CN189408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.273e-37 Identity = 83/144 (57.64%), Postives = 99/144 (68.75%), Query Frame = -2 Query: 298 IDAIGTKRFDSEV-SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 726 ID+IG+ R DS SGD EVQRTMLELLNQLDGF + IKVI ATNR DILDPAL+R GR+DRKIE P PS EARA IL+IHSR M + ++ + +A + +GA+LK VC EAGM ALR V EDF + +V K Sbjct: 247 IDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFELAVAKVLNK 390
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS10_CAEEL (Probable 26S protease regulatory subunit S10B OS=Caenorhabditis elegans GN=rpt-4 PE=1 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 4.273e-37 Identity = 77/145 (53.10%), Postives = 104/145 (71.72%), Query Frame = -2 Query: 292 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 726 IDAIG +RF S DRE+QRT++ELLNQLDGF S ++KVI ATNR D LDPAL+R GRLDRKIE+ P+E++R IL+IHS K+T H +++FE + + +D F+ A L+ VC EAGM A+R + V EDF + + +V K+ Sbjct: 252 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKR 396
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS10_SPETR (26S protease regulatory subunit S10B OS=Spermophilus tridecemlineatus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.581e-37 Identity = 76/145 (52.41%), Postives = 103/145 (71.03%), Query Frame = -2 Query: 292 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 726 IDAIG +RF S DRE+QRT++ELLNQ+DGF + R+K+I ATNR D LDPAL+R GRLDRKI + P+E+AR IL+IH+ +T H ++++E + + +D FNGA L+ VC EAGM A+R D V EDF + + +V KK Sbjct: 235 IDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKK 379
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS10_MOUSE (26S protease regulatory subunit S10B OS=Mus musculus GN=Psmc6 PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.581e-37 Identity = 76/145 (52.41%), Postives = 103/145 (71.03%), Query Frame = -2 Query: 292 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 726 IDAIG +RF S DRE+QRT++ELLNQ+DGF + R+K+I ATNR D LDPAL+R GRLDRKI + P+E+AR IL+IH+ +T H ++++E + + +D FNGA L+ VC EAGM A+R D V EDF + + +V KK Sbjct: 235 IDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKK 379
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS10_HUMAN (26S protease regulatory subunit S10B OS=Homo sapiens GN=PSMC6 PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.581e-37 Identity = 76/145 (52.41%), Postives = 103/145 (71.03%), Query Frame = -2 Query: 292 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 726 IDAIG +RF S DRE+QRT++ELLNQ+DGF + R+K+I ATNR D LDPAL+R GRLDRKI + P+E+AR IL+IH+ +T H ++++E + + +D FNGA L+ VC EAGM A+R D V EDF + + +V KK Sbjct: 235 IDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKK 379
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS8B_ARATH (26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.288e-37 Identity = 79/144 (54.86%), Postives = 104/144 (72.22%), Query Frame = -2 Query: 298 IDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 726 ID+IG+ R +S +GD EVQRTMLELLNQLDGF + ++IKV+ ATNR DILD AL+R GR+DRKIE P+P+EE+R IL+IHSRKM + ++ +++A + +GA+LKAVC EAGM ALR V EDF + +V K Sbjct: 263 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKK 406
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS8A_ARATH (26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana GN=RPT6A PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.288e-37 Identity = 79/144 (54.86%), Postives = 104/144 (72.22%), Query Frame = -2 Query: 298 IDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 726 ID+IG+ R +S +GD EVQRTMLELLNQLDGF + ++IKV+ ATNR DILD AL+R GR+DRKIE P+P+EE+R IL+IHSRKM + ++ +++A + +GA+LKAVC EAGM ALR V EDF + +V K Sbjct: 263 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKK 406
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.519e-37 Identity = 75/148 (50.68%), Postives = 103/148 (69.59%), Query Frame = -2 Query: 283 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL 726 IDAI KR D+ GDREVQRT+++LL ++DGF + +K+I ATNR DILDPA++R GR DR IE+P P E+ R IL+IH+RKM + DVN EE+A+ T+ GA+LKA+C EAGM A+R V +DF + + ++ KKK + Sbjct: 272 IDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIMEKKKVKV 419
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.624e-36 Identity = 73/148 (49.32%), Postives = 106/148 (71.62%), Query Frame = -2 Query: 283 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL 726 ID+IG KR DS SGDREVQRT+++LL ++DGF ++++AATNR DILDPAL+R GR DR I++P P+ EAR +IL+IH+RKM + DV+ ++A TD+ +GA L A+ +EAGM A+R + V+ DFN + +V ++ S+ Sbjct: 261 IDSIGAKRLDSITSGDREVQRTLVQLLAEMDGFDPRGNVRILAATNRPDILDPALLRPGRFDRMIKVPMPTAEAREQILKIHARKMNLADDVDLRKIALITDESSGADLSAIVMEAGMFAIRNNRDVVDSSDFNAAVAKVMGERNRSM 408
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.624e-36 Identity = 76/145 (52.41%), Postives = 102/145 (70.34%), Query Frame = -2 Query: 292 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 726 IDAIG +R SGDREVQRT+ +LL ++DGF D IKVIAATNR DILDPAL+R GR DR I++P P EE R I +IH+R M + DV+ ++LA+ T+ +GA +KA+C EAGM+A+R D V +DF + + +V KK+ Sbjct: 281 IDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDFLKAVDRVMGKKE 425 The following BLAST results are available for this feature:
BLAST of CN189408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 293
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189408 ID=CN189408; Name=CN189408; organism=Citrus sinensis; type=EST; length=727bpback to top |