CN189408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: NVL_HUMAN (Nuclear valosin-containing protein-like OS=Homo sapiens GN=NVL PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17 Identity = 53/123 (43.09%), Postives = 71/123 (57.72%), Query Frame = -2 Query: 358 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 726 IDAI KR + +R + +L ++ L+ ++ R+ VI ATNR D LDPAL R+GR DR+I L P E +R RILQ RK+ + +F LA T F GA L A+C EA M A+ R Sbjct: 366 IDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNR 488 HSP 2 Score: 77.0258 bits (188), Expect = 1.132e-13 Identity = 54/168 (32.14%), Postives = 88/168 (52.38%), Query Frame = -2 Query: 277 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHP---DVNFEELARS--TDDFNGAQLKAVCVEAGMLALRRDAT-----------EVNHEDFNEGIIQVQA--KKKASLNY 726 +DA+ +R D E R + +LL ++DG + ++ ++AATNR DI+DPA++R GRLD+ + + P R IL+ ++ T P DVN E +A D + GA L A+ EA + ALR++ +V+H+ F E +V++ KK + Y Sbjct: 683 VDALCPRRSDRETGAS---VRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKVSHKHFEEAFKKVRSSISKKDQIMY 847
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: CDC48_YEAST (Cell division control protein 48 OS=Saccharomyces cerevisiae GN=CDC48 PE=1 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17 Identity = 48/140 (34.29%), Postives = 83/140 (59.29%), Query Frame = -2 Query: 313 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR--DATEVNHEDFNEGII 726 ID+I KR + +G+ E +R + +LL +DG + + VIAATNR + +DPAL R GR DR++++ P R +L+IH++ M + DV+ E LA T + GA + ++C EA M +R D +++ ++ + ++ Sbjct: 316 IDSIAPKR--DKTNGEVE-RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDEDEIDAEVL 452 HSP 2 Score: 82.4185 bits (202), Expect = 2.695e-15 Identity = 47/143 (32.87%), Postives = 77/143 (53.85%), Query Frame = -2 Query: 298 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 726 +D+I R S R + +LL ++DG ++ + VI ATNR D +DPA++R GRLD+ I +P P E AR IL RK + P + +A++T F+GA L + A A+ +D+ E + + E ++V+ + Sbjct: 589 LDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAI-KDSIEAHRQHEAEKEVKVEGE 730
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: CDC48_SCHPO (Cell division cycle protein 48 OS=Schizosaccharomyces pombe GN=cdc48 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.094e-16 Identity = 47/140 (33.57%), Postives = 84/140 (60.00%), Query Frame = -2 Query: 313 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR--DATEVNHEDFNEGII 726 ID+I KR + +G+ E +R + +LL +DG + + V+AATNR + +DPAL R GR DR++++ P R IL+IH++ M + DV+ E++A T + G+ L ++C EA M +R D +++ ++ + ++ Sbjct: 326 IDSIAPKR--EKTNGEVE-RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEIDAEVL 462 HSP 2 Score: 86.6557 bits (213), Expect = 1.429e-16 Identity = 54/121 (44.63%), Postives = 73/121 (60.33%), Query Frame = -2 Query: 322 GDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 684 GDR V +LL ++DG +S + VI ATNR D +DPALMR GRLD+ I +P P EEAR ILQ R V DV+ +A++T F+GA L+ V A LA+ +D+ E + + NE Sbjct: 616 GDRVVN----QLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAI-KDSIEEDIKRENE 731
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH9_ORYSJ (Cell division protease ftsH homolog 9, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH9 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.429e-16 Identity = 48/109 (44.04%), Postives = 67/109 (61.47%), Query Frame = -2 Query: 400 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQL 726 IDA+G+ R E ++T+ +LL ++DGF ++ I V+AATN DILDPAL R GR DR I +P+P R IL+++ + V DV+ +ARST FNGA L Sbjct: 429 IDAVGSTRKQWE----GHTKKTLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPVSSDVDVNAIARSTPGFNGADL 533
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: YB7A_SCHPO (Uncharacterized AAA domain-containing protein C16E9.10c OS=Schizosaccharomyces pombe GN=SPBC16E9.10c PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.866e-16 Identity = 48/130 (36.92%), Postives = 80/130 (61.54%), Query Frame = -2 Query: 340 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDR-IKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVN 726 IDA+ KR ++ +R + L +++L +D + + VI ATNR D LD AL R+GR DR+I L PS++AR +IL+ ++ + + D +F +LA+ T + GA LKA+ AG++A++R E++ Sbjct: 276 IDAVTPKRESAQREMERRIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIKRIFNEIS 405 HSP 2 Score: 81.2629 bits (199), Expect = 6.004e-15 Identity = 49/124 (39.52%), Postives = 71/124 (57.26%), Query Frame = -2 Query: 361 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARS--TDDFNGAQLKAVCVEAGMLALR 726 +DA+ +R DS V T LL +LDG S + VIAATNR DI+DPA++R GRLD+ + + P R IL+ +++ +H +VN + L R +F+GA L A+ EA + ALR Sbjct: 594 LDAMVPRRDDSLSEASSRVVNT---LLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEVNLDVLGRDERCSNFSGADLAALVREAAVTALR 714
