CN189386
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: IF4A3_HUMAN (Eukaryotic initiation factor 4A-III OS=Homo sapiens GN=EIF4A3 PE=1 SV=4) HSP 1 Score: 279.641 bits (714), Expect = 9.746e-75 Identity = 145/221 (65.61%), Postives = 174/221 (78.73%), Query Frame = 2 Query: 5 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664 +F TS + +V TFD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATF +LQ LD + E QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR I++ VLDEADEML++GFK+QIYD+++ LPP QV + SAT+P E LE+T KFM P+RILVKRDELT Sbjct: 27 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELT 247
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: IF4A3_CHICK (Eukaryotic initiation factor 4A-III OS=Gallus gallus GN=EIF4A3 PE=2 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 9.746e-75 Identity = 145/221 (65.61%), Postives = 174/221 (78.73%), Query Frame = 2 Query: 5 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664 +F TS + +V TFD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATF +LQ LD + E QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR I++ VLDEADEML++GFK+QIYD+++ LPP QV + SAT+P E LE+T KFM P+RILVKRDELT Sbjct: 28 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELT 248
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: IF4A3_BOVIN (Eukaryotic initiation factor 4A-III OS=Bos taurus GN=EIF4A3 PE=2 SV=3) HSP 1 Score: 279.641 bits (714), Expect = 9.746e-75 Identity = 145/221 (65.61%), Postives = 174/221 (78.73%), Query Frame = 2 Query: 5 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664 +F TS + +V TFD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATF +LQ LD + E QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR I++ VLDEADEML++GFK+QIYD+++ LPP QV + SAT+P E LE+T KFM P+RILVKRDELT Sbjct: 27 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELT 247
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: IF4A_CRYNE (ATP-dependent RNA helicase eIF4A OS=Cryptococcus neoformans GN=TIF1 PE=3 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 1.662e-74 Identity = 141/217 (64.98%), Postives = 172/217 (79.26%), Query Frame = 2 Query: 14 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664 ++++EV D FD M L+ LLRGIYAYGFE+PSAIQQR I+P G D I QAQSGTGKTATF ILQ++D + + QALVLAPTRELAQQI+KV+ ALGDYL V HACVGGT+VRED L+ G H+VVGTPGRVFDM+ R +L+ + + +F LDEADEMLS GFK+ IY+IFQLLP + QV + SATM PE L++T+KFM P+RILVK+DELT Sbjct: 21 SNWNEVVDNFDDMKLKGELLRGIYAYGFERPSAIQQRAIMPIVTGRDCIAQAQSGTGKTATFSVSILQRIDTTVKKTQALVLAPTRELAQQIQKVVIALGDYLNVDCHACVGGTAVREDIARLNEGPHIVVGTPGRVFDMINRGALKTEAVMMFCLDEADEMLSTGFKESIYEIFQLLPGETQVVLLSATMAPEVLDVTKKFMRDPIRILVKKDELT 237
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: IF4A3_MACFA (Eukaryotic initiation factor 4A-III OS=Macaca fascicularis GN=EIF4A3 PE=2 SV=3) HSP 1 Score: 276.174 bits (705), Expect = 1.078e-73 Identity = 143/221 (64.71%), Postives = 172/221 (77.83%), Query Frame = 2 Query: 5 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664 +F TS + +V TFD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATF +LQ LD + E QAL+LAP RELA QI+K + LGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR I++ VLDEADEML++GFK+QIYD+++ LPP QV + SAT+P E LE+T KFM P+RILVKRDELT Sbjct: 27 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPARELAVQIQKGLLTLGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELT 247
