CN189401
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189401 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.491e-63 Identity = 114/199 (57.29%), Postives = 139/199 (69.85%), Query Frame = 1 Query: 118 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVN--DPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVT 705 G T+ HATFY YG+LYS GYGT TAALSTALFN+G SCG C+ I C + D RWC G S+ +TATNFC GGWCNPP +HFD++QP +E+I Y+ GIVPV ++RV C +KGG+RF ING YF LV I NVGGAG +++VSIKGS+T W MSRNWG NWQSN+YL+GQ+LSF +T Sbjct: 25 GLTNGHATFYGGSDASGTMGGACGYGDLYSAGYGTMTAALSTALFNDGASCGECYRITCDHAADSRWCLKGASVVITATNFCPPNFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVVFQRVSCYKKGGVRFRINGRDYFELVNIQNVGGAGSIKSVSIKGSKTGWLAMSRNWGANWQSNAYLDGQALSFSIT 223
BLAST of CN189401 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 241.121 bits (614), Expect = 4.339e-63 Identity = 115/194 (59.28%), Postives = 134/194 (69.07%), Query Frame = 1 Query: 130 AHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC-VNDPRWCRPG--SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKV 702 A ATFY YGNLY+ GYG AALS+ALFN+G CGAC+ I C + +WC+PG SI +TATN C GGWCNPP+QHFD+SQP +E IA Y+AGIVPV+Y+RVPC R GGIRF I+GH YF LV +TNVGG+G V +SIKGS T W MSRNWG NWQSN+YL GQSLSF V Sbjct: 31 AFATFYGGKDGSGTMGGACGYGNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVTVTNVGGSGVVAQMSIKGSNTGWMAMSRNWGANWQSNAYLAGQSLSFIV 224
BLAST of CN189401 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 241.121 bits (614), Expect = 4.339e-63 Identity = 112/201 (55.72%), Postives = 139/201 (69.15%), Query Frame = 1 Query: 118 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVN--DPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSR--TDWQPMSRNWGQNWQSNSYLNGQSLSFKVT 705 GW+ ATFY YGNLY++GYGT TAALSTALF++G SCG C+ + C DPRWCR G S+ VTATNFC GGWCNPP+ HFD++QP +E+I Y+ GIVPV++RRVPC R+GG+RFT+ G YF LVL+TNV AG VR++ ++GSR W MSRNWG NWQS +YL+GQ LSF+VT Sbjct: 33 GWSKGTATFYGGSDASGTMGGACGYGNLYTQGYGTRTAALSTALFDDGASCGQCYALTCDARADPRWCRAGASVTVTATNFCPPNYALPSDDGGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRRVPCRRRGGVRFTVAGRDYFELVLVTNVAAAGSVRSMEVRGSRRGAGWMAMSRNWGANWQSLAYLDGQGLSFRVT 233
BLAST of CN189401 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 239.965 bits (611), Expect = 9.667e-63 Identity = 106/195 (54.36%), Postives = 135/195 (69.23%), Query Frame = 1 Query: 121 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVT 705 W DA ATFY YG+L+ +GYG TAALSTALFN G +CGAC++I CVNDP+WC PGS+ +TATNFC G WCNPPQ+HFDLS P+F +IAQYKAG+VPV YRR+ C+R GG++F G+ YF ++L NVGGAGD++ + +KG +T W M +NWGQNW + L GQ +SF+VT Sbjct: 48 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNFCPPDYSKTE--GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVT 240
BLAST of CN189401 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 239.965 bits (611), Expect = 9.667e-63 Identity = 108/195 (55.38%), Postives = 136/195 (69.74%), Query Frame = 1 Query: 121 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVT 705 W DA ATFY YGNL+ +GYG TAALSTALFN+G +CGAC+EI C DP+WC PGS+ +TATNFC WCNPPQ+HFDLS +F +IA+YKAG+VPV YRR+PCS+ GG++F G+ YF +VLI NVGGAGD++ V +KG++T W M +NWGQNW + + L GQ LSF+VT Sbjct: 52 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQNWTTITVLTGQGLSFRVT 244
