CN189408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: TBP7_YEAST (TAT-binding homolog 7 OS=Saccharomyces cerevisiae GN=YTA7 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.597e-15 Identity = 46/129 (35.66%), Postives = 73/129 (56.59%), Query Frame = -2 Query: 343 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNF-EELARSTDDFNGAQLKAVCVEAGMLALRRDATEV 726 ID + R + + T+L L+ DG + ++ VI ATNR D +DPAL R GR DR+ P P +AR +ILQI +RK + NF ++LA T + GA L+++C EA +++++R ++ Sbjct: 520 IDGLAPVRSSKQEQIHASIVSTLLALM---DGMDNRGQVIVIGATNRPDAVDPALRRPGRFDREFYFPLPDVKARFKILQIQTRKWSSPLSTNFIDKLAFLTKGYGGADLRSLCTEAALISIQRSFPQI 645
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH4_ARATH (Cell division protease ftsH homolog 4, mitochondrial OS=Arabidopsis thaliana GN=FTSH4 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.597e-15 Identity = 52/150 (34.67%), Postives = 85/150 (56.67%), Query Frame = -2 Query: 283 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED--FNEGIIQVQAKKKASL 726 IDAIG R + + ++ T+ ++L +LDGF ++ I V+AATN + LD AL+R GR DR I +P+P E R +IL+ H K+ DV+ +AR T F+GA L + A + A + +V D F + I + +++K+++ Sbjct: 328 IDAIGGSRNPKD---QQYMKMTLNQMLVELDGFKQNEGIIVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMSKVLKAEDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGSKDVTMSDLEFAKDRIMMGSERKSAV 474
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: NSF_PONAB (Vesicle-fusing ATPase OS=Pongo abelii GN=NSF PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.004e-15 Identity = 50/128 (39.06%), Postives = 78/128 (60.94%), Query Frame = -2 Query: 358 IDAIGTKRFDSEVSGDREVQRTML-ELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVH----PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 726 IDAI +R ++G V T++ +LL+++DG + I VI TNR D++D AL+R GRL+ K+E+ P E+ R +IL IH+ +M H DV+ +ELA T +F+GA+L+ + A A+ R Sbjct: 330 IDAICKQR--GSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAMETKNFSGAELEGLVRAAQSTAMNR 455
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: CD48C_ARATH (Cell division control protein 48 homolog C OS=Arabidopsis thaliana GN=CDC48C PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 6.004e-15 Identity = 56/147 (38.10%), Postives = 81/147 (55.10%), Query Frame = -2 Query: 319 IDAIGTKRFDSEVSGDREVQ-RTMLELLNQLDG----------FSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEG 726 IDAIG+KR + + RE++ R + +LL +DG SS + VI ATNR D LDPAL RSGR + +I L P E+ARA IL + ++K+ + + + +AR T F GA L++V AG A++R E +G Sbjct: 335 IDAIGSKRENQQ----REMEKRIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIKRILDSRKSEQSGDG 477
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PEX1_HUMAN (Peroxisome biogenesis factor 1 OS=Homo sapiens GN=PEX1 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.841e-15 Identity = 42/101 (41.58%), Postives = 62/101 (61.39%), Query Frame = -2 Query: 364 RTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLAL 666 R + +LL QLDG + V+AAT+R D++DPAL+R GRLD+ + P P + +R IL + S + + DV+ + +A TD F GA LKA+ A + AL Sbjct: 959 RVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNAQLEAL 1059
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH4_ORYSJ (Cell division protease ftsH homolog 4, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH4 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.841e-15 Identity = 52/132 (39.39%), Postives = 72/132 (54.55%), Query Frame = -2 Query: 331 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 726 IDAIG R + + ++ T+ +LL +LDGF ++ I VIAATN LD AL+R GR DR I +P+P E R +IL+ H K+ DV+ +AR T F+GA L + A + A A V D Sbjct: 324 IDAIGGSRNPKD---QQYMRMTLNQLLVELDGFKQNEGIIVIAATNFPQSLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMLKVLKSDDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGAKAVTMND 452
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: NSF_RAT (Vesicle-fusing ATPase OS=Rattus norvegicus GN=Nsf PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.024e-14 Identity = 50/128 (39.06%), Postives = 78/128 (60.94%), Query Frame = -2 Query: 358 IDAIGTKRFDSEVSGDREVQRTML-ELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVH----PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 726 IDAI +R ++G V T++ +LL+++DG + I VI TNR D++D AL+R GRL+ K+E+ P E+ R +IL IH+ +M H DV+ +ELA T +F+GA+L+ + A A+ R Sbjct: 330 IDAICKQR--GSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNR 455
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: NSF_MOUSE (Vesicle-fusing ATPase OS=Mus musculus GN=Nsf PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.024e-14 Identity = 50/128 (39.06%), Postives = 78/128 (60.94%), Query Frame = -2 Query: 358 IDAIGTKRFDSEVSGDREVQRTML-ELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVH----PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 726 IDAI +R ++G V T++ +LL+++DG + I VI TNR D++D AL+R GRL+ K+E+ P E+ R +IL IH+ +M H DV+ +ELA T +F+GA+L+ + A A+ R Sbjct: 330 IDAICKQR--GSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNR 455
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: NSF_HUMAN (Vesicle-fusing ATPase OS=Homo sapiens GN=NSF PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 1.024e-14 Identity = 50/128 (39.06%), Postives = 78/128 (60.94%), Query Frame = -2 Query: 358 IDAIGTKRFDSEVSGDREVQRTML-ELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVH----PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 726 IDAI +R ++G V T++ +LL+++DG + I VI TNR D++D AL+R GRL+ K+E+ P E+ R +IL IH+ +M H DV+ +ELA T +F+GA+L+ + A A+ R Sbjct: 330 IDAICKQR--GSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNR 455
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: NSF_CRIGR (Vesicle-fusing ATPase OS=Cricetulus griseus GN=NSF PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.024e-14 Identity = 50/128 (39.06%), Postives = 78/128 (60.94%), Query Frame = -2 Query: 358 IDAIGTKRFDSEVSGDREVQRTML-ELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVH----PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 726 IDAI +R ++G V T++ +LL+++DG + I VI TNR D++D AL+R GRL+ K+E+ P E+ R +IL IH+ +M H DV+ +ELA T +F+GA+L+ + A A+ R Sbjct: 330 IDAICKQR--GSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNR 455 The following BLAST results are available for this feature:
BLAST of CN189408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 293
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189408 ID=CN189408; Name=CN189408; organism=Citrus sinensis; type=EST; length=727bpback to top |