CN189366
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 3.161e-31 Identity = 55/89 (61.80%), Postives = 72/89 (80.90%), Query Frame = 2 Query: 410 WCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNW 676 WCNPPQ+HFDLS +F +IA+YKAG+VPV YRR+PCS+ GG++F G+ YF +VLI NVGGAGD++ V +KG++T W M +NWGQNW Sbjct: 140 WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQNW 228
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 5.392e-31 Identity = 55/95 (57.89%), Postives = 75/95 (78.95%), Query Frame = 2 Query: 401 AGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSN 685 +GGWCNPP+ HFD+++P + QI YKAGI+PV Y++V C R+GGIRFT+ G ++F LVL++NV G+G VR+VS+KG T W ++RNWG NWQ N Sbjct: 117 SGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGGFNFFELVLVSNVAGSGSVRSVSVKGGSTGWITLNRNWGANWQCN 211
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 7.042e-31 Identity = 54/91 (59.34%), Postives = 71/91 (78.02%), Query Frame = 2 Query: 404 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNW 676 G WCNPPQ+HFDLS P+F +IAQYKAG+VPV YRR+ C+R GG++F G+ YF ++L NVGGAGD++ + +KG +T W M +NWGQNW Sbjct: 141 GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNW 231
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 7.042e-31 Identity = 54/91 (59.34%), Postives = 71/91 (78.02%), Query Frame = 2 Query: 404 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNW 676 G WCNPPQ+HFDLS P+F +IAQYKAG+VPV YRR+ C+R GG++F G+ YF ++L NVGGAGD++ + +KG +T W M +NWGQNW Sbjct: 134 GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNW 224
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 9.197e-31 Identity = 56/91 (61.54%), Postives = 74/91 (81.32%), Query Frame = 2 Query: 410 WCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQS 682 WCNPPQ+HFDLSQP+F +IA+YKAG+VPV +RRVPC++ GG++F I G+ +F ++L NVGGAG VRA+ IKG+RT W M +NWGQ W + Sbjct: 178 WCNPPQKHFDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQIKGTRTQWIAMKKNWGQIWST 268
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 2.049e-30 Identity = 54/92 (58.70%), Postives = 73/92 (79.35%), Query Frame = 2 Query: 410 WCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSN 685 WCNPPQ+HFDLS +F +IA+YKAG+VPV YRR+PCS+ GG++F G+ YF +VLI NVGGAGD++ V +K ++T W M +NWGQNW ++ Sbjct: 146 WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKENKTGWITMKKNWGQNWTTS 237
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.734e-29 Identity = 54/93 (58.06%), Postives = 72/93 (77.42%), Query Frame = 2 Query: 404 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQS 682 GGWCNPP+ HFDL++P F +IA +KAGI+PVSYRRV C + GGIRF G+ Y+ LV + NVGG GD++ +++KGSRT W MS NWG ++Q+ Sbjct: 120 GGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWGASYQA 212
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.265e-29 Identity = 53/92 (57.61%), Postives = 70/92 (76.09%), Query Frame = 2 Query: 404 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQ 679 GGWCN + HFD+SQP +E I Y AGI+P+ Y++V C R GG+RFTING +YF LVL+TN+ G+G + ++S+KGS T W M+RNWG NWQ Sbjct: 112 GGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSVKGSCTGWIQMTRNWGANWQ 203
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 2.265e-29 Identity = 54/92 (58.70%), Postives = 69/92 (75.00%), Query Frame = 2 Query: 404 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQ 679 GGWCN + HFD+SQP +E I Y AGIVP+ Y++V C R GG+RFTI G +YF LVL+TN+ G+G + ++S+KGS T W MSRNWG NWQ Sbjct: 112 GGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGWIQMSRNWGANWQ 203
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.468e-28 Identity = 56/92 (60.87%), Postives = 69/92 (75.00%), Query Frame = 2 Query: 404 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQ 679 GGWCN P++HF++S+ F ++A+ KA IVPV +RRV C R GG+RFTI G + F VLITNV G+V AV +KGSRT W PM RNWGQNWQ Sbjct: 124 GGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITGGASFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQ 215 The following BLAST results are available for this feature:
BLAST of CN189366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189366 ID=CN189366; Name=CN189366; organism=Citrus sinensis; type=EST; length=685bpback to top |