CN189366
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.887e-34 Identity = 61/94 (64.89%), Postives = 75/94 (79.79%), Query Frame = 2 Query: 404 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSN 685 GGWCNPP +HFD++QP +E+I Y+ GIVPV ++RV C +KGG+RF ING YF LV I NVGGAG +++VSIKGS+T W MSRNWG NWQSN Sbjct: 117 GGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVVFQRVSCYKKGGVRFRINGRDYFELVNIQNVGGAGSIKSVSIKGSKTGWLAMSRNWGANWQSN 210
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 1.980e-33 Identity = 58/94 (61.70%), Postives = 74/94 (78.72%), Query Frame = 2 Query: 404 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRT-DWQPMSRNWGQNWQS 682 GGWCNPP+ HFD++QP +E+I Y AGI+PV Y+RVPC +KGG+RFTINGH YF LVL+TNV AG ++++ + GS T DW PM+RNWG W S Sbjct: 130 GGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGHDYFQLVLVTNVAAAGSIKSMEVMGSNTADWMPMARNWGAQWHS 223
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 2.586e-33 Identity = 59/94 (62.77%), Postives = 75/94 (79.79%), Query Frame = 2 Query: 404 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSR-TDWQPMSRNWGQNWQS 682 GGWCNPP+ HFD++QP +E+I Y+AGI+PV Y+RVPC +KGG+RFTINGH YFNLVL+TNV G ++++ + GS TDW PM RNWG NW S Sbjct: 143 GGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGLIKSMDVMGSNSTDWLPMVRNWGANWHS 236
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 2.586e-33 Identity = 57/95 (60.00%), Postives = 76/95 (80.00%), Query Frame = 2 Query: 401 AGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRT-DWQPMSRNWGQNWQS 682 +GGWCNPP+ HFD++QP +E+I Y+ GI+PV Y+RVPC +KGG+RFTINGH YF LVL+TNVG AG ++A+ +KGS++ DW M+ NWG W S Sbjct: 124 SGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSIKAMDVKGSKSPDWMAMAHNWGAQWHS 218
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 7.524e-33 Identity = 59/93 (63.44%), Postives = 74/93 (79.57%), Query Frame = 2 Query: 404 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQS 682 GGWCNPP++HFD+SQP +E+I Y+AGIVPV YRRV C R+GG+RFT+ G +F LVL+ NV G+G V AVS++G+ T W MSRNWG NWQS Sbjct: 118 GGWCNPPRRHFDMSQPAWERIGVYRAGIVPVLYRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAGTGWLQMSRNWGANWQS 210
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.676e-32 Identity = 58/95 (61.05%), Postives = 74/95 (77.89%), Query Frame = 2 Query: 404 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSR--TDWQPMSRNWGQNWQS 682 GGWCNPP+ HFD++QP +E+I Y+ GIVPV++RRVPC R+GG+RFT+ G YF LVL+TNV AG VR++ ++GSR W MSRNWG NWQS Sbjct: 125 GGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRRVPCRRRGGVRFTVAGRDYFELVLVTNVAAAGSVRSMEVRGSRRGAGWMAMSRNWGANWQS 219
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 2.859e-32 Identity = 61/93 (65.59%), Postives = 73/93 (78.49%), Query Frame = 2 Query: 404 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQS 682 GGWCNPP+ HFD+SQP +EQI Y+AGIVPV Y+RV C R+GG+RFT+ G +YF LVLITNV G+G V + IKG+ T W MSRNWG NWQS Sbjct: 119 GGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNWGANWQS 211
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.877e-32 Identity = 60/95 (63.16%), Postives = 77/95 (81.05%), Query Frame = 2 Query: 404 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTD-WQPMSRNWGQNWQSN 685 GGWCNPP+ HFD++QP F IA+YKAGIVP+ Y++V C R GG+RFTING +YF LVLI+NV G G++ V IKGS+++ W+ MSRNWG N+QSN Sbjct: 119 GGWCNPPRPHFDMAQPAFLTIAKYKAGIVPILYKKVGCRRSGGMRFTINGRNYFELVLISNVAGGGEISKVWIKGSKSNKWETMSRNWGANYQSN 213
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 4.877e-32 Identity = 57/94 (60.64%), Postives = 76/94 (80.85%), Query Frame = 2 Query: 404 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSN 685 GGWCNPP+ HFD+++P + QI YKAGIVPV Y+RVPC ++GG+RFT+ G +YF LVLI+NV G+G +++V +KG TD P+SRNWG NWQS+ Sbjct: 123 GGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSVWVKGPNTDRMPLSRNWGANWQSH 216
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.419e-31 Identity = 53/94 (56.38%), Postives = 78/94 (82.98%), Query Frame = 2 Query: 401 AGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQS 682 AGGWCNPP+ HFD+++P F ++A ++AGI+PV+YRRVPC R GG+RF G+SY+ L+ + NVGGAGD++++++KGSRT+W MS NWG ++Q+ Sbjct: 124 AGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQA 217 The following BLAST results are available for this feature:
BLAST of CN189366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189366 ID=CN189366; Name=CN189366; organism=Citrus sinensis; type=EST; length=685bpback to top |