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: IF4A_YARLI (ATP-dependent RNA helicase eIF4A OS=Yarrowia lipolytica GN=TIF1 PE=3 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 1.838e-73 Identity = 135/217 (62.21%), Postives = 168/217 (77.42%), Query Frame = 2 Query: 14 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664 T+YDEV +FD +GL++ LLRGIY YGFE PS+IQQR I+P KG DV+ QAQSGTGKTATF LQ +D + + QAL++APTRELA QI+KV+ A G+Y+ ++ HAC+GGTSV ED R++ GVHV+VGTPGR+ DM+ R+ L+ D I++F+LDEADEMLSR FKD IYDIF LP Q + SATMP E L+IT KFM PVRILVK+DELT Sbjct: 15 TNYDEVVTSFDDLGLKDELLRGIYGYGFENPSSIQQRAILPVIKGNDVLAQAQSGTGKTATFSISALQNIDEKIKKPQALIIAPTRELAHQIQKVVLAFGEYMKIECHACIGGTSVAEDIRVIQEGVHVIVGTPGRIHDMIERRILKTDLIKMFILDEADEMLSREFKDPIYDIFTTLPETTQTVLLSATMPAEVLDITGKFMRDPVRILVKKDELT 231
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: FAL1_CRYNE (ATP-dependent RNA helicase FAL1 OS=Cryptococcus neoformans GN=FAL1 PE=3 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 1.838e-73 Identity = 139/212 (65.57%), Postives = 169/212 (79.72%), Query Frame = 2 Query: 29 VYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664 V TF+A+ L+E+LLRGIYAY FEKPSAIQQR I+P +G DVI QAQSGTGKTATF +LQ +D L E QALVL+PTRELA QI+ V+ ALGDY+ V HAC+GGTSV ED R L +G VV GTPGRVFDM+RR++LR +I++ +LDE+DE+L++GFKDQIYDI++ LPP QV V SAT+P + LE+T KFM PVRILVKRDELT Sbjct: 21 VAPTFEALNLKEDLLRGIYAYNFEKPSAIQQRAIIPIIRGRDVIAQAQSGTGKTATFSISMLQSIDTNLRETQALVLSPTRELAVQIQTVVLALGDYMNVSCHACIGGTSVGEDIRKLEAGQQVVSGTPGRVFDMIRRRNLRTKDIKMLILDESDELLNKGFKDQIYDIYRYLPPATQVVVVSATLPHDVLEMTTKFMTDPVRILVKRDELT 232
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: RH34_ORYSJ (DEAD-box ATP-dependent RNA helicase 34 OS=Oryza sativa subsp. japonica GN=Os03g0566800 PE=2 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 5.348e-73 Identity = 134/213 (62.91%), Postives = 168/213 (78.87%), Query Frame = 2 Query: 26 EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664 EV +FD MG++E+LLRGIYAYGFEKPSAIQQR ++P G DVI QAQSGTGKT+ + Q +D + E QAL+L+PTRELA Q E+VM A+GDY+ ++VHAC+GG S+ ED R L GVHVV GTPGRV DM++R++LR I++ +LDEADEML RGFKDQIYD+++ LPP++QV + SAT+P E LE+T KFM PVRILVKRDELT Sbjct: 28 EVISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDYINIQVHACIGGKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRYLPPELQVCLISATLPHEILEMTSKFMTDPVRILVKRDELT 240
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: RH2_ORYSJ (DEAD-box ATP-dependent RNA helicase 2 OS=Oryza sativa subsp. japonica GN=Os01g0639100 PE=2 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 3.466e-72 Identity = 132/213 (61.97%), Postives = 168/213 (78.87%), Query Frame = 2 Query: 26 EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664 EV +FD MG++++LLRGIYAYGFEKPSAIQQR ++P G DVI QAQSGTGKT+ + Q +D + E QAL+L+PTRELA Q E+VM A+GD++ ++VHAC+GG S+ ED R L GVHVV GTPGRV DM++R++LR I++ +LDEADEML RGFKDQIYD+++ LPP++QV + SAT+P E LE+T KFM PVRILVKRDELT Sbjct: 28 EVISSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDFINIQVHACIGGKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRYLPPELQVCLISATLPHEILEMTSKFMTDPVRILVKRDELT 240
BLAST of CN189386 vs. ExPASy Swiss-Prot
Match: FAL1_COCIM (ATP-dependent RNA helicase FAL1 OS=Coccidioides immitis GN=FAL1 PE=3 SV=2) HSP 1 Score: 270.396 bits (690), Expect = 5.913e-72 Identity = 140/221 (63.35%), Postives = 169/221 (76.47%), Query Frame = 2 Query: 5 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT 664 +F TS + V TFD M L+ENLLRGIYAYGFE PSAIQ R IV CKG D I QAQSGTGKTATF ILQ +D L E QALVL+PTRELA QI+ V+ A+GDY+ V+ HAC+GGT+V +D R L G HVV GTPGRV DM+RR+ LR +I++ VLDEAD++L+RGF++QIYD+++ LPP QV V SAT+P + L +T KFM PVRILVKRDELT Sbjct: 14 EFTTSKEVTVAPTFDDMHLKENLLRGIYAYGFESPSAIQSRAIVQICKGRDTIAQAQSGTGKTATFAISILQVIDTALRETQALVLSPTRELATQIQNVIMAVGDYMNVQCHACIGGTNVGDDIRKLDHGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADDLLARGFREQIYDVYRYLPPATQVVVLSATLPYDVLSMTTKFMTDPVRILVKRDELT 234 The following BLAST results are available for this feature:
BLAST of CN189386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189386 ID=CN189386; Name=CN189386; organism=Citrus sinensis; type=EST; length=664bpback to top |