CN189370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189370 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.659e-11 Identity = 35/109 (32.11%), Postives = 53/109 (48.62%), Query Frame = -1 Query: 364 PEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 690 P+ + + ++F AIW WMT + ++PS H+ +G W P+ DT + R P +G NI+ G C G A+ + + Y Y +L V E L C QK F Sbjct: 148 PDLVATDPIISFRTAIWFWMT-AQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYCGMLNV-----PTGENLDCNNQKNF 250
BLAST of CN189370 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.167e-11 Identity = 40/110 (36.36%), Postives = 57/110 (51.82%), Query Frame = -1 Query: 364 PEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMN-NIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 690 PE +E + +AF+ A+W WMTP + +PS H +W P+ D+ + R P +G NI+ G CGQG + N N + Y Y D LG G N L C +Q+ F Sbjct: 189 PELVETDPFIAFKTALWFWMTP-QSPKPSCHAVITESWTPSAADSEAGRVPGYGVITNIINGGIECGQGGPNNANENRIGFYKTYCDSLGT---TYGSN--LDCYQQRPF 292
BLAST of CN189370 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.830e-11 Identity = 35/109 (32.11%), Postives = 53/109 (48.62%), Query Frame = -1 Query: 364 PEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLLGVGREQAGPNEELSCAEQKAF 690 P+ + + T++F+ A+W WMT + +PS+H G W P+ D + R P FG NI+ G CG G + + + Y Y D+L VG L C Q+ F Sbjct: 218 PDLVATDPTVSFKTAMWFWMT-AQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILRVGY-----GNNLDCYNQRPF 320
BLAST of CN189370 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.697e-11 Identity = 29/84 (34.52%), Postives = 47/84 (55.95%), Query Frame = -1 Query: 439 PEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYY 690 P+ + + ++F++AIW WMTP + +PS HD +G W+P+ D + R P FG NI+ G CG+G + + + Y Y Sbjct: 217 PDLVATDPVISFKSAIWFWMTP-QSPKPSCHDVIIGRWQPSAADRAANRLPGFGVITNIINGGLECGRGSDSRVQDRIGFYRRY 299 The following BLAST results are available for this feature:
BLAST of CN189370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189370 ID=CN189370; Name=CN189370; organism=Citrus sinensis; type=EST; length=690bpback to top |