CN189365
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 3.541e-23 Identity = 49/77 (63.64%), Postives = 58/77 (75.32%), Query Frame = -3 Query: 400 LITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSGLQ 630 LITNV G+GD+ AV IKGSRT W PM RNWGQNW N+ L Q+LSF+VT+SD TV S NV+P W++GQTF G Q Sbjct: 186 LITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINADLRNQALSFEVTSSDRSTVTSYNVSPKNWNYGQTFEGKQ 262
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.757e-22 Identity = 47/75 (62.67%), Postives = 57/75 (76.00%), Query Frame = -3 Query: 406 LITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSG 630 L+TNV GAG++ + +KG+ T W MSRNWGQNWQSNS L GQSLSF+VT+SD + S N+APA W FGQTF G Sbjct: 178 LVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKFGQTFMG 252
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.757e-22 Identity = 47/78 (60.26%), Postives = 62/78 (79.49%), Query Frame = -3 Query: 400 LITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTF-SGLQ 630 LITNVGG G +++V IKG++T W MSRNWG NWQ+N+YLN Q++SF VT++ G T+V +VAP+ W FGQTF SG+Q Sbjct: 171 LITNVGGPGSIKSVQIKGTKTGWVTMSRNWGANWQANNYLNNQAISFSVTSTAGKTLVFEDVAPSNWQFGQTFTSGVQ 248
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.998e-22 Identity = 48/75 (64.00%), Postives = 56/75 (74.67%), Query Frame = -3 Query: 406 LITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSG 630 LITNV GAGD+ S+KGSRT W +SRNWGQNWQSN+ L GQ+LSF+VT SD T S N+ P+ W FGQTF G Sbjct: 178 LITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTFVG 252
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.488e-21 Identity = 46/73 (63.01%), Postives = 55/73 (75.34%), Query Frame = -3 Query: 409 ITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFS 627 + NVGG+G V VSIKGS+TDW MSRNWGQNWQSN+YLN QSLSFKV D V N+AP+ W+FG T++ Sbjct: 171 VFNVGGSGVVAQVSIKGSKTDWMAMSRNWGQNWQSNAYLNTQSLSFKVKLDDAREVTVWNIAPSNWNFGTTYT 243
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.383e-21 Identity = 45/74 (60.81%), Postives = 56/74 (75.68%), Query Frame = -3 Query: 409 LITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFS 630 L+TNVGG+G V + IKGS T W MSRNWG NWQSN+ L+GQ+LSF+V DG V + +VAPAGWSFG T++ Sbjct: 172 LVTNVGGSGAVAQMWIKGSGTGWMAMSRNWGANWQSNARLDGQALSFRVQADDGRVVTAADVAPAGWSFGATYT 245
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.259e-20 Identity = 47/77 (61.04%), Postives = 54/77 (70.13%), Query Frame = -3 Query: 400 LITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSGLQ 630 LITNV G+V AV +KGSRT W PM RNWGQNWQ ++ L GQ LSF+VT G TVV+ +VAP W F QTF G Q Sbjct: 181 LITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRGQPLSFEVTGGRGRTVVAYSVAPPDWMFAQTFEGKQ 257
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.645e-20 Identity = 43/73 (58.90%), Postives = 54/73 (73.97%), Query Frame = -3 Query: 412 LITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTF 630 L+TNV G+G V A +KGS T+W MSRNWG+NWQSN+YL GQ+LSF+V DG V + +VAPA W FG T+ Sbjct: 174 LVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALSFRVQADDGGVVTAYDVAPANWQFGSTY 246
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.645e-20 Identity = 46/73 (63.01%), Postives = 53/73 (72.60%), Query Frame = -3 Query: 409 ITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFS 627 +TNVGG+G V +SIKGS T W MSRNWG NWQSN+YL GQSLSF V DG V + NVAP+ W FG T+S Sbjct: 177 VTNVGGSGVVAQMSIKGSNTGWMAMSRNWGANWQSNAYLAGQSLSFIVQLDDGRKVTAWNVAPSNWFFGATYS 249
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.645e-20 Identity = 44/77 (57.14%), Postives = 58/77 (75.32%), Query Frame = -3 Query: 400 LITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSGLQ 630 LITNV G+G V+A+S+KGS+T W P++RNWG NWQ NS L GQ+LSF+VT++ G T+ N+V P W FG TF+ Q Sbjct: 175 LITNVAGSGSVQAMSVKGSKTGWIPLARNWGANWQCNSALVGQALSFRVTSTGGQTLQINSVVPEWWEFGTTFTSNQ 251 The following BLAST results are available for this feature:
BLAST of CN189365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189365 ID=CN189365; Name=CN189365; organism=Citrus sinensis; type=EST; length=632bpback to top |