CN189422
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y2395_RHOFD (UPF0061 protein Rfer_2395 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=Rfer_2395 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.859e-18 Identity = 61/172 (35.47%), Postives = 91/172 (52.91%), Query Frame = -3 Query: 256 TKFMDEYQAIMTKKLGL-------PKYNKQIISKLLNNMAVDKVDYTNFFRALSN--VKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQEL--LSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 738 T F ++ +M KLGL ++ ++ +L +A ++VDYT F+R LS+ V D D L + + +AW+ L Y + L + G++ + LM NPK+VLRNYL + AI AA+L DF +V LL L+E P++E PG +KYA PP WA Sbjct: 333 TVFPAAFERLMFAKLGLLDASDSTATVDRALLQDILQLLAREQVDYTIFWRRLSHCGVATDAQTVRD----------LFVDRSAADAWL---LRYSERLEHIPQGLAAD----LMLKTNPKFVLRNYLGEQAIQAAKLKDFSQVETLLMLLESPFEEHPGFDKYADFPPDWA 487
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y1931_VIBCH (UPF0061 protein VC_1931 OS=Vibrio cholerae GN=VC_1931 PE=3 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 4.859e-18 Identity = 61/163 (37.42%), Postives = 87/163 (53.37%), Query Frame = -3 Query: 259 YQAIMTKKLGLPKYNK---QIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQ----ELLSSG--ISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 720 + +M KLGL + ++ + +A + DYT F R LS + + E ++ L +LD +EA +W+ Y++ EL G IS ER M VNPKY+LRNYL Q AI+ AE GDF E++RL ++ PY E P E+YA+LPP W Sbjct: 329 FSRLMRAKLGLATQQEGDGELFADFFALLANNHTDYTRFLRELSCLDRQGN----EAVIDL---VLD-----REAAKTWLTRYLERAARELGQEGRPISTRERCQAMRQVNPKYILRNYLAQQAIEFAERGDFEEMQRLATVLASPYAEHPEFERYAKLPPEW 479
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y2336_BURP0 (UPF0061 protein BURPS1106A_2336 OS=Burkholderia pseudomallei (strain 1106a) GN=BURPS1106A_2336 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.414e-17 Identity = 58/168 (34.52%), Postives = 85/168 (50.60%), Query Frame = -3 Query: 256 GKIGTKFMDEYQAIMTKKLGLP---KYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 750 G+ +F + M KLGL + + + ++LL M D+T FR L+ V + + P++ + +D ++A+ W Y L D R A MN VNPKYVLRN+L ++AI A+ DF EV RL ++ RP+DEQ + YA LPP WA Sbjct: 354 GRFPEQFGPALERAMRAKLGLALEREGDAALANQLLEIMDASHADFTLTFRHLARVSKHDARGD----APVRDLFID-----RDAFDRWANLYRARLSEEARDDASRAAAMNRVNPKYVLRNHLAETAIRRAKEKDFSEVERLAAVLRRPFDEQLEHDAYAALPPDWA 512
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y2284_XANCP (UPF0061 protein XCC2284 OS=Xanthomonas campestris pv. campestris GN=XCC2284 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.414e-17 Identity = 63/169 (37.28%), Postives = 84/169 (49.70%), Query Frame = -3 Query: 256 KFMDEYQAIMTK----KLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWI--SWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 735 +F D Y A + KLGL + + +I L M ++D T FR L V P P+ +L + D K +A +W+ Y L G SD R + M + NP+YVLRNYL Q AID AE GD V LL++M+RPYD+QP E +A P WA Sbjct: 342 QFRDTYLACDRRDTAAKLGLAECQDEDLHLIDDLRALMREAEMDMTLTFRGL--VDLSPQQPDASVL---REAFYDETKRAAQAPALGAWLQRYAARCLQDGASDAVRASRMRAANPRYVLRNYLAQQAIDQAEQGDLSGVHALLEVMQRPYDDQPRRESFAAKRPDWA 505
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y1894_XANCB (UPF0061 protein xcc-b100_1894 OS=Xanthomonas campestris pv. campestris (strain B100) GN=xcc-b100_1894 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.414e-17 Identity = 63/169 (37.28%), Postives = 84/169 (49.70%), Query Frame = -3 Query: 256 KFMDEYQAIMTK----KLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWI--SWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 735 +F D Y A + KLGL + + +I L M ++D T FR L V P P+ +L + D K +A +W+ Y L G SD R + M + NP+YVLRNYL Q AID AE GD V LL++M+RPYD+QP E +A P WA Sbjct: 342 QFRDTYLACDRRDTAAKLGLAECQDEDLHLIDDLRALMREAEMDMTLTFRGL--VDLSPQQPDASVL---REAFYDETKRAAQAPALGAWLQRYAARCLQDGASDAVRASRMRAANPRYVLRNYLAQQAIDQAEQGDLSGVHALLEVMQRPYDDQPRRESFAAKRPDWA 505
