFID-----RATFDAWFARYRARLEEEGEEDDARQRLMKSVNPALVLRNWLAQRAIEAAERDDASELSRLLEALRNPFADRD--DDYTHRPPDW 472
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: SELO_DANRE (Selenoprotein O OS=Danio rerio GN=selo PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 3.603e-13 Identity = 51/144 (35.42%), Postives = 71/144 (49.31%), Query Frame = -3 Query: 244 LNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELL---SSGIS----DEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWAYRPG 654 L M D+ + LS +K E++L V + E W W+ Y Q L SG+ ER +MN+ NP VLRNY+ Q+AI AAE GDF EV+R+LK++E+P+ Q G+E+ P W R G Sbjct: 520 LFQMISDRGTVSRQLERLSRLKELMDTTEEQLRV-----------KHTEHWSDWIQKYRQRLARECESGVDVKDVQTERVRVMNNNNPHVVLRNYIAQNAIAAAENGDFSEVQRVLKVLEKPFSVQEGLEQ-----PGWMGRGG 647
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y1992_XYLFT (UPF0061 protein PD_1992 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=PD_1992 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-13 Identity = 49/140 (35.00%), Postives = 72/140 (51.43%), Query Frame = -3 Query: 256 QIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWI-SWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 672 ++ L M ++D T F L++ +P++P D L + +A + ++ + + W+ Y L + ER M NP+YVLRNYL Q AI+ AE GD E+ LL++M RPYD Q G E YA P WA Sbjct: 370 ELFDALRTCMHQAEMDMTLTFLGLADW--EPNMP-DSLSLWAEAFYDPVKRDAQAPMLRDWLQRYAARLSVDPLPVAERHERMRLANPRYVLRNYLTQQAIECAEQGDLTELHALLEVMRRPYDFQLGREAYAMRRPEWA 506
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y2619_XYLFA (UPF0061 protein XF_2619 OS=Xylella fastidiosa GN=XF_2619 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.027e-13 Identity = 49/140 (35.00%), Postives = 72/140 (51.43%), Query Frame = -3 Query: 256 QIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWI-SWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 672 ++ L M ++D T F L++ +P++P D L + +A + ++ + + W+ Y L + ER M NP+YVLRNYL Q AI+ AE GD E+ LL++M RPYD Q G E YA P WA Sbjct: 370 ELFDALRTCMHQAEMDMTLTFLGLADW--EPNMP-DSLSLWAEAFYDPVKRDAQAPMLRDWLQRYAARLSVDPLPVAERHERMRLANPRYVLRNYLTQQAIECAEQGDLIELHALLEVMRRPYDFQLGREAYAMRRPEWA 506
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y407_SHEFN (UPF0061 protein Sfri_0407 OS=Shewanella frigidimarina (strain NCIMB 400) GN=Sfri_0407 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.048e-12 Identity = 54/178 (30.34%), Postives = 85/178 (47.75%), Query Frame = -3 Query: 259 KFMDEYQAIMTKKLGLPKYNK------------------QIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAEL-GDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 735 + + +Y +M KLG + N+ Q++ +L + +++DYTN R + DPS L + ++D+ + W S + E+ ER NS NPKY+LRNYL Q AI A E GD ++ +L +L++RP+DEQ ME +A+ PP W Sbjct: 318 ELVQQYLLLMRAKLGFSQPNQSPNAINAEEQADLGNKDLQLVGQLTGLLETNQLDYTNSLRRFGQL--DPSSAHSSL----RDDMVDLAGF--DTWYQAYQSRVGEVADVNAWQCER----NSANPKYILRNYLAQEAIIAIEENGDNSKLLQLQQLLQRPFDEQSEMEDFAKRPPQW 483 The following BLAST results are available for this feature:
BLAST of CN189422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189422 ID=CN189422; Name=CN189422; organism=Citrus sinensis; type=EST; length=764bpback to top |