CN189365
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.979e-18 Identity = 43/77 (55.84%), Postives = 52/77 (67.53%), Query Frame = -3 Query: 400 LITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFSGLQ 630 LI+NVG G+V V +KG T W PM+RNWGQNW S+ L GQSLSF+VT G T+ S +VAP W FG T+ G Q Sbjct: 177 LISNVGLDGEVVGVKVKGHTTAWIPMARNWGQNWHSSLDLIGQSLSFEVTLKGGKTIASYDVAPPYWRFGMTYQGKQ 253
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.303e-17 Identity = 42/75 (56.00%), Postives = 53/75 (70.67%), Query Frame = -3 Query: 409 LITNVGGAGDVRAVSIKGSR-TDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTFS 630 +I+NVGG G VR+V+++GS+ W M+RNWG NWQS+ L GQ LSFKVT +D T NV P+ W FGQTFS Sbjct: 171 MISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQSSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSWWFGQTFS 245
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.953e-17 Identity = 40/73 (54.79%), Postives = 58/73 (79.45%), Query Frame = -3 Query: 412 ITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTT-SDGHTVVSNNVAPAGWSFGQTF 627 + NVGGAGD++++++KGSRT+W MS NWG ++Q+ S L GQSLSF+VT+ + G T+ + NVAPA WS G+T+ Sbjct: 183 VMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAFSSLYGQSLSFRVTSYTTGETIYAWNVAPANWSGGKTY 255
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.151e-16 Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = -3 Query: 412 LITNVGGAGDVRAVSIKGS-RTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTF 630 +++NVGGAGDV +S+KG+ R W P+ RNWGQ WQ++ L G+SL+F+V T D S +V P W FG T+ Sbjct: 189 MVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQTSEVLTGESLTFRVMTGDHRKATSWHVLPPDWQFGVTY 262
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.349e-14 Identity = 36/73 (49.32%), Postives = 53/73 (72.60%), Query Frame = -3 Query: 412 ITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTT-SDGHTVVSNNVAPAGWSFGQTF 627 + NVGG GD++ +++KGSRT W MS NWG ++Q+ S L GQSLSF++T+ + T+ + N APA WS G+T+ Sbjct: 178 VMNVGGPGDIKTMAVKGSRTGWINMSHNWGASYQAFSSLYGQSLSFRLTSYTTRQTIYAYNAAPASWSAGKTY 250
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.301e-14 Identity = 39/73 (53.42%), Postives = 47/73 (64.38%), Query Frame = -3 Query: 406 NVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSF-GQTFSG 621 NVGGAG VRA+ IKG+RT W M +NWGQ W + L GQ LSF++TTSDG +V P W GQ+F G Sbjct: 236 NVGGAGAVRAMQIKGTRTQWIAMKKNWGQIWSTGVVLTGQCLSFRLTTSDGVMKEFIDVTPPDWKCNGQSFDG 308
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.339e-13 Identity = 32/74 (43.24%), Postives = 49/74 (66.22%), Query Frame = -3 Query: 412 LITNVGGAGDVRAVSIKGS-RTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNNVAPAGWSFGQTF 630 ++ NVGGAGDV +++KG+ R W P+ R+WGQ W++ + L G+SL+F+V T D S VAP W++ T+ Sbjct: 211 MVKNVGGAGDVVKLTVKGTKRVKWTPLQRSWGQLWKTEANLTGESLTFRVMTGDHRKATSWRVAPRDWTYDNTY 284
BLAST of CN189365 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.927e-11 Identity = 34/74 (45.95%), Postives = 48/74 (64.86%), Query Frame = -3 Query: 412 ITNVGGAGDVRAVSIK-GSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTT-SDGHTVVSNNVAPAGWSFGQTF 627 + NV GAGDV + +K G W MS NWG ++Q+ + L GQ+LSFKVT+ + G T+++ V PA W FG T+ Sbjct: 186 VMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQAFAQLGGQALSFKVTSYTTGQTILAAGVTPASWCFGLTY 259 The following BLAST results are available for this feature:
BLAST of CN189365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189365 ID=CN189365; Name=CN189365; organism=Citrus sinensis; type=EST; length=632bpback to top |