CN189408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: SEC18_SCHPO (Vesicular-fusion protein sec18 OS=Schizosaccharomyces pombe GN=sec18 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13 Identity = 54/160 (33.75%), Postives = 83/160 (51.88%), Query Frame = -2 Query: 304 IDAIGTKRFDSEVSGDREV-QRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMT----VHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR--------------DATEVNHEDFNEGIIQVQ 726 +DAI KR S GD V + + +LL ++DG + I VI TNR D++D AL+R GRL+ +E+ P E R +IL+IH+ +M + DV+ EELA T +F+GA++ + A A R + +VN DF + +V+ Sbjct: 381 LDAICKKRGSS--GGDTGVGDQVVNQLLAKMDGVDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILENDVDMEELASLTKNFSGAEIAGLIKSASSFAFYRHIKVGTTAAVSGNLENIKVNRNDFLNALSEVR 538
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: SPA5L_XENTR (Spermatogenesis-associated protein 5-like protein 1 OS=Xenopus tropicalis GN=spata5l1 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13 Identity = 44/121 (36.36%), Postives = 69/121 (57.02%), Query Frame = -2 Query: 364 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLAL 726 +DA+ KR S + + R + +LL +DG SD+++ +AAT+R D +DPAL R GR DR++ + P+ + R IL++ M DV+ LA T + GA L A+C +A M A+ Sbjct: 296 VDALCPKRGHSNSAPEN---RVVAQLLTLMDGIDSDNKMVTVAATSRPDAIDPALRRPGRFDREVIIGTPTHKQRQAILEMMISNMPTDRDVDAAALADVTVGYVGADLTALCRDAAMQAV 413
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PEX6_ASHGO (Peroxisomal biogenesis factor 6 OS=Ashbya gossypii GN=PEX6 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13 Identity = 51/134 (38.06%), Postives = 80/134 (59.70%), Query Frame = -2 Query: 334 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSD-DRIKVIAATNRADILDPALMRSGRLDRKIELP-HPSEEARARILQIHSRKMTVHPDVNFEELARSTD-DFNGAQLKAVCVEAGMLALRRDATEVNHE 726 +D++ KR + SG + R + +LL +LDG S+ D + VI ATNR D+LD AL+R GR D+ + L + E +A IL+ +RK T+ PDV+ ++LA S + GA A+C +A + A+ R A V+ + Sbjct: 824 LDSVAPKRGNQGDSGG-VMDRIVSQLLAELDGLSTGGDGLFVIGATNRPDLLDEALLRPGRFDKLLYLGISDTNEKQANILRALTRKFTLDPDVSLDDLAASCPFTYTGADFYALCSDAMLNAMTRIAGNVDEK 956
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: YME1_SCHMA (Protein YME1 homolog OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.523e-13 Identity = 44/128 (34.38%), Postives = 79/128 (61.72%), Query Frame = -2 Query: 292 RTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGM-LALRRDA-TEVNH-EDFNEGIIQVQAKKK 666 +T+ +LL ++DGF S + I V+ ATN+A++LD AL+R GR D +I + P+ E R +L ++ +K+ +++ E+LA T + GA ++ + +A + ALR D E++H D + +I AK++ Sbjct: 285 QTINQLLAEMDGFQSKEGIIVLGATNQAEVLDKALLRPGRFDVQIHVSPPTYEGRIALLNLYLKKVKTGSNIDIEKLAHGTVGYTGADIQNLVNQAAIAAALRNDPFVEMHHLWDARDRLIMGPAKRR 412
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PEX6_GLOLA (Peroxisomal biogenesis factor 6 OS=Glomerella lagenarium GN=PEX6 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.523e-13 Identity = 48/135 (35.56%), Postives = 77/135 (57.04%), Query Frame = -2 Query: 340 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDR----IKVIAATNRADILDPALMRSGRLDRKIEL-PHPSEEARARILQIHSRKMTVHPDVNFEELARSTD-DFNGAQLKAVCVEAGMLALRRDATEVN 726 +D++ KR + SG + R + +LL +LDG S D + VI ATNR D+LDPAL+R GR D+ + L + + + +IL+ +RK T+HP V+ +A+ + GA A+C +A + A+ R A V+ Sbjct: 1095 LDSVAPKRGNQGDSGG-VMDRIVSQLLAELDGMSGGDDTSGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQLKILEALTRKFTLHPSVSLHSVAQQLPFTYTGADFYALCSDAMLKAVTRQAASVD 1228
