CN189408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.775e-34 Identity = 73/140 (52.14%), Postives = 93/140 (66.43%), Query Frame = -2 Query: 307 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 726 +DAIG RFD V GD EVQRTMLE++NQLDGF + IKV+ ATNR D LDPAL+R GRLDRK+E P E R +I +IH+R M D+ FE LAR + GA +++VC EAGM A+R V +DF + + +V Sbjct: 270 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKV 409
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.775e-34 Identity = 73/140 (52.14%), Postives = 93/140 (66.43%), Query Frame = -2 Query: 307 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 726 +DAIG RFD V GD EVQRTMLE++NQLDGF + IKV+ ATNR D LDPAL+R GRLDRK+E P E R +I +IH+R M D+ FE LAR + GA +++VC EAGM A+R V +DF + + +V Sbjct: 270 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKV 409
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PSMR_METMA (Proteasome-activating nucleotidase OS=Methanosarcina mazei GN=pan PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.542e-34 Identity = 67/140 (47.86%), Postives = 99/140 (70.71%), Query Frame = -2 Query: 307 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 726 +D+I +R + DREVQRT+++LL ++DGF I++IAATNR D+LDPA++R GR DR + +P P EAR +IL+IH KMT+ D++F++LA++T+ +GA LKA+ EAGM A+RRD V E+F E + +V Sbjct: 261 LDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRRDKELVEMEEFLEAVEKV 400
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.851e-34 Identity = 71/145 (48.97%), Postives = 101/145 (69.66%), Query Frame = -2 Query: 292 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 726 IDA+ +KR +S GDREVQRT+++LL ++DGF S +K+IAATNR DILDPA++R GR DR IE+ P E+ R IL+IH+ KM + +V+ E+A+ ++ GA LKAVC EAGM A+R + + +DF E I ++ KK+ Sbjct: 250 IDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNL-KNVDLREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDDFKEAISKITGKKE 393
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.287e-33 Identity = 71/147 (48.30%), Postives = 100/147 (68.03%), Query Frame = -2 Query: 286 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKAS 726 IDA+ +KR +S GDREVQRT+++LL ++DGF S +K+IAATNR DILDPA++R GR DR IE+ P E+ R I +IH+ KM + V+ E+A+ ++ GA +KAVC EAGM A+R V +DF E +++V KK+ S Sbjct: 250 IDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEIAAPDEDGRLEIFKIHTDKMNI-KSVDLREIAKMAENMVGADIKAVCTEAGMFAIREGREYVTTKDFKEALLKVTGKKEKS 395
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.680e-33 Identity = 71/149 (47.65%), Postives = 100/149 (67.11%), Query Frame = -2 Query: 280 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN 726 IDAIG KR D SG+RE+QRT+++LL ++DGF D +K+IAATNR DILDPAL+R GR DR IE+P P+ E R I +I+ +KM ++ ++ LA T+ F+GA++K VC EAG +A+R VN D I +++AK + N Sbjct: 236 IDAIGAKRVDMGTSGEREIQRTLMQLLAEIDGFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLPNFEGRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIKNVCTEAGYIAIRNGRKYVNMTDLITAIEKIKAKNNKAKN 384
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.680e-33 Identity = 71/145 (48.97%), Postives = 100/145 (68.97%), Query Frame = -2 Query: 292 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 726 IDA+ +KR +S GDREVQRT+++LL ++DGF S +K+IAATNR DILDPA++R GR DR IE+ P E+ R IL+IH+ KM + V+ E+A+ ++ GA LKAVC EAGM A+R + + +DF E I ++ KK+ Sbjct: 250 IDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFREAISKITGKKE 393
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.680e-33 Identity = 70/133 (52.63%), Postives = 95/133 (71.43%), Query Frame = -2 Query: 328 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 726 IDAIG R ++ SGDREVQRT+++LL +DGF +K+I ATNR DILD AL+R GR DR IE+P P E R IL++H+R M + DV+ E+AR T+ NGA+L A+C+EAGM A+R++ +V+ EDF Sbjct: 255 IDAIGASRTEAMTSGDREVQRTLMQLLAAMDGFEPRGDVKIIGATNRIDILDAALLRPGRFDRIIEIPLPDTEGRYSILKVHTRCMNLSEDVDLMEVARLTEGRNGAELNAICMEAGMFAIRKEHPQVDQEDF 387
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.195e-33 Identity = 71/145 (48.97%), Postives = 100/145 (68.97%), Query Frame = -2 Query: 292 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 726 IDA+ +KR +S GDREVQRT+++LL ++DGF S +K+IAATNR DILDPA++R GR DR IE+ P E+ R IL+IH+ KM + V+ E+A+ ++ GA LKAVC EAGM A+R + + +DF E I ++ KK+ Sbjct: 250 IDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFREAITKITGKKE 393
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 2.195e-33 Identity = 67/140 (47.86%), Postives = 98/140 (70.00%), Query Frame = -2 Query: 307 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 726 +D+I +R + DREVQRT+++LL ++DGF I++IAATNR D+LDPA++R GR DR + +P P EAR +IL+IH KMT+ D++F++LA+ T+ +GA LKA+ EAGM A+R+D V EDF E + +V Sbjct: 261 LDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRKDKALVEMEDFLEAVEKV 400 The following BLAST results are available for this feature:
BLAST of CN189408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 293
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189408 ID=CN189408; Name=CN189408; organism=Citrus sinensis; type=EST; length=727bpback to top |