CN189408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS6B_ENCCU (26S protease regulatory subunit 6B homolog OS=Encephalitozoon cuniculi GN=ECU08_1970 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.874e-30 Identity = 66/151 (43.71%), Postives = 91/151 (60.26%), Query Frame = -2 Query: 274 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 726 +D+I TKRFD+ S DREVQR ++ELLNQ+DGF +KVI ATNRAD +DPAL+R GRLDRKIE P P + + + KM+++ V+ E L + + A + ++C EAGMLA+R V DF E +V + +Y Sbjct: 236 VDSIATKRFDASTSADREVQRVLIELLNQMDGFDPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPDRRQKRLVFNAITSKMSLNDSVDIESLVCRPEKISCADINSICQEAGMLAVRASRYMVTQRDFEEAYSKVVERSGTQPAFY 386
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.059e-30 Identity = 67/151 (44.37%), Postives = 88/151 (58.28%), Query Frame = -2 Query: 274 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 726 IDAI TKRFD++ DREVQR +LELLNQ+DGF +KVI ATNR D LDPAL+R GRLDRKIE P P + + +M + DV+ E+ D +GA + ++C EAGM A+R + V +D + V K +Y Sbjct: 263 IDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKNVVKKDTNDFEFY 413
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS6B_SCHPO (26S protease regulatory subunit 6B homolog OS=Schizosaccharomyces pombe GN=rpt3 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.184e-28 Identity = 67/153 (43.79%), Postives = 92/153 (60.13%), Query Frame = -2 Query: 271 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELP-HPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 726 IDAI TKRFD++ DREVQR ++ELL Q+DGF +KVI ATNRAD LDPAL+R GRLDRKIE P + R + Q + KM + P+V+ + D +GAQ+ A+ +AG+LA+R+ + D E +A K + +A Sbjct: 236 IDAIATKRFDAQTGADREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSDIEEA--YARAVKPTDMEQFA 386
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS6B_ASPNG (26S protease regulatory subunit 6B homolog OS=Aspergillus niger GN=tbpA PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.350e-27 Identity = 63/125 (50.40%), Postives = 84/125 (67.20%), Query Frame = -2 Query: 355 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARAR-ILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 726 IDAI TKRFD++ DREVQR +LELLNQ+DGF +KVI ATNRAD LDPAL+R GRLDRKIE P + R I + KM++ P+V+ + L + +GA + A+ EAG+ A+R++ Sbjct: 268 IDAIATKRFDAQTGADREVQRILLELLNQMDGFEQSSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFSTIASKMSLSPEVDLDSLIVRNEPLSGAVIAAIMQEAGLRAVRKN 392
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS6B_YEAST (26S protease regulatory subunit 6B homolog OS=Saccharomyces cerevisiae GN=RPT3 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.166e-26 Identity = 61/136 (44.85%), Postives = 86/136 (63.24%), Query Frame = -2 Query: 322 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARAR-ILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 726 +D+I TKRFD++ DREVQR ++ELL Q+DGF +KVI ATNRAD LDPAL+R GRLDRKIE P+ + R I + KM++ P+ + + L D +GA + A+ EAG+ A+R++ + D E Sbjct: 274 VDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPYLRDRRERRLIFGTIASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLEE 409
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH_CAPAN (Cell division protease ftsH homolog, chloroplastic (Fragment) OS=Capsicum annuum GN=FTSH PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.200e-25 Identity = 57/142 (40.14%), Postives = 93/142 (65.49%), Query Frame = -2 Query: 301 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 726 IDA+G +R G+ E ++T+ +LL ++DGFS + + V+AATNR D+LD AL+R G+ DR++ + P R RILQ+HSR + DV+F+++AR T F GA L+ + EA +LA RRD E++ ++ ++ + ++ A Sbjct: 331 IDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGKFDRQVTVDRPDVAGRVRILQVHSRGKALAKDVDFDKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIA 472
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH1_ORYSJ (Cell division protease ftsH homolog 1, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH1 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.900e-25 Identity = 56/142 (39.44%), Postives = 93/142 (65.49%), Query Frame = -2 Query: 301 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 726 IDA+G +R G+ E ++T+ +LL ++DGF+ + + V+AATNR D+LD AL+R GR DR++ + P R +IL++HSR + DV+FE++AR T F GA L+ + EA +LA RRD E++ ++ ++ + ++ A Sbjct: 333 IDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFAGNSGVIVLAATNRPDVLDAALLRPGRFDRQVTVDRPDVAGRVKILEVHSRGKALAKDVDFEKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIA 474
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH_TOBAC (Cell division protease ftsH homolog, chloroplastic OS=Nicotiana tabacum GN=FTSH PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 6.400e-25 Identity = 56/142 (39.44%), Postives = 93/142 (65.49%), Query Frame = -2 Query: 301 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 726 IDA+G +R G+ E ++T+ +LL ++DGFS + + V+AATNR D+LD AL+R GR DR++ + P R +ILQ+HSR + DV+FE++AR T + GA L+ + EA +LA RR+ E++ ++ ++ + ++ A Sbjct: 354 IDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRIKILQVHSRGKALTKDVDFEKIARRTPGYTGADLQNLMNEAAILAARRELKEISKDEISDALERIIA 495
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH1_ARATH (Cell division protease ftsH homolog 1, chloroplastic OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 6.400e-25 Identity = 56/142 (39.44%), Postives = 93/142 (65.49%), Query Frame = -2 Query: 301 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 726 IDA+G +R G+ E ++T+ +LL ++DGFS + + V+AATNR D+LD AL+R GR DR++ + P R +ILQ+HSR + DV+F+++AR T F GA L+ + EA +LA RR+ E++ ++ ++ + ++ A Sbjct: 363 IDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERIIA 504
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH4_SYNY3 (Cell division protease ftsH homolog 4 OS=Synechocystis sp. (strain PCC 6803) GN=slr1604 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.358e-25 Identity = 58/142 (40.85%), Postives = 90/142 (63.38%), Query Frame = -2 Query: 301 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 726 IDA+G +R G+ E ++T+ +LL ++DGF + I ++AATNR D+LD ALMR GR DR++ + P R IL +H+R T+ DV+ +++AR T F GA L + EA +LA RR+ TE++ ++ N+ I +V A Sbjct: 262 IDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNTGIIIVAATNRPDVLDSALMRPGRFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDLDKIARRTPGFTGADLSNLLNEAAILAARRNLTEISMDEVNDAIDRVLA 403 The following BLAST results are available for this feature:
BLAST of CN189408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 293
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189408 ID=CN189408; Name=CN189408; organism=Citrus sinensis; type=EST; length=727bpback to top |