CN189408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: SEC18_YEAST (Vesicular-fusion protein SEC18 OS=Saccharomyces cerevisiae GN=SEC18 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.789e-12 Identity = 46/135 (34.07%), Postives = 73/135 (54.07%), Query Frame = -2 Query: 331 RFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKM----TVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR------RDATEVNHED 705 R D GD V +LL ++DG + I VI TNR D++D AL+R GR + ++E+ P E+ R +I I ++KM + DVN ELA T +F+GA+++ + A A+ + AT++N +D Sbjct: 361 RGDGTGVGDNVVN----QLLAKMDGVDQLNNILVIGMTNRKDLIDSALLRPGRFEVQVEIHLPDEKGRLQIFDIQTKKMRENNMMSDDVNLAELAALTKNFSGAEIEGLVKSASSFAINKTVNIGKGATKLNTKD 491
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: KATL1_OTOGA (Katanin p60 ATPase-containing subunit A-like 1 OS=Otolemur garnettii GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.789e-12 Identity = 47/139 (33.81%), Postives = 82/139 (58.99%), Query Frame = -2 Query: 331 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDG----FSSDDRIK---VIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 726 ID+I ++R S+ +R ELL Q+DG +DD K V+AATN +D AL R RL+++I +P P+ + RA +L+I+ R++ + PD+ E++A + ++GA + VC +A ++A+RR ++ E+ Sbjct: 309 IDSICSRRGTSDEH--EASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLSPEE 443
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: KATL1_HUMAN (Katanin p60 ATPase-containing subunit A-like 1 OS=Homo sapiens GN=KATNAL1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.789e-12 Identity = 47/139 (33.81%), Postives = 82/139 (58.99%), Query Frame = -2 Query: 331 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDG----FSSDDRIK---VIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 726 ID+I ++R S+ +R ELL Q+DG +DD K V+AATN +D AL R RL+++I +P P+ + RA +L+I+ R++ + PD+ E++A + ++GA + VC +A ++A+RR ++ E+ Sbjct: 309 IDSICSRRGTSDEH--EASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLSPEE 443
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: KATL1_PAPAN (Katanin p60 ATPase-containing subunit A-like 1 OS=Papio anubis GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.643e-12 Identity = 47/139 (33.81%), Postives = 81/139 (58.27%), Query Frame = -2 Query: 331 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDG----FSSDDRIK---VIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 726 ID+I ++R S+ +R ELL Q+DG +DD K V+AATN +D AL R RL+++I +P P+ + RA +L+I+ R++ + PD+ E++A + ++GA + VC +A ++A+RR + E+ Sbjct: 309 IDSICSRRGTSDEH--EASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLGPEE 443
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PEX6_YEAST (Peroxisomal ATPase PEX6 OS=Saccharomyces cerevisiae GN=PEX6 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.757e-12 Identity = 50/131 (38.17%), Postives = 75/131 (57.25%), Query Frame = -2 Query: 343 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSD-DRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEAR-ARILQIHSRKMTVHPDVNFEELARSTD-DFNGAQLKAVCVEAGMLALRRDATEV 726 ID++ KR + SG + R + +LL +LDG S+D D + VI ATNR D+LD AL+R GR D+ + L P + + IL+ +RK + DV ELA+ ++ GA A+C +A + A+ R A V Sbjct: 833 IDSVAPKRGNQGDSGG-VMDRIVSQLLAELDGMSTDADGVFVIGATNRPDLLDEALLRPGRFDKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLIELAKLCPFNYTGADFYALCSDAMLNAMSRIARMV 962
