CN189408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH3_SYNY3 (Cell division protease ftsH homolog 3 OS=Synechocystis sp. (strain PCC 6803) GN=sll1463 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.356e-19 Identity = 55/144 (38.19%), Postives = 85/144 (59.03%), Query Frame = -2 Query: 301 IDAIGTKRFDSE-VSGDREVQRTMLELLNQLDGFSSDDR-IKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 726 +DAIG R + G+ E ++T+ +LL ++DGFS+ + V+AATNR + LDPAL+R GR DR++ + P R +IL+I+++K+ + +V + +A T F GA L + EA +LA R V DF E I +V A Sbjct: 275 LDAIGKSRASGAFMGGNDEREQTLNQLLTEMDGFSAAGATVIVLAATNRPETLDPALLRPGRFDRQVLVDRPDLAGRLKILEIYAKKIKLDKEVELKNIATRTPGFAGADLANLVNEAALLAARNKQDSVTEADFREAIERVVA 418
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: TERA_RAT (Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus GN=Vcp PE=1 SV=3) HSP 1 Score: 95.5153 bits (236), Expect = 3.076e-19 Identity = 51/132 (38.64%), Postives = 79/132 (59.85%), Query Frame = -2 Query: 334 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD-ATEVNHE 726 +D+I R + G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I +P P E++R IL+ + RK V DV+ E LA+ T+ F+GA L +C A LA+R +E+ E Sbjct: 579 LDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRE 710 HSP 2 Score: 90.5077 bits (223), Expect = 9.896e-18 Identity = 51/132 (38.64%), Postives = 78/132 (59.09%), Query Frame = -2 Query: 331 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 726 +DAI KR + G+ E +R + +LL +DG + V+AATNR + +DPAL R GR DR++++ P R ILQIH++ M + DV+ E++A T GA L A+C EA + A+R+ ++ ED Sbjct: 306 LDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: TERA_PIG (Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1 SV=5) HSP 1 Score: 95.5153 bits (236), Expect = 3.076e-19 Identity = 51/132 (38.64%), Postives = 79/132 (59.85%), Query Frame = -2 Query: 334 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD-ATEVNHE 726 +D+I R + G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I +P P E++R IL+ + RK V DV+ E LA+ T+ F+GA L +C A LA+R +E+ E Sbjct: 579 LDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRE 710 HSP 2 Score: 90.5077 bits (223), Expect = 9.896e-18 Identity = 51/132 (38.64%), Postives = 78/132 (59.09%), Query Frame = -2 Query: 331 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 726 +DAI KR + G+ E +R + +LL +DG + V+AATNR + +DPAL R GR DR++++ P R ILQIH++ M + DV+ E++A T GA L A+C EA + A+R+ ++ ED Sbjct: 306 LDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: TERA_MOUSE (Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp PE=1 SV=4) HSP 1 Score: 95.5153 bits (236), Expect = 3.076e-19 Identity = 51/132 (38.64%), Postives = 79/132 (59.85%), Query Frame = -2 Query: 334 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD-ATEVNHE 726 +D+I R + G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I +P P E++R IL+ + RK V DV+ E LA+ T+ F+GA L +C A LA+R +E+ E Sbjct: 579 LDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRE 710 HSP 2 Score: 90.5077 bits (223), Expect = 9.896e-18 Identity = 51/132 (38.64%), Postives = 78/132 (59.09%), Query Frame = -2 Query: 331 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 726 +DAI KR + G+ E +R + +LL +DG + V+AATNR + +DPAL R GR DR++++ P R ILQIH++ M + DV+ E++A T GA L A+C EA + A+R+ ++ ED Sbjct: 306 LDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: TERA_HUMAN (Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP PE=1 SV=4) HSP 1 Score: 95.5153 bits (236), Expect = 3.076e-19 Identity = 51/132 (38.64%), Postives = 79/132 (59.85%), Query Frame = -2 Query: 334 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD-ATEVNHE 726 +D+I R + G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I +P P E++R IL+ + RK V DV+ E LA+ T+ F+GA L +C A LA+R +E+ E Sbjct: 579 LDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRE 710 HSP 2 Score: 90.5077 bits (223), Expect = 9.896e-18 Identity = 51/132 (38.64%), Postives = 78/132 (59.09%), Query Frame = -2 Query: 331 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 726 +DAI KR + G+ E +R + +LL +DG + V+AATNR + +DPAL R GR DR++++ P R ILQIH++ M + DV+ E++A T GA L A+C EA + A+R+ ++ ED Sbjct: 306 LDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: TERA_BOVIN (Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.076e-19 Identity = 51/132 (38.64%), Postives = 79/132 (59.85%), Query Frame = -2 Query: 334 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD-ATEVNHE 726 +D+I R + G R + ++L ++DG S+ + +I ATNR DI+DPA++R GRLD+ I +P P E++R IL+ + RK V DV+ E LA+ T+ F+GA L +C A LA+R +E+ E Sbjct: 579 LDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRE 710 HSP 2 Score: 90.5077 bits (223), Expect = 9.896e-18 Identity = 51/132 (38.64%), Postives = 78/132 (59.09%), Query Frame = -2 Query: 331 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 726 +DAI KR + G+ E +R + +LL +DG + V+AATNR + +DPAL R GR DR++++ P R ILQIH++ M + DV+ E++A T GA L A+C EA + A+R+ ++ ED Sbjct: 306 LDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH_BUCBP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=ftsH PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.076e-19 Identity = 52/133 (39.10%), Postives = 81/133 (60.90%), Query Frame = -2 Query: 328 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 726 IDA+G +R G E ++T+ ++L ++DGF ++ I +IAATNR D+LDPAL+R GR DR+I + P R +I+Q+H +K+ + +V+ +AR T F+GA L + EA + A R + V DF Sbjct: 253 IDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQIFVALPDIRGREKIIQVHMKKVPLGNNVDPMIIARGTPGFSGADLANLVNEAALFAARNNRDVVMMSDF 385
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH2_HAEIN (Cell division protease ftsH homolog 2 OS=Haemophilus influenzae GN=ftsH-B PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.076e-19 Identity = 52/132 (39.39%), Postives = 81/132 (61.36%), Query Frame = -2 Query: 322 IGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 717 +G +R G E ++T+ ++L ++DGFS +D + VIAATNR D+LDPAL R GR DR++ + P + R +IL++H RK++V DV+ LAR T ++GA L + EA + A R + V +F + Sbjct: 1 MGRQRGAGLGGGHDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEK 132
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: TERA_DANRE (Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.018e-19 Identity = 48/122 (39.34%), Postives = 75/122 (61.48%), Query Frame = -2 Query: 361 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 726 +D+I R + G R + ++L ++DG SS + +I ATNR DI+DPA++R GRLD+ I +P P E++R IL+ + RK + DV+ + LA+ T+ F+GA L +C A LA+R Sbjct: 579 LDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIR 700 HSP 2 Score: 90.5077 bits (223), Expect = 9.896e-18 Identity = 51/132 (38.64%), Postives = 78/132 (59.09%), Query Frame = -2 Query: 331 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 726 +DAI KR + G+ E +R + +LL +DG + V+AATNR + +DPAL R GR DR++++ P R ILQIH++ M + DV+ E++A T GA L A+C EA + A+R+ ++ ED Sbjct: 306 LDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: CDAT_PLAF7 (Putative cell division cycle ATPase OS=Plasmodium falciparum (isolate 3D7) GN=PF07_0047 PE=3 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 5.248e-19 Identity = 55/148 (37.16%), Postives = 85/148 (57.43%), Query Frame = -2 Query: 292 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDA--TEVNHEDFNEGI-IQVQAKKK 726 ID+I KR S + +R + +LL +DG ++ + V+AATNR + +DPAL R GR DR+IE+P P E+ R IL ++KM + PDVN ++A+ + GA L +C EA + ++ +++ EDF E + I V KK Sbjct: 629 IDSIANKR---SKSNNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHIHFLDLDEEDFIEFMKISVDEDKK 773 HSP 2 Score: 71.633 bits (174), Expect = 4.757e-12 Identity = 40/116 (34.48%), Postives = 68/116 (58.62%), Query Frame = -2 Query: 379 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEA 726 ID++ +R +S + D R + ++L ++DG + I +IAATNR DILD AL R GRLD+ I + P ++R I + + ++ DV+ ++A+ T+ F+GA + +C A Sbjct: 1036 IDSLAKER-NSNTNNDAS-DRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSA 1149 The following BLAST results are available for this feature:
BLAST of CN189408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 293
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189408 ID=CN189408; Name=CN189408; organism=Citrus sinensis; type=EST; length=727bpback to top |