CN189362
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 3.133e-64 Identity = 111/176 (63.07%), Postives = 129/176 (73.30%), Query Frame = 1 Query: 106 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPM 627 GG W A ATFY YGNLYSQGYGTNTAALST+LFN+G SCG+C+EIKCVNDPKWC PG ++ VTATNFC GGWCNPP+ HFDL+ PVF IA+YRAG+VP++Y+RV C + GGIRFTINGH YFNLVLITNV GAGD+ S+KGS+TGW + Sbjct: 31 GGSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSL 206
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 2.653e-63 Identity = 112/179 (62.57%), Postives = 134/179 (74.86%), Query Frame = 1 Query: 103 GGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCV---NDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRT-GWQPM 627 GGGGW +A ATFY YGNLYSQGYGTNTAALSTALFNNGLSCG+C+E++C CLPG+++VTATNFC GGWCNPP+ HFD+SQPVFQ IA ++AG+VPV+Y+RV C ++GGIRFTINGHSYFNLVL+TNVGGAGDVHAV++K R+ WQ + Sbjct: 60 GGGGWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAGGGGSHSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALFKAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVKSERSAAWQAL 238
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 2.653e-63 Identity = 109/176 (61.93%), Postives = 130/176 (73.86%), Query Frame = 1 Query: 106 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPM 627 GG W NA ATFY YGNLYSQGYG NTAALSTALFNNG SCG+C+EIKC +DP+WC+PG +I+VTATNFC GGWCNPP++HFDL+ P+F I YRAG+VPV+Y+RVPC + GGIRFT+NG YFNLVL+TNV GAGD++ VS+KGS+T W M Sbjct: 33 GGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRM 208
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 4.525e-63 Identity = 111/181 (61.33%), Postives = 132/181 (72.93%), Query Frame = 1 Query: 97 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDP--KWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPM 627 A GGG W +A ATFY YGNLYSQGYG N AALSTALFN+G SCG+C+EIKCVN P +WC PG+ I++TATNFC GGWCNPP+ HFDL+ P+F HIA+YRAG+VPV+Y+RVPC ++GG+RFTING YFNLVLITNV GAGD+ S+KG+ TGW PM Sbjct: 30 AYGGGEWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTSTGWMPM 210
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 6.534e-62 Identity = 114/181 (62.98%), Postives = 134/181 (74.03%), Query Frame = 1 Query: 94 HANGG--GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPM 627 H GG G WINA ATFY YGNLYSQGYG TAALSTALF+ GLSCG+C+E+ CVNDP+WC+ G +I+VTATNFC GG C+PP HFDLSQP+++ IA Y++G++PV Y+RV C R GGIRFTINGHSYFNLVL+TNVGGAGDVH+VS+KGSRT WQ M Sbjct: 29 HHPGGHMGPWINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGRSIVVTATNFCPP--------GGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLM 201
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2) HSP 1 Score: 234.958 bits (598), Expect = 2.483e-61 Identity = 106/179 (59.22%), Postives = 133/179 (74.30%), Query Frame = 1 Query: 94 HANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTG-WQPM 627 +++ GGW ATFY YGNL+SQGYG TAALSTALFN+G CG+C+E++C +DP+WC+PG+I+V+ATNFC GGWCNPP +HFDL++P F IAQYRAG+VPVA++RVPC + GGIRFTING+ YF+LVLITNVGGAGD+ AVS+KGS+T WQ M Sbjct: 25 NSDDNGGWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKGSKTDQWQSM 203
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 233.802 bits (595), Expect = 5.531e-61 Identity = 105/176 (59.66%), Postives = 126/176 (71.59%), Query Frame = 1 Query: 106 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPM 627 GGGW A ATFY YGNLYSQGYG NTAALSTALFNNG SCG+C+E+KC +DPKWC G+ I +TATNFC GGWCNPP+ HFDL+ P+F IA+YRAG+VPV+++RVPC +RGGIRFTING YFNLVL+TNV GAG++ + +KG+ T W M Sbjct: 28 GGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTM 203
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 229.565 bits (584), Expect = 1.043e-59 Identity = 108/177 (61.02%), Postives = 125/177 (70.62%), Query Frame = 1 Query: 97 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPM 627 A G GW + ATFY YGNLYS GYGT+TAALSTALFNNG SCG+C+E++C CL GT+ VTATN C GGWCNPP+ HFD+++P F IAQ RAGVVPV Y+RV C ++GGIRFTI GHSYFNLVL+TNVGGAGDV AVS+KGSR+GWQ M Sbjct: 21 AGGDSGWSSGSATFYGGSDASGTMGGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRCGGGGS-CLAGTVAVTATNLCPPNYALAGDAGGWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYRRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDVTAVSVKGSRSGWQAM 196
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 4.383e-58 Identity = 106/184 (57.61%), Postives = 131/184 (71.20%), Query Frame = 1 Query: 103 GGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKW-CLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTG------WQPM 627 G G W ATFY YGNLYSQGYGT+TAALSTALFN GLSCGSCYE++C D + CLPG T+ VTATNFC GGWCNPP++HFDL++P F IA++ AG+VPV+++RV C R+GG+RFT+NGH+YFNLVL+TNVGGAGDV ++++KGS +G WQPM Sbjct: 24 GLGQWQPGHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNRGLSCGSCYELRCAGDHRRSCLPGGATVTVTATNFCPPNYALPSDGGGWCNPPRRHFDLAEPAFLRIARHAAGIVPVSFRRVACARKGGVRFTVNGHAYFNLVLVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPM 207
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 211.075 bits (536), Expect = 3.839e-54 Identity = 95/171 (55.56%), Postives = 118/171 (69.01%), Query Frame = 1 Query: 115 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPM 627 W +ARATFY YG+L+ QGYG TAALSTALFN G +CG+CY+I CV+DP+WCLPGTI +TATNFC G WCNPPQ+HFDLS P+F IAQY+AGVVPV Y+R+ C R GG++F G+ YF ++L NVGGAGD+ + +KG +TGW M Sbjct: 55 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVHDPQWCLPGTIKITATNFCPPDYSKTE--GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITM 223 The following BLAST results are available for this feature:
BLAST of CN189362 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189362 ID=CN189362; Name=CN189362; organism=Citrus sinensis; type=EST; length=627bpback to top |