CN189408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: SPA5L_BOVIN (Spermatogenesis-associated protein 5-like protein 1 OS=Bos taurus GN=SPATA5L1 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.430e-16 Identity = 55/148 (37.16%), Postives = 86/148 (58.11%), Query Frame = -2 Query: 304 IDAIGTKRFDSEVS-GDREVQRTMLELLNQLDG---FSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR---DATEVNHEDFNEGIIQVQ 726 +D +G K + S D+ + LE +L+ F+S+ + V+AATNR D+LD AL+R GRLD+ I +P P E+ R IL++ ++ + PDV+ E++A T F+GA L +C EA +LAL+ + T V E F E + V+ Sbjct: 596 LDGVGLKTIERRGSKSDQHGKCKQLEKNEELEFQEIFNSN--VIVVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNTPMGPDVSLEKVAAETCFFSGADLGNLCKEAALLALQENGLEVTTVKQEHFLESLKTVK 741 HSP 2 Score: 82.4185 bits (202), Expect = 2.695e-15 Identity = 47/126 (37.30%), Postives = 68/126 (53.97%), Query Frame = -2 Query: 304 RTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLAL-----RRDATEVNHEDFNEGIIQVQ 666 R + ++L LDG D + V+ +TNR D LDPAL R GR DR++ + P+ R ILQ+ + KM + V+ LA T + GA L A+C EA M AL +D ++ DF E ++Q Sbjct: 322 RVVAQVLTLLDGIGEDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLRQRKAILQVITSKMPISGQVDLNLLAEMTVGYVGADLTALCREAAMQALLHSEKNQDNPTIDETDFLEAFKKIQ 447
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSHB_ARATH (Cell division protease ftsH homolog 11, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=FTSH11 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.092e-16 Identity = 50/131 (38.17%), Postives = 75/131 (57.25%), Query Frame = -2 Query: 334 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHE 726 IDA+G+ R E ++T+ +LL ++DGF ++ I V+AATN DILDPAL R GR DR I +P P R IL+++ + + DV+ + +AR T FNGA L + A + A A +++ E Sbjct: 463 IDAVGSTRKQWE----GHTKKTLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPDVRGREEILELYLQGKPMSEDVDVKAIARGTPGFNGADLANLVNIAAIKAAVEGAEKLSSE 589
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: ATAD2_HUMAN (ATPase family AAA domain-containing protein 2 OS=Homo sapiens GN=ATAD2 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.092e-16 Identity = 47/99 (47.47%), Postives = 59/99 (59.60%), Query Frame = -2 Query: 358 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHP-DVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 651 LL +DG S I VI ATNR D +DPAL R GR DR+ P +EAR IL+IH+R P D EELA + + GA +K++C EA + ALRR Sbjct: 555 LLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCVGYCGADIKSICAEAALCALRR 653
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: NVL_DICDI (Putative ribosome biogenesis ATPase nvl OS=Dictyostelium discoideum GN=nvl PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.580e-15 Identity = 50/141 (35.46%), Postives = 78/141 (55.32%), Query Frame = -2 Query: 328 DAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARS--TDDFNGAQLKAVCVEAGMLALRR----DATE---VNHEDF 723 DA+ KR + G++ +R + +LL ++DG + +IAATNR DI+D A+ R GRLD+ + +P PS E R IL+ + K+ +H DV+ ++ F+GA L + EA A+ R ++TE V EDF Sbjct: 669 DALAPKRGGGDGGGNQATERVVNQLLTEMDGLEKRSEVFIIAATNRPDIIDAAMCRPGRLDKMVYVPLPSPEERCEILKTLTHKIPIHQDVDLIKVGTDLRCHSFSGADLSLLVKEAANHAISRGFDNNSTEPDTVTMEDF 809
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PEX1_MOUSE (Peroxisome biogenesis factor 1 OS=Mus musculus GN=Pex1 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.064e-15 Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = -2 Query: 361 RTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 666 R + +LL QLDG + V+AAT+R D++DPAL+R GRLD+ + P P + +R IL + S+ + + DV+ + +A TD F GA LKA+ A + AL+ Sbjct: 960 RVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILTVLSKSLALADDVDLQHVASVTDSFTGADLKALLYNAQLEALQ 1061
