CN189365
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.064e-27 Identity = 56/77 (72.73%), Postives = 65/77 (84.42%), Query Frame = -3 Query: 400 LITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSGLQ 630 L+TNVGGAGDV AVS+KGSR+ WQ MS NWG NWQ+ + L+GQ LSF+VT SDG TV S+NVAP+GWSFGQTFSG Q Sbjct: 171 LVTNVGGAGDVTAVSVKGSRSGWQAMSHNWGANWQNGANLDGQPLSFRVTASDGRTVTSDNVAPSGWSFGQTFSGGQ 247
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.176e-26 Identity = 54/77 (70.13%), Postives = 65/77 (84.42%), Query Frame = -3 Query: 400 LITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSGLQ 630 L++NVGG G +++VSIKGSRT W MSRNWG NWQSN+YL+GQSLSFKVT+SDG T+ +VAPAGW+FGQTFS Q Sbjct: 182 LVSNVGGVGSIQSVSIKGSRTGWMAMSRNWGVNWQSNAYLDGQSLSFKVTSSDGQTLTFLDVAPAGWTFGQTFSTSQ 258
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.469e-26 Identity = 54/78 (69.23%), Postives = 64/78 (82.05%), Query Frame = -3 Query: 400 LITNVGGAGDVRAVSIKGSRTD-WQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSGLQ 630 L+TNVGGAGDV AV++K R+ WQ +SRNWGQNWQS + L+GQ+LSF+VTT DG +VVSNN P GWSFGQTFSG Q Sbjct: 212 LVTNVGGAGDVHAVAVKSERSAAWQALSRNWGQNWQSAALLDGQALSFRVTTGDGRSVVSNNAVPRGWSFGQTFSGAQ 289
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.698e-25 Identity = 52/83 (62.65%), Postives = 66/83 (79.52%), Query Frame = -3 Query: 400 LITNVGGAGDVRAVSIKGSRTD------WQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSGLQ 630 L+TNVGGAGDVR++++KGS + WQPMSRNWGQNWQSN+YL+G++LSF+VT DG ++ +VAPAGW FGQTF G Q Sbjct: 176 LVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRNWGQNWQSNAYLDGKALSFRVTAGDGRSLTCADVAPAGWQFGQTFEGRQ 258
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.897e-25 Identity = 53/75 (70.67%), Postives = 60/75 (80.00%), Query Frame = -3 Query: 406 LITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSG 630 L+TNV GAGD+ VS+KGS+TDW MSRNWGQNWQSN+ L GQSLSF+VT SD + S NVAPA W FGQTFSG Sbjct: 183 LVTNVAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQTFSG 257
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.783e-25 Identity = 51/75 (68.00%), Postives = 60/75 (80.00%), Query Frame = -3 Query: 406 LITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSG 630 L+TNV GAGDV VS+KGS T W +SRNWGQNWQSN+ L GQSLSF+V TSDG + SNN+AP+ W FGQT+SG Sbjct: 179 LVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNWQFGQTYSG 253
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.452e-24 Identity = 52/75 (69.33%), Postives = 57/75 (76.00%), Query Frame = -3 Query: 406 LITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSG 630 LITNV GAGD+ S+KG+ T W PMSRNWGQNWQSNS L GQ+LSF+VT SD T S N APAGW FGQTF G Sbjct: 185 LITNVAGAGDIVRASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGWHFGQTFEG 259
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.203e-24 Identity = 52/80 (65.00%), Postives = 64/80 (80.00%), Query Frame = -3 Query: 400 LITNVGGAGDVRAVSIK---GSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSGLQ 630 L++NVGGAGDV AV++K G + WQ M+RNWGQNWQS + L+GQ+LSF VTT D +VVS NVAPAGW+FGQTF+G Q Sbjct: 183 LVSNVGGAGDVHAVAVKAGGGRKARWQAMARNWGQNWQSGALLDGQALSFTVTTGDRRSVVSYNVAPAGWAFGQTFTGRQ 262
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.711e-23 Identity = 48/73 (65.75%), Postives = 59/73 (80.82%), Query Frame = -3 Query: 409 ITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFS 627 I NVGGAG +++VSIKGS+T W MSRNWG NWQSN+YL+GQ+LSF +TT+DG T V NV P+ WSFGQ +S Sbjct: 175 IQNVGGAGSIKSVSIKGSKTGWLAMSRNWGANWQSNAYLDGQALSFSITTTDGATRVFLNVVPSSWSFGQIYS 247
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.541e-23 Identity = 48/75 (64.00%), Postives = 58/75 (77.33%), Query Frame = -3 Query: 406 LITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSG 630 LITNV GAGD+ S+KGS+T W ++RNWGQNWQSN+ L GQSLSF+VT+SD T S N+AP+ W FGQTF G Sbjct: 181 LITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTFVG 255 The following BLAST results are available for this feature:
BLAST of CN189365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189365 ID=CN189365; Name=CN189365; organism=Citrus sinensis; type=EST; length=632bpback to top |