CN189408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PEX1_DICDI (Peroxisome biogenesis factor 1 OS=Dictyostelium discoideum GN=pex1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.060e-11 Identity = 37/111 (33.33%), Postives = 60/111 (54.05%), Query Frame = -2 Query: 334 RTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHE 666 R + + L QLDG + V+AAT+R D++DPAL+R GRLD+ + P R IL KM + P ++ E+L+ +T + GA L+A+ A + ++ + E Sbjct: 985 RVVNQFLTQLDGVEGLTGVYVLAATSRPDLIDPALLRPGRLDKSLYCNIPEFNERLDILTCLKSKMNLSPSISLEQLSTNTQYYTGADLRALMYNAQLKSIHEWMNHLEEE 1095
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: KATL1_SORAR (Katanin p60 ATPase-containing subunit A-like 1 OS=Sorex araneus GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.384e-11 Identity = 46/139 (33.09%), Postives = 81/139 (58.27%), Query Frame = -2 Query: 331 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDG----FSSDDRIK---VIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 726 ID+I ++R S+ +R ELL Q+DG +DD K V+AATN +D AL R RL+++I +P P+ + R +L+I+ R++ + PD+ E++A + ++GA + VC +A ++A+RR ++ E+ Sbjct: 309 IDSICSRRGTSDEH--EASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRTDLLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLSPEE 443
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: KTNA1_MOUSE (Katanin p60 ATPase-containing subunit A1 OS=Mus musculus GN=Katna1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.808e-11 Identity = 49/131 (37.40%), Postives = 77/131 (58.78%), Query Frame = -2 Query: 358 IDAIGTKRFDSEVSGDREVQRTM-LELLNQLDGFS----SDDRIK---VIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 726 ID+I ++R SE + E R M ELL Q+DG +DD K V+AATN +D AL R RL+++I +P PS + R +L+I R++ + DVN +A + + ++GA + VC +A ++A+RR Sbjct: 310 IDSICSRRGTSE---EHEASRRMKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIAENMEGYSGADITNVCRDASLMAMRR 435
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: KTNA1_XENTR (Katanin p60 ATPase-containing subunit A1 OS=Xenopus tropicalis GN=katna1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.084e-11 Identity = 45/130 (34.62%), Postives = 74/130 (56.92%), Query Frame = -2 Query: 358 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDR-------IKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 726 ID+I ++R SE +R ELL Q+DG + V+AATN +D AL R RL+++I +P PS + R +L+I+ +++ + DVN E +A + D ++GA + VC +A ++A+RR Sbjct: 311 IDSICSRRGTSEEH--EASRRVKAELLVQMDGVGGASENEDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRINLKELELADDVNIECIAENMDGYSGADITNVCRDASLMAMRR 436
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: KTNA1_XENLA (Katanin p60 ATPase-containing subunit (Fragment) OS=Xenopus laevis GN=katna1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.084e-11 Identity = 45/130 (34.62%), Postives = 74/130 (56.92%), Query Frame = -2 Query: 358 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDR-------IKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 726 ID+I ++R SE +R ELL Q+DG + V+AATN +D AL R RL+++I +P PS + R +L+I+ +++ + DVN E +A + D ++GA + VC +A ++A+RR Sbjct: 307 IDSICSRRGTSEEH--EASRRVKAELLVQMDGVGGASENEDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRINLKELELADDVNIECIAENMDGYSGADITNVCRDASLMAMRR 432
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: FTSH_OLTVI (Cell division protease ftsH homolog OS=Oltmannsiellopsis viridis GN=ftsH PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.084e-11 Identity = 37/117 (31.62%), Postives = 68/117 (58.12%), Query Frame = -2 Query: 355 EVSGDREVQRTMLE----LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 693 E S + EV++ L LL ++DG + + + V ATNR ++LDPAL+R GR D+ + + P ++ R IL+++++K+ +++E A T + A L A+ ++ +LA+ D Sbjct: 1489 ESSNEMEVEKNQLSALIRLLVEMDGLNPLNGVIVFGATNRPEVLDPALIRPGRFDQILPIELPGKQKRVEILKLYAKKLGTAKSISWEYFANRTVGLSAADLAAIMNQSTILAVFND 1605
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: KTNA1_DANRE (Katanin p60 ATPase-containing subunit A1 OS=Danio rerio GN=katna1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.027e-11 Identity = 43/127 (33.86%), Postives = 77/127 (60.63%), Query Frame = -2 Query: 358 IDAIGTKRFDSEV-SGDREVQRTMLELLNQLDGFSSDDRIK---VIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 726 ID+I ++R SE R V+ +L ++ + G S +D K V+AATN +D AL R RL+++I +P PS + R +L+I+ +++ + DVN +++A + ++GA + VC +A ++A+RR Sbjct: 305 IDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGRVDLLKINLKELDLANDVNMDKIAEQMEGYSGADITNVCRDASLMAMRR 429
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: YR476_MIMIV (Putative AAA family ATPase R476 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R476 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.260e-11 Identity = 41/127 (32.28%), Postives = 72/127 (56.69%), Query Frame = -2 Query: 358 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKM----TVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 726 IDA+ R S+ + R+ + + L ++DG + + I TNR ++LDPA +RSGR I++ P +E R +I QIH++K+ + DV+ +LA T++F+GA ++ + A + +L R Sbjct: 682 IDAMLPSRSGSDGNPVRD--SVVNQFLAEMDGLEVFNNLICIGITNRLELLDPATIRSGRFGIHIKIDLPDQEGRVKIFQIHTKKLQELNRLSDDVDISKLAVITEEFSGADIEGMVELASVYSLER 806
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: KTNA1_RAT (Katanin p60 ATPase-containing subunit A1 OS=Rattus norvegicus GN=Katna1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.260e-11 Identity = 47/130 (36.15%), Postives = 75/130 (57.69%), Query Frame = -2 Query: 358 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFS----SDDRIK---VIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 726 ID+I ++R SE +R ELL Q+DG +DD K V+AATN +D AL R RL+++I +P PS + R +L+I R++ + DVN +A + + ++GA + VC +A ++A+RR Sbjct: 310 IDSICSRRGTSEEH--EASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIAENMEGYSGADITNVCRDASLMAMRR 435
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PEX6_PICAN (Peroxisomal biogenesis factor 6 OS=Pichia angusta GN=PEX6 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 46/133 (34.59%), Postives = 74/133 (55.64%), Query Frame = -2 Query: 343 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS---DDRIKVIAATNRADILDPALMRSGRLDRKIELP-HPSEEARARILQIHSRKMTVHPDVNFEELARSTD-DFNGAQLKAVCVEAGMLALRRDATEV 726 +D++ KR + SG + R + +LL +LDG S D + V+ ATNR D+LD AL+R GR D+ + L + E +A+I+Q +RK + P V+ +A + + GA A+C +A + A+ R A V Sbjct: 914 LDSVAPKRGNQGDSGG-VMDRIVSQLLAELDGMSGAEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIADTHEKQAKIIQALTRKFQLDPSVDLGRIAETCPFTYTGADFYALCSDAMLNAMTRTAGAV 1045 The following BLAST results are available for this feature:
BLAST of CN189408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 293
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189408 ID=CN189408; Name=CN189408; organism=Citrus sinensis; type=EST; length=727bpback to top |