CN189408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: AFG2_SCHPO (ATPase family gene 2 protein OS=Schizosaccharomyces pombe GN=afg2 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.563e-21 Identity = 59/155 (38.06%), Postives = 92/155 (59.35%), Query Frame = -2 Query: 271 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD--ATEVNHEDFNEGIIQV-QAKKKASLNYYA 726 IDA+ R + D R + LLN+LDG + + V+AATNR D++DPALMR GRLDR + + P+ EAR +I++I + KM DV+ + +A T+ +GA++ A+C EAG++A+ D A E+ F ++ + +A + L YYA Sbjct: 650 IDALTANRGE-----DNSSDRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQEAGLIAMHEDLEAKEICQAHFKTALLALRKAITRDMLEYYA 799 HSP 2 Score: 70.0922 bits (170), Expect = 1.384e-11 Identity = 46/124 (37.10%), Postives = 69/124 (55.65%), Query Frame = -2 Query: 358 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQ-IHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 726 IDA+ KR + + T+L LL DG ++ ++ VIAATNR + +D AL R GRL+++IE+ P + AR I++ + S D E+LA T + GA L AV EA + A++R Sbjct: 381 IDALAPKRTEDVSEAESRAVATLLTLL---DGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIKR 501
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH_SHIFL (Cell division protease ftsH OS=Shigella flexneri GN=ftsH PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.249e-20 Identity = 52/135 (38.52%), Postives = 84/135 (62.22%), Query Frame = -2 Query: 322 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 726 IDA+G +R G E ++T+ ++L ++DGF ++ I VIAATNR D+LDPAL+R GR DR++ + P R +IL++H R++ + PD++ +AR T F+GA L + EA + A R + V+ +F + Sbjct: 253 IDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEK 387
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH_ECOLI (Cell division protease ftsH OS=Escherichia coli (strain K12) GN=ftsH PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.249e-20 Identity = 52/135 (38.52%), Postives = 84/135 (62.22%), Query Frame = -2 Query: 322 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 726 IDA+G +R G E ++T+ ++L ++DGF ++ I VIAATNR D+LDPAL+R GR DR++ + P R +IL++H R++ + PD++ +AR T F+GA L + EA + A R + V+ +F + Sbjct: 253 IDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEK 387
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH_ECO57 (Cell division protease ftsH OS=Escherichia coli O157:H7 GN=ftsH PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.249e-20 Identity = 52/135 (38.52%), Postives = 84/135 (62.22%), Query Frame = -2 Query: 322 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 726 IDA+G +R G E ++T+ ++L ++DGF ++ I VIAATNR D+LDPAL+R GR DR++ + P R +IL++H R++ + PD++ +AR T F+GA L + EA + A R + V+ +F + Sbjct: 253 IDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEK 387
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH_HELPY (Cell division protease ftsH homolog OS=Helicobacter pylori GN=ftsH PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.631e-20 Identity = 57/139 (41.01%), Postives = 85/139 (61.15%), Query Frame = -2 Query: 316 IDAIGTKRF-DSEVSGDREVQRTMLELLNQLDGFSSDDR-IKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI 726 IDAIG R VSG+ E ++T+ +LL ++DGF S++ + V+AATNR +ILDPALMR GR DR++ + P R IL++H + + + DVN +E+A+ T GA L + EA +LA R + EV + E + Sbjct: 271 IDAIGKSRAAGGVVSGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKEVRQQHLKEAV 409
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH_HELPJ (Cell division protease ftsH homolog OS=Helicobacter pylori J99 GN=ftsH PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.130e-20 Identity = 56/139 (40.29%), Postives = 85/139 (61.15%), Query Frame = -2 Query: 316 IDAIGTKRF-DSEVSGDREVQRTMLELLNQLDGFSSDDR-IKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI 726 IDAIG R +SG+ E ++T+ +LL ++DGF S++ + V+AATNR +ILDPALMR GR DR++ + P R IL++H + + + DVN +E+A+ T GA L + EA +LA R + EV + E + Sbjct: 271 IDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKEVKQQHLKEAV 409
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: AFG31_MOUSE (AFG3-like protein 1 OS=Mus musculus GN=Afg3l1 PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 2.130e-20 Identity = 55/144 (38.19%), Postives = 81/144 (56.25%), Query Frame = -2 Query: 307 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKM----TVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 726 IDAIG KR + G E + T+ ++L ++DGF+S + V+A TNR DILDPAL R GR DR+I + P + R+ I ++H R + ++ D +LA T F GA + VC EA ++A R + V F + I +V Sbjct: 401 IDAIGRKRGRGHLGGQSEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERHFEQAIERV 544
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH_ODOSI (Cell division protease ftsH homolog OS=Odontella sinensis GN=ftsH PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.783e-20 Identity = 52/135 (38.52%), Postives = 80/135 (59.26%), Query Frame = -2 Query: 322 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 726 IDA+G +R G+ E ++T+ +LL ++DGF + + V+ ATNRADILD AL+R GR DR++ + P R IL++H+R + DV+ +LA T F+GA L + EA +LA R + + + NE Sbjct: 287 IDAVGRERGAGVGGGNDEREQTLNQLLTEMDGFKENKGVIVVGATNRADILDAALLRPGRFDRQVTVNLPDRLGRVGILKVHARNKPLGEDVSLVQLANRTPGFSGADLANLLNEAAILATRYKKSSITKNEVNE 421
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH_RICTY (Cell division protease ftsH homolog OS=Rickettsia typhi GN=ftsH PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.096e-20 Identity = 51/135 (37.78%), Postives = 83/135 (61.48%), Query Frame = -2 Query: 322 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 726 IDA+G R G+ E ++T+ ++L ++DGF +++ + +IAATNR D+LD AL+R GR DR+I + +P R +IL++H +K+ + V +AR T F+GA+L + EA ++A R EV+ D E Sbjct: 256 IDAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEE 390
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH_RICPR (Cell division protease ftsH homolog OS=Rickettsia prowazekii GN=ftsH PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.096e-20 Identity = 51/135 (37.78%), Postives = 83/135 (61.48%), Query Frame = -2 Query: 322 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 726 IDA+G R G+ E ++T+ ++L ++DGF +++ + +IAATNR D+LD AL+R GR DR+I + +P R +IL++H +K+ + V +AR T F+GA+L + EA ++A R EV+ D E Sbjct: 256 IDAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEE 390 The following BLAST results are available for this feature:
BLAST of CN189408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 293
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189408 ID=CN189408; Name=CN189408; organism=Citrus sinensis; type=EST; length=727bpback to top |