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: KATL1_RABIT (Katanin p60 ATPase-containing subunit A-like 1 OS=Oryctolagus cuniculus GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.757e-12 Identity = 47/139 (33.81%), Postives = 81/139 (58.27%), Query Frame = -2 Query: 331 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDG----FSSDDRIK---VIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 726 ID+I ++R S+ +R ELL Q+DG +DD K V+AATN +D AL R RL+++I +P P+ + RA +L+I R++ + PD+ E++A + ++GA + VC +A ++A+RR ++ E+ Sbjct: 309 IDSICSRRGTSDEH--EASRRVKSELLVQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKISLREVELDPDIRLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLSPEE 443
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: TBP7_CAEBR (TAT-binding homolog 7 OS=Caenorhabditis briggsae GN=lex-1 PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 8.115e-12 Identity = 44/124 (35.48%), Postives = 62/124 (50.00%), Query Frame = -2 Query: 361 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDV--NFEELARSTDDFNGAQLKAVCVEAGMLALR 726 ID + R + + T+L L++ LDG + VI ATNR D LDPAL R GR DR++ P AR IL IH+ K + + +A T + GA LK +C E+ ++ LR Sbjct: 512 IDGLAPVRSSKQDQIHASIVSTLLALMDGLDGRGE---VVVIGATNRLDSLDPALRRPGRFDRELRFSLPDLNARRHILDIHTSKWEENKPTPETLDGIAEKTSGYCGADLKFLCTESVLIGLR 632
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS2_METJA (Putative 26S protease regulatory subunit homolog MJ1494 OS=Methanocaldococcus jannaschii GN=MJ1494 PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 8.115e-12 Identity = 42/146 (28.77%), Postives = 76/146 (52.05%), Query Frame = -2 Query: 292 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGM-LALRRDATEVNHEDFNEGIIQVQAKKK 726 +DAIG R + GD V + LL +LDG ++ + IAATN +LDPA+ R + +IE P++E R +I++++++KM + N +E T F+G +K ++ + A+ D V+ ED + ++ ++ Sbjct: 222 LDAIGLSREYQSLRGD--VSEVVNALLTELDGIKENEGVVTIAATNNPAMLDPAIR--SRFEEEIEFKLPNDEERLKIMELYAKKMPLPVKANLKEFVEKTKGFSGRDIKEKFLKPALHRAILEDRDYVSKEDLEWALKKILGNRR 363
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PEX6_DEBHA (Peroxisomal biogenesis factor 6 OS=Debaryomyces hansenii GN=PEX6 PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.060e-11 Identity = 52/160 (32.50%), Postives = 90/160 (56.25%), Query Frame = -2 Query: 274 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSD-----DRIKVIAATNRADILDPALMRSGRLDRKIELP-HPSEEARARILQIHSRKMTVHPDVNFEELA-RSTDDFNGAQLKAVCVEAGMLALRRDATEVNH--EDFNEGIIQVQAKKKASLNYY 726 +D++ KR + SG + R + +LL +LDG S D + V+ ATNR D+LD AL+R GR D+ + L ++E +++IL+ +RK + +V+ E+A R + F GA A+C ++ + A+ R A EV+ + NE + Q K++ S ++ Sbjct: 940 LDSVAPKRGNQGDSGG-VMDRIVSQLLAELDGMSGGAEGGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTDEKQSKILEALTRKFKLADNVDLYEIAKRCSFTFTGADFYALCSDSMLNAMTRTANEVDAKIKKLNEELTS-QGKEEISTRWW 1097
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PEX1_SCHPO (Peroxisomal ATPase pex1 OS=Schizosaccharomyces pombe GN=pex1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.060e-11 Identity = 35/103 (33.98%), Postives = 62/103 (60.19%), Query Frame = -2 Query: 358 RTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 666 R + ++L Q+DG S D + ++AAT R D++DPAL+R GRLD+ I P+EE R +LQ + + + ++L+ TD + A L ++ +A ++A+ + Sbjct: 725 RVVNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVLQKLANRFHIENAAMLKKLSTLTDGYTYADLSSLLYDAHLIAVHK 827 The following BLAST results are available for this feature:
BLAST of CN189408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 293
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189408 ID=CN189408; Name=CN189408; organism=Citrus sinensis; type=EST; length=727bpback to top |