CN189408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS4_HUMAN (26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.129e-40 Identity = 81/145 (55.86%), Postives = 105/145 (72.41%), Query Frame = -2 Query: 292 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 726 IDAIGTKR+DS G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P E+ + RI QIH+ +MT+ DV ++L + DD +GA +KA+C EAG++ALR +V +EDF + V KK+ Sbjct: 287 IDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQ 431
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS4_CHICK (26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 7.043e-40 Identity = 79/135 (58.52%), Postives = 101/135 (74.81%), Query Frame = -2 Query: 322 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 726 IDAIGTKR+DS G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P E+ + RI QIH+ +MT+ DV +EL + DD +GA +KA+C EAG++ALR +V +EDF + Sbjct: 287 IDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS4_DICDI (26S protease regulatory subunit 4 homolog OS=Dictyostelium discoideum GN=psmC1 PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.049e-39 Identity = 79/146 (54.11%), Postives = 103/146 (70.55%), Query Frame = -2 Query: 289 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKA 726 IDA+GTKR+DS+ G+RE+QRTMLELLNQLDGF + +KVI ATNR + LDPAL+R GR+DRKIE P P + + +I +IH+ KM + DVN EE S DD +GA +KA+C E+G+LALR V H DF + +V +K A Sbjct: 286 IDAVGTKRYDSQSGGEREIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALRERRMRVTHTDFKKAKEKVLYRKTA 431
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.676e-39 Identity = 80/145 (55.17%), Postives = 103/145 (71.03%), Query Frame = -2 Query: 292 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 726 IDA+GTKR+DS G+RE+QRTMLELLNQLDGF S +KV+ ATNR + LDPAL+R GR+DRKIE P P E+ + RI QIH+ +MT+ +VN EE + D+ +GA +KA+C EAG+LALR V EDF + V +KK Sbjct: 290 IDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKSKENVLYRKK 434
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS10_DICDI (26S protease regulatory subunit S10B OS=Dictyostelium discoideum GN=psmC6 PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.328e-38 Identity = 76/145 (52.41%), Postives = 103/145 (71.03%), Query Frame = -2 Query: 292 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 726 IDAIG +RF S DRE+QRT++ELLNQ+DGF + ++K+I ATNR D+LDPAL+R GRLDRKIE+P P+E R +L+IH+ +T H DV++E +A+ D FN A L+ VC EAGM A+R + V EDF + + + Q KK Sbjct: 239 IDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMFAIRAERDYVMEEDFMKAVRKCQEAKK 383
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PS10A_ARATH (26S protease regulatory subunit 10B homolog A OS=Arabidopsis thaliana GN=RPT4A PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.959e-38 Identity = 76/152 (50.00%), Postives = 111/152 (73.03%), Query Frame = -2 Query: 274 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV-QAKKKASLNYY 726 IDAIG +RF S DRE+QRT++ELLNQLDGF + ++K+I ATNR D+LDPAL+R GRLDRKIE+P P+E++R IL+IH+ + H ++++E + + + FNGA L+ +C EAGM A+R + V HEDF + + ++ +AKK S ++Y Sbjct: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSSHY 392
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.865e-38 Identity = 76/152 (50.00%), Postives = 110/152 (72.37%), Query Frame = -2 Query: 274 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV-QAKKKASLNYY 726 IDAIG +RF S DRE+QRT++ELLNQLDGF ++K+I ATNR D+LDPAL+R GRLDRKIE+P P+E++R IL+IH+ + H ++++E + + + FNGA L+ +C EAGM A+R + V HEDF + + ++ +AKK S ++Y Sbjct: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSSHY 392
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS8_ENCCU (26S protease regulatory subunit 8 homolog OS=Encephalitozoon cuniculi GN=RPT6 PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.865e-38 Identity = 85/149 (57.05%), Postives = 102/149 (68.46%), Query Frame = -2 Query: 280 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN 726 ID+IG+ R DS D EVQRTMLELLNQLDGF S + IKVI ATNR DILDPAL+R+GR+DRKIE P P+E AR IL+IHSRKM + ++ E +A +GA++KAVC EAGM ALR V EDF + +V KK LN Sbjct: 298 IDSIGSTRGDSNKGSDSEVQRTMLELLNQLDGFESHNNIKVIMATNRIDILDPALLRTGRIDRKIEFPPPNESARLEILKIHSRKMNLTKGIDLETIASKMVGCSGAEVKAVCTEAGMYALRERRVHVTQEDFEMAVHKV-LKKTGDLN 445
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS8_MANSE (26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.592e-38 Identity = 81/143 (56.64%), Postives = 98/143 (68.53%), Query Frame = -2 Query: 298 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 726 ID+IG+ R +S GD EVQRTMLELLNQLDGF + IKVI ATNR DILDPAL+R GR+DRKIE P P+EEAR IL+IHSRKM + +N ++A +GA++K VC EAGM ALR V EDF + +V K Sbjct: 247 IDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 389
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS8_DROME (26S protease regulatory subunit 8 OS=Drosophila melanogaster GN=Pros45 PE=1 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 6.592e-38 Identity = 81/143 (56.64%), Postives = 98/143 (68.53%), Query Frame = -2 Query: 298 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 726 ID+IG+ R +S GD EVQRTMLELLNQLDGF + IKVI ATNR DILDPAL+R GR+DRKIE P P+EEAR IL+IHSRKM + +N ++A +GA++K VC EAGM ALR V EDF + +V K Sbjct: 250 IDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 392 The following BLAST results are available for this feature:
BLAST of CN189408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 293
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189408 ID=CN189408; Name=CN189408; organism=Citrus sinensis; type=EST; length=727bpback to top |