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: ATAD2_PONAB (ATPase family AAA domain-containing protein 2 OS=Pongo abelii GN=ATAD2 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.438e-16 Identity = 47/99 (47.47%), Postives = 59/99 (59.60%), Query Frame = -2 Query: 358 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHP-DVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 651 LL +DG S I VI ATNR D +DPAL R GR DR+ P +EAR IL+IH+R P D EELA + + GA +K++C EA + ALRR Sbjct: 386 LLALMDGLDSRGEIVVIGATNRLDAIDPALRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCVGYRGADIKSICAEAALCALRR 484
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: TERA1_CAEEL (Transitional endoplasmic reticulum ATPase homolog 1 OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.184e-16 Identity = 50/132 (37.88%), Postives = 76/132 (57.58%), Query Frame = -2 Query: 331 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 726 IDAI KR + +G+ E +R + +LL +DG + VIAATNR + +D AL R GR DR+I++ P R IL+IH++ M + DV+ E++A F GA L ++C EA + +R ++ ED Sbjct: 312 IDAIAPKR--EKTNGEVE-RRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLED 440 HSP 2 Score: 83.1889 bits (204), Expect = 1.580e-15 Identity = 41/102 (40.20%), Postives = 66/102 (64.71%), Query Frame = -2 Query: 361 RTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 666 R + ++L ++DG ++ + +I ATNR DI+DPA++R GRLD+ I +P P E +R +IL+ RK + D++ LA++T F+GA L +C A LA+R Sbjct: 606 RVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIR 707
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: TERA2_CAEEL (Transitional endoplasmic reticulum ATPase homolog 2 OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 4.158e-16 Identity = 44/122 (36.07%), Postives = 71/122 (58.20%), Query Frame = -2 Query: 361 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 726 +D+I R S R + ++L ++DG ++ + +I ATNR DI+DPA++R GRLD+ I +P P E +R +I + RK + D++ LA++T F+GA L +C A LA+R Sbjct: 584 LDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIR 705 HSP 2 Score: 84.3445 bits (207), Expect = 7.092e-16 Identity = 50/132 (37.88%), Postives = 76/132 (57.58%), Query Frame = -2 Query: 331 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 726 IDAI KR + G+ E +R + +LL +DG + + VIAATNR + +D AL R GR DR+I++ P R IL+IH++ M + DV+ E++A F GA L ++C EA + +R ++ ED Sbjct: 311 IDAIAPKR--EKAHGEVE-KRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLED 439
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH7_ORYSJ (Cell division protease ftsH homolog 7, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH7 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.158e-16 Identity = 52/136 (38.24%), Postives = 78/136 (57.35%), Query Frame = -2 Query: 328 IDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIH-SRK-MTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 726 IDA+ R + + E ++T+ +LL ++DGF ++ + V+ ATNRAD+LDPAL R GR DR + + P R IL++H SRK + + DV+ ++A T F GA L + EA +LA R + V DF Sbjct: 447 IDAVAKSRDGRYRIVSNDEREQTLNQLLTEMDGFDTNSAVIVLGATNRADVLDPALRRPGRFDRVVMVEAPDRFGRESILKVHVSRKELPLGKDVDLSDIAAMTTGFTGADLANLVNEAALLAGRSNKEIVEKIDF 582
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: CDC48_EMENI (Cell division control protein 48 OS=Emericella nidulans GN=cdc48 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.158e-16 Identity = 46/122 (37.70%), Postives = 73/122 (59.84%), Query Frame = -2 Query: 361 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 726 ID+I KR + +G+ E +R + +LL +DG + + V+AATNR + +DPAL R GR DR++++ P R IL IH++ M + DV+ E +A T + G+ L ++C EA M +R Sbjct: 331 IDSIAPKR--EKTNGEVE-RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIR 449 HSP 2 Score: 76.6406 bits (187), Expect = 1.479e-13 Identity = 46/122 (37.70%), Postives = 66/122 (54.10%), Query Frame = -2 Query: 361 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 726 +D+I R S R + +LL ++DG +S + VI ATNR + LD AL+R GRLD + +P P + +R IL+ RK V DV+ E +A T F+GA L V A LA++ Sbjct: 605 LDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQASREGILKAQLRKTPVASDVDIEFIASKTHGFSGADLGFVTQRAVKLAIK 726 The following BLAST results are available for this feature:
BLAST of CN189408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 293
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189408 ID=CN189408; Name=CN189408; organism=Citrus sinensis; type=EST; length=727bpback to top |