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: NSF_ARATH (Vesicle-fusing ATPase OS=Arabidopsis thaliana GN=NSF PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.064e-15 Identity = 50/140 (35.71%), Postives = 77/140 (55.00%), Query Frame = -2 Query: 286 ELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMT----VHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDAT-------------EVNHEDFNEGIIQVQAKKKAS 654 +LL ++DG + + + +I TNR D+LD AL+R GRL+ ++E+ P E R +ILQIH+ KM + D+N +ELA T +++GA+L+ V A AL R + ++ EDF I +VQ AS Sbjct: 350 QLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMKENSFLGTDINLQELAARTKNYSGAELEGVVKSATSYALNRQLSMDDLTKPVEEENIKITMEDFLHAIYEVQPAFGAS 489
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: SEC18_CANAL (Vesicular-fusion protein SEC18 OS=Candida albicans GN=SEC18 PE=3 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.520e-15 Identity = 44/127 (34.65%), Postives = 74/127 (58.27%), Query Frame = -2 Query: 358 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMT----VHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 726 +D++ +R + G + +LL+++DG + I VI TNR D++D AL+R GR + +IE+ P E+ R I IH++K+T + DVNF+EL+ T +F GA+++ +C A A+ R Sbjct: 387 LDSVFKQRGSGKSDGTGVGDNVVNQLLSKMDGVDQLNNILVIGMTNRLDLIDTALLRPGRFEIQIEISLPDEKGRKDIFLIHTKKLTENGILSSDVNFDELSTLTKNFTGAEIEGLCNSAKSYAISR 513
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH5_ORYSJ (Cell division protease ftsH homolog 5, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH5 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.520e-15 Identity = 52/132 (39.39%), Postives = 73/132 (55.30%), Query Frame = -2 Query: 331 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 726 IDAIG R + + ++ T+ +LL +LDGF ++ I VIAATN + LD AL+R GR DR I +P+P E R +IL+ H K+ DV+ +AR T F+GA L + A + A A V D Sbjct: 331 IDAIGGSRNPKD---QQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMSKVLKSDDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGAKAVTMND 459
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: ATAD2_MOUSE (ATPase family AAA domain-containing protein 2 OS=Mus musculus GN=Atad2 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.520e-15 Identity = 46/99 (46.46%), Postives = 58/99 (58.59%), Query Frame = -2 Query: 358 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHP-DVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 651 LL +DG S I VI ATNR D +DPAL R GR DR+ P + AR IL+IH+R P D+ EELA + GA +K++C EA + ALRR Sbjct: 210 LLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKNARKEILKIHTRDWNPKPVDMFLEELAEHCVGYCGADIKSICAEAALCALRR 308
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: YHI5_SCHPO (Uncharacterized AAA domain-containing protein P22H7.05c OS=Schizosaccharomyces pombe GN=SPBP22H7.05c PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.597e-15 Identity = 48/129 (37.21%), Postives = 72/129 (55.81%), Query Frame = -2 Query: 343 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVH-PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEV 726 ID + R + + T+L L+ DG + ++ VI ATNR + LDPAL R GR DR+ P P+++AR +IL+I+S + P+ LA ST + GA LKA+C EA + A+RR ++ Sbjct: 479 IDGLAPIRSSKQEQTHSSIVSTLLALM---DGLDTRGQVVVIGATNRPNDLDPALRRPGRFDREFYFPLPNKQARMKILEINSLHFSPKIPESYLLHLAESTSGYGGADLKALCTEAALNAVRRTFPQI 604 The following BLAST results are available for this feature:
BLAST of CN189408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 293
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189408 ID=CN189408; Name=CN189408; organism=Citrus sinensis; type=EST; length=727bpback to top |