CN189402

Overview
NameCN189402
Unique NameCN189402
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189402 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.379e-16
Identity = 50/129 (38.76%), Postives = 73/129 (56.59%), Query Frame = -1
Query:  337 KVPKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVK---IPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLL----YPSY--YSFQDY 696
            K+  YP CP P+L  G+  HTD  GI LL+ ++ VPGL+ FKD  W     IP    + + V+ GDQ+  LSNGRY++ LHR   +K  +R+S   F  P  + I+ P  +L      P +  ++F+DY
Sbjct:  202 KINYYPPCPRPDLALGVPAHTDLSGITLLVPNE-VPGLQVFKDDHWFDAEYIP----SAVIVHIGDQILRLSNGRYKNVLHRTTVDKEKTRMSWPVFLEPPREKIVGPLPELTGDDNPPKFKPFAFKDY 325          
BLAST of CN189402 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.801e-16
Identity = 45/105 (42.86%), Postives = 63/105 (60.00%), Query Frame = -1
Query:  388 KVPKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWV--KIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAII 696
            K+  YP+CP PEL  G+  HTD   +  +L +  VPGL+ F +G+WV  K  P   N+I ++ GD +E+LSNG+Y+S LHR +  K   R S A F  P  + II
Sbjct:  217 KINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYEGQWVTAKCVP---NSIIMHIGDTIEILSNGKYKSILHRGVVNKEKVRFSWAIFCEPPKEKII 317          
BLAST of CN189402 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.072e-16
Identity = 44/105 (41.90%), Postives = 64/105 (60.95%), Query Frame = -1
Query:  388 KVPKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWV--KIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAII 696
            K+  YP+CP PEL  G+  HTD   +  +L +  VPGL+ F +G+WV  K  P   ++I ++ GD +E+LSNG+Y+S LHR +  K   R+S A F  P  D I+
Sbjct:  213 KINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYEGKWVTAKCVP---DSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIV 313          
BLAST of CN189402 vs. ExPASy Swiss-Prot
Match: FLS_MALDO (Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.012e-16
Identity = 50/135 (37.04%), Postives = 74/135 (54.81%), Query Frame = -1
Query:  298 KVPKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEW--VKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLLYPSYYSFQDYLKLYGTTKFSDKV 696
            K+  YP CP P+L  G+  HTD   + +L+ +D V GL+  KDG W  VK  P   N + ++ GDQ+E++SNG+Y S LHR    K+ +R+S   F  P  D ++ P     +P   +  +  K Y T K+ D V
Sbjct:  204 KINYYPPCPRPDLALGVVAHTDMSTVTILVPND-VQGLQACKDGRWYDVKYIP---NALVIHIGDQMEIMSNGKYTSVLHRTTVNKDKTRISWPVFLEPPADHVVGP-----HPQLVNAVNQPK-YKTKKYGDYV 328          
BLAST of CN189402 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 6.844e-16
Identity = 50/144 (34.72%), Postives = 75/144 (52.08%), Query Frame = -1
Query:  271 YPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLLY----PSYYS--FQDYLKLYGTTKFSDKVPRLESMKEI 684
            YP CP P+   G   H D   I LLL    V GLE    G+W+K+ P+ N  + VN G Q+EV++NG  +S  HR M     +R S+ATF  P  + +I PA + L     P Y +  F+D++++Y   K    +    ++K +
Sbjct:  194 YPSCPNPDKALGQPPHCDRNLITLLLPG-AVNGLEVSYKGDWIKVDPAPNAFV-VNFGQQLEVVTNGLLKSIEHRAMTNSALARTSVATFIMPTQECLIGPAKEFLSKENPPCYRTTMFRDFMRIYNVVKLGSSLNLTTNLKNV 335          
BLAST of CN189402 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.938e-16
Identity = 45/111 (40.54%), Postives = 57/111 (51.35%), Query Frame = -1
Query:  352 YPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLLYPSYY 684
            YP CP PE   G   H D   + +LLQDD V GLE   DGEW  + P     + +N GD    LSNGRY+S LHR +  +   R S+A F  P  D ++ P      P +Y
Sbjct:  234 YPPCPEPERTLGTGPHCDPTALTILLQDD-VGGLEVLVDGEWRPVSPVPGAMV-INIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPSAATPQHY 342          
BLAST of CN189402 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.938e-16
Identity = 45/111 (40.54%), Postives = 57/111 (51.35%), Query Frame = -1
Query:  352 YPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLLYPSYY 684
