CN189386
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: IF4A1_HUMAN (Eukaryotic initiation factor 4A-I OS=Homo sapiens GN=EIF4A1 PE=1 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 6.104e-77 Identity = 145/218 (66.51%), Postives = 174/218 (79.82%), Query Frame = 2 Query: 14 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-EDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664 ++++E+ D+FD M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P I++FVLDEADEMLSRGFKDQIYDIFQ L QV + SATMP + LE+T+KFM P+RILVK++ELT Sbjct: 25 SNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELT 242
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: IF4A1_BOVIN (Eukaryotic initiation factor 4A-I OS=Bos taurus GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 6.104e-77 Identity = 145/218 (66.51%), Postives = 174/218 (79.82%), Query Frame = 2 Query: 14 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-EDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664 ++++E+ D+FD M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P I++FVLDEADEMLSRGFKDQIYDIFQ L QV + SATMP + LE+T+KFM P+RILVK++ELT Sbjct: 25 SNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELT 242
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: IF4A_AJECN (ATP-dependent RNA helicase eIF4A OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=TIF1 PE=3 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.041e-76 Identity = 140/217 (64.52%), Postives = 173/217 (79.72%), Query Frame = 2 Query: 14 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664 ++YDE+ D+FDAM L+ LLRG+YAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTATF LQ++D L CQAL+LAPTRELAQQI+KV+ A+GD++ ++ HAC+GG SVRED + L G VVVGTPGRV DM++R+ L+ D++++FVLDEADEMLS GF +QIYDIFQ LP QV + SATMP + LE+T KFM PVRILVK+ ELT Sbjct: 18 SNYDEITDSFDAMNLRAELLRGVYAYGFERPSAIQQRAIMPVIKGSDVIAQAQSGTGKTATFSISALQKVDTNLKACQALILAPTRELAQQIQKVVVAIGDFMSIECHACIGGISVREDMKALQDGPQVVVGTPGRVHDMIQRRVLKTDHMKMFVLDEADEMLSHGFTEQIYDIFQFLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKAELT 234
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: IF4A3_XENTR (Eukaryotic initiation factor 4A-III OS=Xenopus tropicalis GN=eif4a3 PE=2 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.041e-76 Identity = 147/221 (66.52%), Postives = 176/221 (79.64%), Query Frame = 2 Query: 5 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664 +F TS + +V TFD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATFC +LQ LD + E QAL+LAPTRELA QI+KV+ ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR I++ VLDEADEML++GFK+QIYD+++ LPP QV + SAT+P E LE+T KFM P+RILVKRDELT Sbjct: 31 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDELT 251
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: IF4A3_DANRE (Eukaryotic initiation factor 4A-III OS=Danio rerio GN=eif4a3 PE=2 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.041e-76 Identity = 147/221 (66.52%), Postives = 176/221 (79.64%), Query Frame = 2 Query: 5 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664 +F TS + +V TFD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATFC +LQ LD + E QAL+LAPTRELA QI+KV+ ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR I++ VLDEADEML++GFK+QIYD+++ LPP QV + SAT+P E LE+T KFM P+RILVKRDELT Sbjct: 22 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDELT 242
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: IF4A2_MACFA (Eukaryotic initiation factor 4A-II OS=Macaca fascicularis GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.041e-76 Identity = 146/218 (66.97%), Postives = 175/218 (80.28%), Query Frame = 2 Query: 14 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-EDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664 ++++E+ D FD M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQL+ E QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR E Q++ + H+VVGTPGRVFDML R+ L P I++FVLDEAD MLSRGFKDQIY+IFQ L IQV + SATMP + LE+T+KFM P+RILVK++ELT Sbjct: 27 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADGMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELT 244
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: I4A3A_XENLA (Eukaryotic initiation factor 4A-III-A OS=Xenopus laevis GN=eif4a3-A PE=2 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.041e-76 Identity = 147/221 (66.52%), Postives = 176/221 (79.64%), Query Frame = 2 Query: 5 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664 +F TS + +V TFD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATFC +LQ LD + E QAL+LAPTRELA QI+KV+ ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR I++ VLDEADEML++GFK+QIYD+++ LPP QV + SAT+P E LE+T KFM P+RILVKRDELT Sbjct: 31 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDELT 251
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: I4A3B_XENLA (Eukaryotic initiation factor 4A-III-B OS=Xenopus laevis GN=eif4a3-B PE=2 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 1.776e-76 Identity = 145/221 (65.61%), Postives = 177/221 (80.09%), Query Frame = 2 Query: 5 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664 +F TS + +V TFD MGL+E+LLRGIYAYGFEKPSAIQQ+ I KG DVI Q+QSGTGKTATFC +LQ LD + E QAL+LAPT+ELA+QI+KV+ ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR I++ VLDEADEML++GFK+QIYD+++ LPP QV + SAT+P E LE+T KFM P+RILVKRDELT Sbjct: 30 EFQTSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQKAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQIRETQALILAPTKELARQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDELT 250
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: IF4A3_SALSA (Eukaryotic initiation factor 4A-III OS=Salmo salar GN=eif4a3 PE=2 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 2.320e-76 Identity = 146/221 (66.06%), Postives = 176/221 (79.64%), Query Frame = 2 Query: 5 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664 +F TS + +V TFD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATFC +LQ LD + E QAL+LAPTRELA QI+KV+ ALGDY+ V+ H+C+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR I++ VLDEADEML++GFK+QIYD+++ LPP QV + SAT+P E LE+T KFM P+RILVKRDELT Sbjct: 22 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHSCIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDELT 242
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: IF4A_EMENI (ATP-dependent RNA helicase eIF4A OS=Emericella nidulans GN=tif1 PE=3 SV=1) HSP 1 Score: 284.263 bits (726), Expect = 3.957e-76 Identity = 136/217 (62.67%), Postives = 174/217 (80.18%), Query Frame = 2 Query: 14 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664 ++YDE+ D+FD+M L+ LLRG+YAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTATF LQ+LD + CQAL++APTRELAQQI+KV+ A+GD++ ++ HAC+GGT+VR+D L G +VVGTPGR+ DM++R+ L+ D +++F+LDEADEMLSRGF +QIYDIFQLLP QV + SATMP + LE+T KFM PVRILVK+ ELT Sbjct: 41 SNYDEITDSFDSMELKPELLRGVYAYGFERPSAIQQRAILPIVKGNDVIAQAQSGTGKTATFSISALQKLDPNVKACQALIVAPTRELAQQIQKVVIAIGDFMNIQCHACIGGTAVRDDMNALREGPQIVVGTPGRIHDMIQRRVLKTDQMKMFILDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKQELT 257 The following BLAST results are available for this feature:
BLAST of CN189386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189386 ID=CN189386; Name=CN189386; organism=Citrus sinensis; type=EST; length=664bpback to top |