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PEX6_SCHPO (Peroxisomal ATPase pex6 OS=Schizosaccharomyces pombe GN=pex6 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.295e-13 Identity = 45/133 (33.83%), Postives = 82/133 (61.65%), Query Frame = -2 Query: 340 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDR--IKVIAATNRADILDPALMRSGRLDRKIELP-HPSEEARARILQIHSRKMTVHPDVNFEELARST-DDFNGAQLKAVCVEAGMLALRRDATEVN 726 +D+I R +S SG+ + R + +LL +LD S D+ + VI ATNR D+LDP+L+R GR D+ + L + SEE++A +L+ ++ + ++ E+A++ +F GA + A+C +A + A++R E++ Sbjct: 756 LDSIAPHRGNSSDSGN-VMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAKNCHPNFTGADMYALCSDAVLSAIKRKTNEID 887
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PEX6_PENCH (Peroxisomal biogenesis factor 6 OS=Penicillium chrysogenum GN=pex6 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.303e-13 Identity = 48/137 (35.04%), Postives = 78/137 (56.93%), Query Frame = -2 Query: 334 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDR----IKVIAATNRADILDPALMRSGRLDRKIEL-PHPSEEARARILQIHSRKMTVHPDVNFEELARSTD-DFNGAQLKAVCVEAGMLALRRDATEVNHE 726 +D++ KR + SG + R + +LL +LDG + + + VI ATNR D+LD AL+R GR D+ + L + +A IL+ +RK +HPDV+ + +A + GA L A+C +A + A+ R AT V+ + Sbjct: 1131 LDSVAPKRGNQGDSGG-VMDRIVSQLLAELDGMNGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHRKQATILEALTRKFALHPDVSLDRVAEQLPLTYTGADLYALCSDAMLKAITRKATAVDEK 1266
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: SPG7_RAT (Paraplegin OS=Rattus norvegicus GN=Spg7 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.620e-13 Identity = 46/115 (40.00%), Postives = 70/115 (60.87%), Query Frame = -2 Query: 394 IDAIGTKRFDSEVSG--DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSR--KMTVHPDVNFEELARSTDDFNGAQLKA 726 IDA+G KR S +SG + E ++T+ +LL ++DG + D + V+A+TNRAD+LD ALMR GRLDR + + P+ + R I + H + K+T + LA T F+G K+ Sbjct: 410 IDAVGKKRSTS-MSGFSNTEEEQTLNQLLVEMDGMGTADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGTAKKS 523
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: NSF_DICDI (Vesicle-fusing ATPase OS=Dictyostelium discoideum GN=nsfA PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.620e-13 Identity = 50/137 (36.50%), Postives = 74/137 (54.01%), Query Frame = -2 Query: 340 IDAI----GTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKM----TVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVN 726 +DAI G+++ DS V GD V +LL +DG S + I VI TNR D++D AL+R GRL+ +E+ P E R +I +IH+ KM + DVN A +T +++GA+++ V A A R N Sbjct: 334 LDAICKSRGSRQGDSGV-GDSVVN----QLLAMIDGVESLNNILVIGMTNRKDMIDEALLRPGRLEVHVEISLPDEHGREQIFKIHTAKMRDQNALDKDVNLANYAHTTRNYSGAEIEGVVKSAASYAFSRQVDTKN 465
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PEX6_PICPA (Peroxisomal biogenesis factor 6 OS=Pichia pastoris GN=PEX6 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.339e-13 Identity = 49/138 (35.51%), Postives = 80/138 (57.97%), Query Frame = -2 Query: 334 IDAIGTKRFDSEVSGDRE--VQRTMLELLNQLDGFSSDDR---IKVIAATNRADILDPALMRSGRLDRKIEL-PHPSEEARARILQIHSRKMTVHPDVNFEELARSTD-DFNGAQLKAVCVEAGMLALRRDATEVNHE 726 +D++ KR + GD E + R + +LL +LDG S D + V+ ATNR D+LD AL+R GR D+ + L + E +++I++ SRK +HP V+ +++A S F GA A+C +A + A+ R A V+ + Sbjct: 920 LDSVAPKRGNQ---GDSEGVMDRIVSQLLAELDGMSGGDGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGVSDTHEKQSKIMEALSRKFHLHPSVDLDKVAESCPFTFTGADFYALCSDAMLNAMTRIANTVDEK 1054 The following BLAST results are available for this feature:
BLAST of CN189408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 293
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189408 ID=CN189408; Name=CN189408; organism=Citrus sinensis; type=EST; length=727bpback to top |