EY676446

Overview
NameEY676446
Unique NameEY676446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length991
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY676446 vs. ExPASy Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.729e-57
Identity = 108/207 (52.17%), Postives = 139/207 (67.15%), Query Frame = 3
Query:    3 HLRQIQGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKID*SKTPFLCLLQKI*N*GAAQFRNQQTVPRNPGTWWEGKK 617
            H +Q  GG  +QL+LD+ +G GF SK  YLFG  SM IKL  GD+AG VTAFY++S T N  DE+DFEFLGNRTGQP  +QTN++  GKG+REQR+ LWFDP+  YH Y+ILWN + IVF+VD++PIR +KN+      FP NQPM +YS+LW ADDWATRGGLEK + +  PF+   +     G       +        WW+ K+
Sbjct:   47 HQKQFNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSS-TNNEHDEIDFEFLGNRTGQPAILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSILWNMYQIVFFVDNIPIRTFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFVASYKGFHIDGCQASVEAKYCATQGRMWWDQKE 252          
BLAST of EY676446 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 4.655e-57
Identity = 106/179 (59.22%), Postives = 127/179 (70.95%), Query Frame = 3
Query:    3 HLRQIQGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTEN--VRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAP----FPMNQPMGVYSTLWEADDWATRGGLEKID*SKTPFL 521
            H      G    L LD ++GCGF +K  Y FG  SMK+KLV GDSAG VTA+YM S       RDE+DFEFLGNRTGQPY +QTN+Y NG G+RE R +LWFDP  DYH Y+ILWN+H +VF+VD VPIRVYKNS + P    FP  +PM ++S++W ADDWATRGGLEK D  K PF+
Sbjct:   37 HFTTSDDGEIWNLSLDNDTGCGFQTKHMYRFGWFSMKLKLVGGDSAGVVTAYYMCSENGAGPERDEIDFEFLGNRTGQPYIIQTNVYKNGTGNREMRHSLWFDPTKDYHTYSILWNNHQLVFFVDRVPIRVYKNSDKVPNNDFFPNQKPMYLFSSIWNADDWATRGGLEKTDWKKAPFV 215          
BLAST of EY676446 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 1.146e-55
Identity = 99/170 (58.24%), Postives = 127/170 (74.71%), Query Frame = 3
Query:   15 IQGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKID*SKTPF 518
            +  G  + L LD+ SG GF +K++YLFG++ M++KLVPG+SAGTVTA+Y+ S  +   DE+DFEFLGN TG PYT+ TN+Y  GKGDREQ+ +LWFDP AD+H Y++LWN HHIVF VDD+P+R +KN       +P  QPM +YS+LW AD WATRGGL K D SK PF
Sbjct:   46 LNNGELLTLSLDRASGSGFQTKKEYLFGKIDMQLKLVPGNSAGTVTAYYLKSKGDTW-DEIDFEFLGNLTGDPYTMHTNVYTQGKGDREQQFHLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKNLQHMGIQYPKLQPMRLYSSLWNADQWATRGGLVKTDWSKAPF 214          
BLAST of EY676446 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.497e-55
Identity = 99/168 (58.93%), Postives = 128/168 (76.19%), Query Frame = 3
Query:   21 GGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKID*SKTPF 518
            GG  + L LDQ SG GF SK++YLFGR+ M++KLV G+SAGTVTA+Y++S      DE+DFEFLGN TG+PY + TN++A GKGDREQ+  LWFDP  ++H Y+I+W   HI+F VD++PIRV+ N+ +   PFP +QPM +YS+LW ADDWATRGGL K D SK PF
Sbjct:   46 GGNMLSLSLDQVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGAT-HDEIDFEFLGNETGKPYVLHTNVFAQGKGDREQQFYLWFDPTKNFHTYSIVWRPQHIIFLVDNLPIRVFNNAEKLGVPFPKSQPMRIYSSLWNADDWATRGGLVKTDWSKAPF 212          
BLAST of EY676446 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 2.554e-55
