CN189366
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 4.272e-28 Identity = 56/94 (59.57%), Postives = 68/94 (72.34%), Query Frame = 2 Query: 404 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSN 685 GG CNPP +HF L FE+IA +KAG +PV YRR+ C ++G +RFT++G F VLITNV G+GD+ AV IKGSRT W PM RNWGQNW N Sbjct: 129 GGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHIN 222
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.287e-28 Identity = 52/92 (56.52%), Postives = 69/92 (75.00%), Query Frame = 2 Query: 404 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQ 679 GGWCN + +FD+SQP +E I Y AGIVP+ Y++V C R GG+RF ING +YF LVL+TN+ G+G + ++S+KGS T W M+RNWG NWQ Sbjct: 103 GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQ 194
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 9.517e-28 Identity = 56/95 (58.95%), Postives = 68/95 (71.58%), Query Frame = 2 Query: 401 AGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSN 685 AGG CNPP HF L FE+IA +KAG++P+ YRRV C R GG+RF + G S+F VLI+NVGGAGDVR+V IKG+ + W M RNWGQ W N Sbjct: 120 AGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDGGVRFAVAGRSFFLTVLISNVGGAGDVRSVKIKGTESGWLSMGRNWGQIWHIN 214
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.057e-27 Identity = 54/95 (56.84%), Postives = 71/95 (74.74%), Query Frame = 2 Query: 407 GWCNPPQQHFDLSQPVFEQIAQY-KAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSR-TDWQPMSRNWGQNWQSN 685 GWCN P+ HFD+S P F +IA+ GIVPV YRRV C R+GG+RFT+ G FN+V+I+NVGG G VR+V+++GS+ W M+RNWG NWQS+ Sbjct: 114 GWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQSS 208
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 5.222e-26 Identity = 53/92 (57.61%), Postives = 67/92 (72.83%), Query Frame = 2 Query: 410 WCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSN 685 WC P +HFDLS P+F +IAQ KA +VPV YRRVPC++ GG++F + G+ +L NVGGAGD+ AVS KGS+T W MSR WGQNW +N Sbjct: 129 WCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVSAKGSKTAWVVMSRYWGQNWTTN 220
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.222e-26 Identity = 50/94 (53.19%), Postives = 69/94 (73.40%), Query Frame = 2 Query: 404 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSN 685 GGWCN P++H +LS F IA+ +A ++P+ YRRV C R+GG+RF+++G S+F VLI+NVG G+V V +KG T W PM+RNWGQNW S+ Sbjct: 120 GGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEVVGVKVKGHTTAWIPMARNWGQNWHSS 213
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.985e-25 Identity = 51/94 (54.26%), Postives = 68/94 (72.34%), Query Frame = 2 Query: 404 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIK-GSRTDWQPMSRNWGQNWQS 682 GGWCNPP+ HFDLS+P F ++A ++AGIVPV YRRVPC+R GG+RF + G+ Y+ L + NV GAGDV + +K G W MS NWG ++Q+ Sbjct: 128 GGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQA 221
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.680e-24 Identity = 50/94 (53.19%), Postives = 66/94 (70.21%), Query Frame = 2 Query: 404 GGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIK--GSRTDWQPMSRNWGQNWQ 679 GGWCNPP+ HFD++ P F ++AQ AGIVPV YRRVPC R GG+RF + G+ Y+ L+ + NVGGAGDV ++S+K G W + NWG +Q Sbjct: 143 GGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTGGVRFCLQGNHYWLLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWGITYQ 236
BLAST of CN189366 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.572e-22 Identity = 45/86 (52.33%), Postives = 66/86 (76.74%), Query Frame = 2 Query: 428 QHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGS-RTDWQPMSRNWGQNWQS 682 +HFDL+ P F IA+ K G+VPVSYR+V C R+GGI++TI G+ +N+V++ NVGGAGDV +++KG+ R W P+ R+WGQ W++ Sbjct: 162 EHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLTVKGTKRVKWTPLQRSWGQLWKT 247 The following BLAST results are available for this feature:
BLAST of CN189366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189366 ID=CN189366; Name=CN189366; organism=Citrus sinensis; type=EST; length=685bpback to top |