CN189408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH2_ARATH (Cell division protease ftsH homolog 2, chloroplastic OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.287e-21 Identity = 58/165 (35.15%), Postives = 92/165 (55.76%), Query Frame = -2 Query: 262 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN----------EGIIQVQAKKKASLNYYA*TH 726 IDA+G +R G+ E ++T+ +LL ++DGF + + V+AATNRADILD AL+R GR DR++ + P + R IL++H+ DV+ E +A T F+GA L + EA +LA RR T ++ ++ + EG + K K+ + Y+ H Sbjct: 328 IDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAGRRARTSISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGH 492
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH8_ARATH (Cell division protease ftsH homolog 8, chloroplastic OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.293e-21 Identity = 58/165 (35.15%), Postives = 91/165 (55.15%), Query Frame = -2 Query: 262 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN----------EGIIQVQAKKKASLNYYA*TH 726 IDA+G +R G+ E ++T+ +LL ++DGF + + V+AATNRADILD AL+R GR DR++ + P + R IL++HS V+ E +A T F+GA L + EA +LA RR T ++ ++ + EG + K K+ + Y+ H Sbjct: 321 IDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHSGNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKTAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGH 485
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH2_SYNY3 (Cell division protease ftsH homolog 2 OS=Synechocystis sp. (strain PCC 6803) GN=slr1390 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.293e-21 Identity = 55/142 (38.73%), Postives = 82/142 (57.75%), Query Frame = -2 Query: 301 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 726 IDA+G +R G+ E ++T+ +LL ++DGF + I VIAATNR D+LD AL+R GR DR++ + +P + R IL IH++ +H +V +AR T F GA L V EA + RR + + N+ I +V A Sbjct: 312 IDAVGRQRGVGYGGGNDEREQTLNQLLTEMDGFEGNSGIIVIAATNRPDVLDLALLRPGRFDRQVTVDYPDVQGRELILAIHAQNKKLHEEVQLAAIARRTPGFTGADLANVLNEAAIFTARRRKEAITMAEVNDAIDRVVA 453
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH1_HAEIN (Cell division protease ftsH homolog 1 OS=Haemophilus influenzae GN=ftsH-A PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.293e-21 Identity = 55/135 (40.74%), Postives = 84/135 (62.22%), Query Frame = -2 Query: 322 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 726 IDA+G +R G E ++T+ ++L ++DGFS +D + VIAATNR D+LDPAL R GR DR++ + P + R +IL++H RK++V DV+ LAR T ++GA L + EA + A R + V +F + Sbjct: 252 IDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEK 386
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: AFG32_MOUSE (AFG3-like protein 2 OS=Mus musculus GN=Afg3l2 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.293e-21 Identity = 54/144 (37.50%), Postives = 85/144 (59.03%), Query Frame = -2 Query: 307 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARS----TDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 726 IDA+G KR G E + T+ +LL ++DGF++ + ++A TNR DILDPAL+R GR DR+I + P + RA I ++H R + + + ++LAR T F+GA + VC EA ++A R + +N + F + I +V Sbjct: 408 IDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAINEKHFEQAIERV 551
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH_TREPA (Cell division protease ftsH homolog OS=Treponema pallidum GN=ftsH PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.607e-21 Identity = 53/137 (38.69%), Postives = 88/137 (64.23%), Query Frame = -2 Query: 316 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI 726 +DAIG R ++ S D E ++T+ +LL ++DGF + + ++AATNR D+LDPAL+R GR DR++ + P + R IL+IH++ + + P+V+ + +AR T ++GA L V EA +LA+R +V D +E + Sbjct: 242 LDAIGKSRLNAIHSND-EREQTLNQLLVEMDGFDNTTGLILLAATNRPDVLDPALLRPGRFDRQVCVDRPDLKGREAILRIHAQNVKLAPEVDLKAVARITGGYSGADLANVVNEAALLAVRSGRAQVIETDLDEAV 377