Identity = 98/168 (58.33%), Postives = 129/168 (76.79%), Query Frame = 3
Query:   21 GGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKID*SKTPF 518
            GG+ + L LD+ SG GF SK++YLFGR+ M++KLV G+SAGTVTA+Y++S      DE+DFEFLGN TG+PY + TN++A GKG+REQ+  LWFDP  ++H Y+++W   HI+F VD+VPIRV+ N+ +   PFP NQPM +YS+LW ADDWATRGGL K D SK PF
Sbjct:   45 GGKMLSLSLDRVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSEGPT-HDEIDFEFLGNETGKPYVLHTNVFAQGKGNREQQFYLWFDPTKNFHTYSLVWRPQHIIFMVDNVPIRVFNNAEQLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSKAPF 211          
BLAST of EY676446 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.268e-54
Identity = 104/202 (51.49%), Postives = 141/202 (69.80%), Query Frame = 3
Query:   21 GGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKID*SKTPFLCLLQKI*N*GAAQFRNQQTVPRNPGTWWEGKKI 620
            GG+ + L LD+ SG GF SK++YLFGR+ M++KLV G+SAGTVTA+Y++S      DE+DFEFLGN +G PY + TNI+  GKG+REQ+  LWFDP  ++H Y+I+W   HI+F VD+ PIRV+KN+     PFP NQPM +YS+LW ADDWATRGGL K D SK PF    +   N  A +F ++ ++  N G  +E  ++
Sbjct:   50 GGQLLSLSLDKVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGPT-HDEIDFEFLGNLSGDPYILHTNIFTQGKGNREQQFYLWFDPTRNFHTYSIIWKPQHIIFLVDNTPIRVFKNAEPLGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYR---NFKAIEFSSKSSI-SNSGAEYEANEL 246          
BLAST of EY676446 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.656e-54
Identity = 101/198 (51.01%), Postives = 134/198 (67.68%), Query Frame = 3
Query:   18 QGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKID*SKTPFLCLLQKI*N*GAAQFRNQQTVPRNPGTWW 605
            + G+ +   LD+ SG GF SK++YLFG++ MK+KLV G+SAGTVTA+Y++S      DE+DFEFLGNRTG PYT+ TN++  GKGDRE +  LWFDP AD+H YT+ WN  +I+F VD +PIRV+KN+ +    +P NQPM +YS+LWEADDWAT GG  KID S  PF    +         F +Q +  R   + W
Sbjct:   47 ENGQLLTCTLDKVSGSGFQSKKEYLFGKIDMKLKLVAGNSAGTVTAYYLSSKG-TAWDEIDFEFLGNRTGHPYTIHTNVFTGGKGDREMQFRLWFDPTADFHTYTVHWNPVNIIFLVDGIPIRVFKNNEKNGVAYPKNQPMRIYSSLWEADDWATEGGRVKIDWSNAPFKASYR--------NFNDQSSCSRTSSSKW 235          
BLAST of EY676446 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 6.291e-54
Identity = 102/171 (59.65%), Postives = 126/171 (73.68%), Query Frame = 3
Query:   15 IQGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKID*SKTPFL 521
            +  G   +L LD  SG GF S+ +YLFG+VS++IKLV GDSAGTVTAFYM+S+  N  +E DFEFLGN TG+PY VQTNIY NG G+REQR+NLWFDP  ++H Y+ILW+   +VF VD+ PIRV KN      PF  +Q MGVYS++W ADDWAT+GGL K D S  PF+
Sbjct:   43 VNEGEVTKLKLDNYSGAGFESRSKYLFGKVSIQIKLVEGDSAGTVTAFYMSSDGPN-HNEFDFEFLGNTTGEPYIVQTNIYVNGVGNREQRLNLWFDPTTEFHTYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVYSSIWNADDWATQGGLVKTDWSHAPFV 212          
BLAST of EY676446 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 6.291e-54
Identity = 96/169 (56.80%), Postives = 127/169 (75.15%), Query Frame = 3
Query:   18 QGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKID*SKTPF 518
            + G+ +   LD+ SG GF SK++YLFG++ MKIKLVPG+SAGTVTA+Y++S  E   DE+DFEFLGN TGQPY + TN++  GKG+RE +  LWFDP AD+H YT+LWN  +I+F VD +PIRV+KN  +    +P +QPM +YS+LWEADDWAT+GG  K D +  PF
