CN189362
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 211.075 bits (536), Expect = 3.839e-54 Identity = 94/171 (54.97%), Postives = 118/171 (69.01%), Query Frame = 1 Query: 115 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPM 627 W +ARATFY YG+L+ QGYG TAALSTALFN G +CG+CY+I CVNDP+WCLPG++ +TATNFC G WCNPPQ+HFDLS P+F IAQY+AGVVPV Y+R+ C R GG++F G+ YF ++L NVGGAGD+ + +KG +TGW M Sbjct: 48 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNFCPPDYSKTE--GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITM 216
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.459e-53 Identity = 101/173 (58.38%), Postives = 116/173 (67.05%), Query Frame = 1 Query: 115 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPM 627 W A ATFY YG+LY GYGT TAALSTALFN G SCG+C+ I C +WC PGT I VTATNFC GGWCNPP++HFD+SQP ++ IA YRAG+VPV Y+RVPC R GGIRF +NGHSYF LVL+TNVGG+G V + IKGS TGW M Sbjct: 25 WTPAFATFYGGSDASGTMGGACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWCKPGTSITVTATNFCPPNYALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQMWIKGSGTGWMAM 197
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 209.149 bits (531), Expect = 1.459e-53 Identity = 94/171 (54.97%), Postives = 118/171 (69.01%), Query Frame = 1 Query: 115 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPM 627 W +ARATFY YGNL+ QGYG TAALSTALFN+G +CG+CYEI C DP+WCLPG++ +TATNFC WCNPPQ+HFDLS +F IA+Y+AGVVPV Y+R+PC + GG++F G+ YF +VLI NVGGAGD+ V +KG++TGW M Sbjct: 52 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITM 220
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 208.764 bits (530), Expect = 1.905e-53 Identity = 94/176 (53.41%), Postives = 120/176 (68.18%), Query Frame = 1 Query: 112 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRT-GWQPM 627 GW+ A ATFY YGNLY+QGYGT TAALSTALFN+GL+CG CY++ C D WC PG ++ +TATNFC GGWCNPP+ HFD++QP ++ I YR G++PV Y+RVPC ++GG+RFTINGH YF LVL+TNVG AG + A+ +KGS++ W M Sbjct: 33 GWVRAHATFYGGADASGTMGGACGYGNLYAQGYGTRTAALSTALFNDGLACGQCYKLVCDRKTDRTWCKPGVSVTITATNFCPPNWDLPSDSGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSIKAMDVKGSKSPDWMAM 208
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2) HSP 1 Score: 207.223 bits (526), Expect = 5.544e-53 Identity = 96/180 (53.33%), Postives = 119/180 (66.11%), Query Frame = 1 Query: 97 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPM 627 A GGW++ ATFY YGNLY+QGYG AALSTALFN G SCG CY I C P+WC GT + +TATN C GGWCNPP+ HFD+SQP ++ I YRAG+VPV Y++V C R+GG+RFT++G +YF LVLITNV G+G V A+S+KGS+TGW P+ Sbjct: 21 AAAAGGWVSGTATFYGGKDASGTMGGACGYGNLYTQGYGVYNAALSTALFNGGASCGQCYLIMCDASKTPEWCKAGTAVTITATNLCPPNWALANDDGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGSVQAMSVKGSKTGWIPL 200
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 206.068 bits (523), Expect = 1.235e-52 Identity = 93/171 (54.39%), Postives = 117/171 (68.42%), Query Frame = 1 Query: 115 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPM 627 W +ARATFY YGNL+ QGYG TAALSTALFN+G +CG+CYEI C DP+WCLPG++ +TATNFC WCNPPQ+HFDLS +F IA+Y+AGVVPV Y+R+PC + GG++F G+ YF +VLI NVGGAGD+ V +K ++TGW M Sbjct: 58 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKENKTGWITM 226
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.107e-52 Identity = 99/188 (52.66%), Postives = 125/188 (66.49%), Query Frame = 1 Query: 97 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVN----DPKWCLPG----TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIK---GSRTGWQPM 627 A G W +A ATFY YGN Y QGYGT+TAALS +F +GLSCG+C+E++C D + CLP +I+VTAT+ C GGWCNPP HFDLSQP F IA++++G+VPV+Y+RV C R+GG+RFTINGHSYFNLVL++NVGGAGDVHAV++K G + WQ M Sbjct: 24 AAAAGRWTDAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATDLCPANHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARWQAM 211
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 204.527 bits (519), Expect = 3.593e-52 Identity = 94/175 (53.71%), Postives = 115/175 (65.71%), Query Frame = 1 Query: 115 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTG-WQPM 627 W A ATFY YGNLYSQGYGT AALSTALFN+G SCG CY+I C P+WC PG T+ +TATNFC GGWCNPP+ HFD++QP ++ I Y AG++PV Y+RVPC ++GG+RFTINGH YF LVL+TNV AG + ++ + GS T W PM Sbjct: 39 WQKAHATFYGGADASGTMGGACGYGNLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGHDYFQLVLVTNVAAAGSIKSMEVMGSNTADWMPM 213
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 3.593e-52 Identity = 94/172 (54.65%), Postives = 119/172 (69.19%), Query Frame = 1 Query: 118 INARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPM 627 ++ ATFY YGNLYS GYGTNTAALS+ALFN+G +CG CY+I C ++ KWC GT + +TATN C GGWCNPP+QHFD++QP ++ I YR G+VPV ++RV C R+GG+RFTING+SYF LVLITNVGG G + +V IKG++TGW M Sbjct: 25 LSGTATFYGGSDASGTMGGACGYGNLYSTGYGTNTAALSSALFNDGAACGECYQITCDQSNSKWCKAGTSVTITATNLCPPDYSKPSNDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPGSIKSVQIKGTKTGWVTM 196
BLAST of CN189362 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 4.693e-52 Identity = 95/175 (54.29%), Postives = 116/175 (66.29%), Query Frame = 1 Query: 112 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPM 627 GW A ATFY YG+LYS GYGTNTAALST LFN+G SCG CY I C D ++C+ GT + +TATN C GGWCNPP+QHFD+++P + I Y G+VPV Y+RVPC ++GG+RFTING YF LVL++NVGG G + +VSIKGSRTGW M Sbjct: 33 GWNKAFATFYGGSDASGTMGGACGYGDLYSTGYGTNTAALSTVLFNDGASCGQCYRIMCDYQADRRFCISGTSVTITATNLCPPNYALPNDAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQSVSIKGSRTGWMAM 207 The following BLAST results are available for this feature:
BLAST of CN189362 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189362 ID=CN189362; Name=CN189362; organism=Citrus sinensis; type=EST; length=627bpback to top |