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: SAV_SULAC (Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE=3 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 7.322e-21 Identity = 58/127 (45.67%), Postives = 78/127 (61.42%), Query Frame = -2 Query: 346 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATE 726 IDAI KR D V+G+ E +R + +LL +DG R+ VI ATNR D +DPAL R GR DR+IE+ P + R ILQ+H+R M + DV+ ++LA T + GA L A+ EA + ALRR E Sbjct: 314 IDAIAPKRED--VTGEVE-KRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALRRFVDE 437 HSP 2 Score: 90.8929 bits (224), Expect = 7.577e-18 Identity = 51/122 (41.80%), Postives = 78/122 (63.93%), Query Frame = -2 Query: 361 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 726 ID+I R S SG E R + +LL ++DG +++ +IAATNR DILDPAL+R GR DR I +P P + AR IL++H++ + + DV+ E++A + + GA L+A+ EA + A+R Sbjct: 589 IDSIAPIRGLSTDSGVTE--RIVNQLLAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGADLEALVREATINAMR 708
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: CDCH_HALSA (Protein cdcH OS=Halobacterium salinarium GN=cdcH PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.322e-21 Identity = 62/147 (42.18%), Postives = 86/147 (58.50%), Query Frame = -2 Query: 292 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEV--NHEDFNEGIIQVQAKKK 726 +D+I KR D V+G+ E +R + +LL +DG ++ VIAATNR D +DPAL R GR DR+IE+ P E R IL+IH+R M + DVN LA T F GA ++++ EA M ALRR E+ + ED +I K+ Sbjct: 291 LDSIAPKRED--VTGEVE-RRVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGREEILKIHTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRRYLPEIDLDEEDIPPSLIDRMIVKR 434 HSP 2 Score: 93.5893 bits (231), Expect = 1.169e-18 Identity = 51/132 (38.64%), Postives = 77/132 (58.33%), Query Frame = -2 Query: 304 EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR--RDATEVNHEDFNEGIIQVQ 693 + G+ +R + +LL +LDG + + VIAATNR DI+DPAL+RSGR DR +++ P E R +IL+IH++ + DV+ ELA D + G+ L + EA + ALR DA +V F + V+ Sbjct: 573 QTGGNNVSERVVNQLLTELDGLEEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAADVSLRELAERADGYVGSDLANIAREAAIEALRDDEDADDVGMAHFRAAMENVR 704
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH_RICBR (Cell division protease ftsH homolog OS=Rickettsia bellii (strain RML369-C) GN=ftsH PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.563e-21 Identity = 52/135 (38.52%), Postives = 84/135 (62.22%), Query Frame = -2 Query: 322 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 726 IDA+G R G+ E ++T+ ++L ++DGF +++ + +IAATNR D+LD AL+R GR DR+I + +P + R +ILQ+H +K+ + +AR T F+GA+L + EA ++A RR+ EV D E Sbjct: 256 IDAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDNALLRPGRFDRQITVSNPDIDGREKILQVHLKKVKYSTKIVPRIIARGTPGFSGAELANLVNEATLIAARRNKKEVEMHDLEE 390
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH_PORPU (Cell division protease ftsH homolog OS=Porphyra purpurea GN=ftsH PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.563e-21 Identity = 54/142 (38.03%), Postives = 84/142 (59.15%), Query Frame = -2 Query: 301 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 726 IDA+G +R G+ E ++T+ +LL ++DGF + + VIAATNRADILD AL+R GR DR++ + P R IL++H++ + V+ E +AR T F+GA L + EA +L RR + + + + I +V A Sbjct: 274 IDAVGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRADILDSALLRPGRFDRQVSVDVPDFRGRLAILEVHAKNKKMESKVSLETIARRTPGFSGADLANLLNEAAILTARRRKSAMTMSEIDTSIDRVVA 415 The following BLAST results are available for this feature:
BLAST of CN189408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 293
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189408 ID=CN189408; Name=CN189408; organism=Citrus sinensis; type=EST; length=727bpback to top |