Sbjct:   44 ESGQLLTCTLDKTSGSGFQSKKEYLFGKIDMKIKLVPGNSAGTVTAYYLSSKGETW-DEIDFEFLGNVTGQPYVIHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPF 211          
BLAST of EY676446 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 8.216e-54
Identity = 99/177 (55.93%), Postives = 129/177 (72.88%), Query Frame = 3
Query:   15 IQGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKID*SKTPFLCLLQKI 539
            +  G+ + L LD++SG GF SK +YLFG++ M+IKLVPG+SAGTVT FY+ S   +  DE+DFEFLGN +G PYT+ TN+Y  GKGD+EQ+ +LWFDP A++H Y+ILWN   I+  VDD PIR +KN  S    FP N+PM +Y++LW ADDWATRGGL K D SK PF+   + I
Sbjct:   40 LNNGQLLTLSLDKSSGSGFQSKTEYLFGKIDMQIKLVPGNSAGTVTTFYLKSEG-STWDEIDFEFLGNMSGDPYTLHTNVYTQGKGDKEQQFHLWFDPTANFHTYSILWNPQRIILTVDDTPIREFKNYESLGVLFPKNKPMRMYASLWNADDWATRGGLVKTDWSKAPFMASYRNI 215          
The following BLAST results are available for this feature:
BLAST of EY676446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH4_ARATH2.729e-5752.17Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH8_ARATH4.655e-5759.22Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH25_ARATH1.146e-5558.24Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH15_ARATH1.497e-5558.93Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH16_ARATH2.554e-5558.33Probable xyloglucan endotransglucosylase/hydrolase... [more]
BRU1_SOYBN1.268e-5451.49Brassinosteroid-regulated protein BRU1 OS=Glycine ... [more]
XTH14_ARATH1.656e-5451.01Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH9_ARATH6.291e-5459.65Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH12_ARATH6.291e-5456.80Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH24_ARATH8.216e-5455.93Xyloglucan endotransglucosylase/hydrolase protein ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-022-G06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676446 ID=EY676446; Name=EY676446; organism=Citrus sinensis; type=EST; length=991bp
CCCATCTCAGGCAAATCCAGGGAGGGAGGGCCATCCAGCTAGTTCTAGAC
CAAAATTCAGGATGTGGGTTTGCCTCCAAAAGGCAGTACTTGTTCGGGCG
TGTAAGCATGAAGATCAAGCTCGTTCCTGGAGACTCTGCTGGAACTGTCA
CTGCATTTTATATGAATTCCAACACCGAAAATGTGAGAGACGAGCTTGAT
TTTGAGTTCCTGGGAAACCGAACGGGTCAGCCTTACACGGTCCAGACCAA
TATCTATGCAAATGGAAAAGGCGATAGAGAACAGAGAGTGAACCTCTGGT
TTGACCCTGCTGCAGATTATCACCTTTACACTATTCTCTGGAACCATCAC
CATATTGTCTTCTATGTGGATGATGTGCCCATCAGGGTTTACAAAAACAG
TGGAAGGGCTCCATTTCCAATGAACCAACCCATGGGGGTGTATTCAACGC
TGTGGGAAGCAGATGACTGGGCAACAAGAGGTGGTCTAGAGAAAATAGAT
TGAAGCAAAACTCCTTTTTTATGCTTATTACAGAAAATTTGAAATTGAGG
GGCTGCCCAGTTCCGGAACCAGCAAACTGTGCCTCGAAACCCAGGTACCT
GGTGGGAAGGCAAAAAAATAACCAAGCCCCTCCCCCCCCTGGGAAAACAA
AAAAAAAACAAAAAGGGGTTCCGTCCCCAACCCCCCTTGATTTTTGGATT
TTTTTGGCCCTGGATAAATCAAAAAACCCCCCGTTCCCCCCCCCCGGGAA
AGGCCCTTTGGCGGCCATAAAAAATTTTCAACCCCCCCCAATTTATATTT
AAACCTTTTGGGGGAGGGGGAACCCCCAAAACCCCCGTTTACTAAAAACC
ATGGGATATATTTATTTCCCCCCGTATCCCCCCCCCCTTTTTTTTTTATT
ATTTTTCCCCTATTTTTCTTTGGGGGAAAAAAAAAAAACATATTATACTC
ACCACCTAATTATAAGAGGGGGGGGGGGGGGGGGGGGGGGG
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