CN189408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.169e-32 Identity = 69/137 (50.36%), Postives = 91/137 (66.42%), Query Frame = -2 Query: 316 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI 726 IDAIG R +S SGDREV RT+++LL ++DGFS+ +++I ATNR DILD AL+R GR DR IE+P P E R IL IH M + V+ ++A TD NGA L+++C+EAGM A+R D V EDF + I Sbjct: 255 IDAIGASRTESNTSGDREVHRTLMQLLAEMDGFSNRGDVRIIGATNRIDILDRALLRPGRFDRIIEIPAPDIEGRVSILNIHCAGMNIDKKVDIRDIATRTDGKNGADLRSICMEAGMFAIRSDHEMVTLEDFEQSI 391
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS7B_ARATH (26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPT1B PE=3 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 3.169e-32 Identity = 72/140 (51.43%), Postives = 92/140 (65.71%), Query Frame = -2 Query: 307 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 726 IDAIG RFD V D EVQRTMLE+L QLDGF + IKV+ ATNR DILDPAL+R GRLDRK+E P E R +I +IH+R M+ D+ FE LA + GA +++VC+EAGM A+ V +DF + + +V Sbjct: 307 IDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKV 446
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS6B_MANSE (26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.139e-32 Identity = 72/151 (47.68%), Postives = 93/151 (61.59%), Query Frame = -2 Query: 274 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 726 IDAI TKRFD++ DREVQR +LELLNQ+DGF +KVI ATNRAD LDPAL+R GRLDRKIE P P + I + KM + +V+ EE D +GA + A+C EAGM A+R + V +DF +G K ++ +Y Sbjct: 264 IDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLEEFVARPDRVSGADINAICQEAGMNAVRENRYIVLPKDFEKGYKNNIKKDESEYEFY 414
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS10_SCHPO (Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe GN=rpt4 PE=2 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 4.139e-32 Identity = 71/145 (48.97%), Postives = 94/145 (64.83%), Query Frame = -2 Query: 292 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 726 IDAIG +RF S DRE+QRT++ELLNQ+DGF + K+I ATNR D LDPAL+R GRLDRKIE+P P+E R IL+IH K++ ++++E L + TD NGA L+ V EAG +A++ D V D +V KK Sbjct: 234 IDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSAARKVADLKK 378
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.059e-32 Identity = 72/145 (49.66%), Postives = 95/145 (65.52%), Query Frame = -2 Query: 292 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 726 IDAIG KR D G+REV RT+++LL ++DGF +KVIAATNR DILDPAL+R GR DR IE+P P E R IL++H+R+M + V+ +A T+ +GA LKA+ EAGM A+R T V EDF + I +V +K Sbjct: 239 IDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLR-GVDLRLIAELTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAIDKVLGNEK 382
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS10_YEAST (26S protease subunit RPT4 OS=Saccharomyces cerevisiae GN=RPT4 PE=1 SV=4) HSP 1 Score: 137.502 bits (345), Expect = 7.059e-32 Identity = 66/145 (45.52%), Postives = 94/145 (64.83%), Query Frame = -2 Query: 292 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 726 +DAIG +RF S DRE+QRT++ELL Q+DGF + + K+I ATNR D LDPAL+R GRLDRK+E+P P+E R I +IH+ K+ + +FE + +D FNGA ++ EAG A+R D +N +D + + +V KK Sbjct: 283 VDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAVRKVAEVKK 427
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.220e-32 Identity = 71/148 (47.97%), Postives = 96/148 (64.86%), Query Frame = -2 Query: 283 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL 726 IDAIG KR D G+REV RT+++LL ++DGF +KVIAATNR DILDPAL+R GR DR IE+P P E R IL++H+R+M + V+ +A T+ +GA LKA+ EAGM A+R T V EDF + + +V ++ L Sbjct: 242 IDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KGVDLRAIAEMTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNERKLL 388
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.220e-32 Identity = 71/148 (47.97%), Postives = 97/148 (65.54%), Query Frame = -2 Query: 283 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL 726 IDAIG KR D G+REV RT+++LL ++DGF +KVIAATNR DILDPAL+R GR DR IE+P P E R IL++H+R+M + +V+ +A T+ +GA LKA+ EAGM A+R T V EDF + + +V ++ L Sbjct: 242 IDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KNVDLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNERKLL 388
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS7_SCHPO (26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces pombe GN=rpt1 PE=1 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 9.220e-32 Identity = 74/153 (48.37%), Postives = 98/153 (64.05%), Query Frame = -2 Query: 277 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLAL---RRDATEVNHEDFNEGIIQVQAKKKASLNY 726 IDAIG RFD GD EVQRTMLEL+ QLDGF IKV+ ATNR + LD ALMR GR+DRK+E P E RA IL+IH++ M + D+ +E +AR GA+L++VC EAGM A+ RR ATE + D + +++ K ++ +Y Sbjct: 281 IDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKDFLDAVQKVVKGNQKFSSTADY 433
BLAST of CN189408 vs. ExPASy Swiss-Prot
Match: PRS6B_RAT (26S protease regulatory subunit 6B OS=Rattus norvegicus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.573e-31 Identity = 70/151 (46.36%), Postives = 94/151 (62.25%), Query Frame = -2 Query: 274 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 726 IDAI TKRFD++ DREVQR +LELLNQ+DGF + +KVI ATNRAD LDPAL+R GRLDRKIE P P + I + KM + +V+ E+ D +GA + ++C E+GMLA+R + V +DF + V K + +Y Sbjct: 267 IDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFY 417 The following BLAST results are available for this feature:
BLAST of CN189408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 293
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189408 ID=CN189408; Name=CN189408; organism=Citrus sinensis; type=EST; length=727bpback to top |