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y1831_XANC8 (UPF0061 protein XC_1831 OS=Xanthomonas campestris pv. campestris (strain 8004) GN=XC_1831 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.414e-17 Identity = 63/169 (37.28%), Postives = 84/169 (49.70%), Query Frame = -3 Query: 256 KFMDEYQAIMTK----KLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWI--SWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 735 +F D Y A + KLGL + + +I L M ++D T FR L V P P+ +L + D K +A +W+ Y L G SD R + M + NP+YVLRNYL Q AID AE GD V LL++M+RPYD+QP E +A P WA Sbjct: 342 QFRDTYLACDRRDTAAKLGLAECQDEDLHLIDDLRALMREAEMDMTLTFRGL--VDLSPQQPDASVL---REAFYDETKRAAQAPALGAWLQRYAARCLQDGASDAVRASRMRAANPRYVLRNYLAQQAIDQAEQGDLSGVHALLEVMQRPYDDQPRRESFAAKRPDWA 505
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y1045_ALHEH (UPF0061 protein Mlg_1045 OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=Mlg_1045 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.414e-17 Identity = 60/155 (38.71%), Postives = 86/155 (55.48%), Query Frame = -3 Query: 268 YQAIMTKKLGLPKYNK---QIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAA-ELGDFGEVRRLLKLMERPYDEQPGMEKYARLP 720 + A + KLGL + + + +LL+ MA + D+T FRALS+ + D P++ P + R EA W +IQ L G + R+A M +VNPK++LRN+L Q A+DAA E GDFG + RLL+++ RPYD QP E A P Sbjct: 337 HHARLRAKLGLAESRRGDIDLAHELLDLMARQQADFTQVFRALSDERMDD--PDEG---PARRCFA-----RPEALDGWRARWIQRLRQEGRPEPARQAAMRAVNPKFILRNHLAQWAVDAATERGDFGPMDRLLQVLTRPYDPQPEAEALAAPP 481
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y2277_BORA1 (UPF0061 protein BAV2277 OS=Bordetella avium (strain 197N) GN=BAV2277 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.411e-17 Identity = 63/166 (37.95%), Postives = 84/166 (50.60%), Query Frame = -3 Query: 256 TKFMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLD--IGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 738 T F + A M KLGL + ++ ++ LL M + D+T FRAL+ + P LD I +E +AW S + + G + R M+ VNP YVLRN+L + AI AA+ GD E+ RLL L+ RPYD QPG E YA LPP WA Sbjct: 330 TLFTQAFHARMGAKLGLSVWQSDDEALLDDLLRLMHDSRADFTLTFRALAQAVRGQTQP-----------FLDYFIDREAAQAWWSRLAA---RHACDGRAAAVRAEGMDRVNPLYVLRNHLAEQAIRAAQQGDASEIDRLLGLLRRPYDLQPGAEAYAALPPDWA 481
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y2155_BURXL (UPF0061 protein Bxeno_A2155 OS=Burkholderia xenovorans (strain LB400) GN=Bxeno_A2155 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.149e-17 Identity = 59/168 (35.12%), Postives = 84/168 (50.00%), Query Frame = -3 Query: 256 GKIGTKFMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 750 G +F + M KLGL + + ++L M ++ D+T FR L+ V + + A + D+ +R A+ +WV Y L D R MN VNPK+VLRN+L ++AI A+ DF EV RL ++ RP+DEQP E YA LPP WA Sbjct: 351 GGFKDRFAPALERRMRAKLGLETERAGDDALANRLFEVMHANRADFTLTFRNLARVSKHDASGD--------AAVRDLFLDRA-AFDAWVNDYRARLSEETREDAARAIAMNRVNPKFVLRNHLAETAIRRAKEKDFSEVERLAAVLRRPFDEQPEHEAYAGLPPDWA 509
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y2589_XANC5 (UPF0061 protein XCV2589 OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=XCV2589 PE=3 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 4.113e-17 Identity = 63/169 (37.28%), Postives = 83/169 (49.11%), Query Frame = -3 Query: 256 KFMDEYQAIMTK----KLGLPKYNK---QIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEA--WISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 735 +F D Y A + KLGL + Q+I L M ++D T FR L ++ PE L+ D K +A W+ Y L +S EER+A M NP+YVLRNYL Q AID AE GD V+ LL++M RPYD+Q G + +A P WA Sbjct: 342 RFRDTYLACDRRDTAAKLGLAECRDEDLQLIDALRALMRESEMDMTLTFRGLIDLS-----PEHPDPAQLRDAFYDEDKRLVDAPQLQQWLQRYAARLQQDPLSPEERRARMRLANPRYVLRNYLAQQAIDRAEQGDPSGVQELLEVMRRPYDDQHGRDAFAARRPDWA 505 The following BLAST results are available for this feature:
BLAST of CN189422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189422 ID=CN189422; Name=CN189422; organism=Citrus sinensis; type=EST; length=764bpback to top |