            YP CP PE   G   H D   + +LLQDD V GLE   DGEW  + P     + +N GD    LSNGRY+S LHR +  +   R S+A F  P  D ++ P      P +Y
Sbjct:  234 YPPCPEPERTLGTGPHCDPTALTILLQDD-VGGLEVLVDGEWRPVSPVPGAMV-INIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPSAATPQHY 342          
BLAST of CN189402 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.167e-15
Identity = 46/113 (40.71%), Postives = 65/113 (57.52%), Query Frame = -1
Query:  367 KVPKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVK---IPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLL 696
            K+  YP CP P+L  G+  HTD   I +L+ ++ VPGL+ +KDG W     IP    N + V+ GDQVE++SNG+Y+S  HR    K  +R+S   F  P  D  + P  KL+
Sbjct:  202 KINYYPPCPRPDLALGVA-HTDMSAITVLVPNE-VPGLQVYKDGHWYDCKYIP----NALIVHIGDQVEIMSNGKYKSVYHRTTVNKEKTRMSWPVFLEPPPDHEVGPIPKLV 308          
BLAST of CN189402 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.601e-15
Identity = 44/108 (40.74%), Postives = 63/108 (58.33%), Query Frame = -1
Query:  388 VGTKVPKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWV--KIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAII 705
            V  K+  YP+CP PEL  G   HTD   +  +L +  VPGL+ F + +WV  K  P   N+I ++ GD +E+LSNG+Y+S LHR +  K   R+S A F  P  + I+
Sbjct:  216 VQMKINFYPKCPQPELALGWEAHTDVSALTFILHN-MVPGLQLFYEDKWVTAKCVP---NSIIMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKEKIV 319          
BLAST of CN189402 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.601e-15
Identity = 43/109 (39.45%), Postives = 63/109 (57.80%), Query Frame = -1
Query:  367 YPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPA---NDAIISPAIKLL 684
            YP CP PEL  G  +HTD G + +LLQDD + GL+      WV +PP+  + + VN GD +++LSN +Y S  HR +    GSR+SI  F+  +   +  +  P  +LL
Sbjct:  221 YPPCPQPELTMGTIQHTDIGFVTILLQDD-MGGLQVLHQNHWVDVPPTPGSLV-VNIGDFLQLLSNDKYLSVEHRAISNNVGSRMSITCFFGESPYQSSKLYGPITELL 327          
The following BLAST results are available for this feature:
BLAST of CN189402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
FLS1_ARATH1.379e-1638.76Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
LDOX_PETHY1.801e-1642.86Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
LDOX_ARATH3.072e-1641.90Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
FLS_MALDO4.012e-1637.04Flavonol synthase/flavanone 3-hydroxylase OS=Malus... [more]
IDS3_HORVU6.844e-1634.722'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
GAOX2_ORYSJ8.938e-1640.54Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]
GAOX2_ORYSI8.938e-1640.54Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]
FLS_EUSGR1.167e-1540.71Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
LDOX_PERFR2.601e-1540.74Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
ACCH3_SOLLC2.601e-1539.451-aminocyclopropane-1-carboxylate oxidase homolog ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001M21_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001M21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189402 ID=CN189402; Name=CN189402; organism=Citrus sinensis; type=EST; length=708bp
TTTTTTTTTTTTTTTTTGAATAAGTAAACTGGTTGATTTTTATAACCTTA
TTAGTATATTCATCAGTATAGATGAATGATAAACATAGGAAATAGAAAGT
GTCATTTTCATCTCCTTTAGAATTTAACAACATAACTCTTTATGCTAGTT
AAGAATTTAAAGAACATATTCTATGCAGAAAACATAACAGCATCAAACTG
ATGATCCCTTACATAGCAATCATTTAAGTAGTCGATAATTTTATGAAAGG
AGGATCTGGTGTCCATTGGCAATCTCCTTCATGGATTCAAGTCTAGGGAC
CTTGTCTGAAAACTTGGTGGTGCCGTAAAGCTTCAGGTAGTCTTGAAAAC
TGTAGTAACTGGGGTATAAGAGTTTGATAGCTGGAGAAATAATAGCATCG
TTAGCAGGATTATAGAAGGTTGCAATGGAGAGTCTGCTTCCATTCTTTTC
AGGCATGACGCGGTGCAAAGCACTTTGATACCTCCCATTACTCAAAACTT
CCACTTGGTCACCTGTGTTAACAAATATGGTGTTGTTTCTGGATGGAGGG
ATCTTTACCCACTCTCCATCTTTGAAAAATTCAAGACCTGGAACTTGGTC
ATCTTGGAGCAAGAGGATGATTCCACCCGCGTCAGTGTGTTCTCGTAGTC
CTCTGACGAGTTCCGGATAAGGACATTGAGGGTATTTTGGTACTTTTGTC
CCCACAAA
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