BLAST of CN189401 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 239.58 bits (610), Expect = 1.263e-62 Identity = 112/198 (56.57%), Postives = 136/198 (68.69%), Query Frame = 1 Query: 115 QGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC-VNDPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKV 702 Q WT A ATFY YGN+YS GYGTNT ALS+AL+ +G SCGAC+ + C + RWC+ G S+ VTATN+C GGWCNPP++HFD+SQP +E IA Y +GIVPV Y R PC R GGIRF I GH Y+ LVL+TNV G+G V A +KGS T+W MSRNWG+NWQSN+YL GQ+LSF+V Sbjct: 25 QQWTSATATFYGGSDASGTMGGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGTSVTVTATNYCPPNYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALSFRV 222
BLAST of CN189401 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 238.424 bits (607), Expect = 2.813e-62 Identity = 107/195 (54.87%), Postives = 136/195 (69.74%), Query Frame = 1 Query: 121 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVT 705 W DA ATFY YGNL+ +GYG TAALSTALFN+G +CGAC+EI C DP+WC PGS+ +TATNFC WCNPPQ+HFDLS +F +IA+YKAG+VPV YRR+PCS+ GG++F G+ YF +VLI NVGGAGD++ V +K ++T W M +NWGQNW +++ L GQ LSF+VT Sbjct: 58 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKENKTGWITMKKNWGQNWTTSTVLTGQGLSFRVT 250
BLAST of CN189401 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 237.269 bits (604), Expect = 6.266e-62 Identity = 105/195 (53.85%), Postives = 135/195 (69.23%), Query Frame = 1 Query: 121 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVT 705 W DA ATFY YG+L+ +GYG TAALSTALFN G +CGAC++I CV+DP+WC PG+I +TATNFC G WCNPPQ+HFDLS P+F +IAQYKAG+VPV YRR+ C+R GG++F G+ YF ++L NVGGAGD++ + +KG +T W M +NWGQNW + L GQ +SF+VT Sbjct: 55 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVHDPQWCLPGTIKITATNFCPPDYSKTE--GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVT 247
BLAST of CN189401 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2) HSP 1 Score: 232.646 bits (592), Expect = 1.543e-60 Identity = 108/199 (54.27%), Postives = 135/199 (67.84%), Query Frame = 1 Query: 118 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC--VNDPRWCRPGS-IFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVT 705 GW ATFY YGNLY++GYG AALSTALFN G SCG C+ I C P WC+ G+ + +TATN C GGWCNPP+ HFD+SQP +E I Y+AGIVPV Y++V C R+GG+RFT++G +YF LVLITNV G+G V+A+S+KGS+T W P++RNWG NWQ NS L GQ+LSF+VT Sbjct: 26 GWVSGTATFYGGKDASGTMGGACGYGNLYTQGYGVYNAALSTALFNGGASCGQCYLIMCDASKTPEWCKAGTAVTITATNLCPPNWALANDDGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGSVQAMSVKGSKTGWIPLARNWGANWQCNSALVGQALSFRVT 224
BLAST of CN189401 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 232.261 bits (591), Expect = 2.016e-60 Identity = 107/196 (54.59%), Postives = 134/196 (68.37%), Query Frame = 1 Query: 118 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVT 705 GW ATFY YG+L+ +GYG TAALSTALFNNG CGAC+EI C + P+WC PGSI +TATNFC WCNPPQ+HFDLSQP+F +IA+YKAG+VPV +RRVPC++ GG++F I G+ +F ++L NVGGAG VRA+ IKG+RT W M +NWGQ W + L GQ LSF++T Sbjct: 89 GWGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPGSIKITATNFCPPDFTKPND--NWCNPPQKHFDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQIKGTRTQWIAMKKNWGQIWSTGVVLTGQCLSFRLT 282 The following BLAST results are available for this feature:
BLAST of CN189401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189401 ID=CN189401; Name=CN189401; organism=Citrus sinensis; type=EST; length=705bpback to top |