CN189358

Overview
NameCN189358
Unique NameCN189358
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length734
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN189358_ssr132 microsatellite CN189358_ssr132:132..147. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: SUL1_YEAST (Sulfate permease 1 OS=Saccharomyces cerevisiae GN=SUL1 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 8.785e-22
Identity = 54/145 (37.24%), Postives = 85/145 (58.62%), Query Frame = 2
Query:  308 KNKPASKKFILGLQYVFPIFEWAPRYSFQFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYNENPKLYLH---LAFTATFFAGVFQASLGLLRLGFIVDFL 733
            KN   +K     L  +FPI +W P Y+F +  ADL+AGIT+  + +PQ +SYA++A+L P  GLYSSF+   +Y++  +SKD+ +G VAV SL  A  + + +      +  +    +A T     G+    LG+LRLGF+V+ +
Sbjct:   91 KNNLTAKSAGSYLVSLFPIIKWFPHYNFTWGYADLVAGITVGCVLVPQSMSYAQIASLSPEYGLYSSFIGAFIYSLFATSKDVCIGPVAVMSLQTAKVIAEVLKKYPEDQTEVTAPIIATTLCLLCGIVATGLGILRLGFLVELI 235          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S26A6_HUMAN (Solute carrier family 26 member 6 OS=Homo sapiens GN=SLC26A6 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.785e-22
Identity = 53/147 (36.05%), Postives = 88/147 (59.86%), Query Frame = 2
Query:  323 SKKFILGLQYVFPIFEWAPRYSFQ-FLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFL---------GQEVNYNENPKLYLHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            ++ + L LQ++ P+  W PRY  + +L  DL++G+++A + +PQG++YA LA LPP+ GLYSSF P  +Y + G+S+ ++VGT AV S+++ S              +N        + +A T +   G+FQ  LGL+  GF+V +L
Sbjct:   65 ARAYALLLQHL-PVLVWLPRYPVRDWLLGDLLSGLSVAIMQLPQGLAYALLAGLPPVFGLYSSFYPVFIYFLFGTSRHISVGTFAVMSVMVGSVTESLAPQALNDSMINETARDAARVQVASTLSVLVGLFQVGLGLIHFGFVVTYL 210          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S2611_MOUSE (Sodium-independent sulfate anion transporter OS=Mus musculus GN=Slc26a11 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.957e-21
Identity = 49/125 (39.20%), Postives = 77/125 (61.60%), Query Frame = 2
Query:  359 PIFEWAPRYSFQFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYNENPKLYLHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            P+  W P YS Q+L+ D IAG+++    IPQ ++YA++A LPP  GLYS+F+   VY  +G+S+D+ +G  A+ SLL++ +  +E  Y          A    F +G  Q ++GLL LGF++DF+
Sbjct:   18 PVLAWVPDYSLQWLRLDFIAGLSVGLTVIPQALAYAEVAGLPPQYGLYSAFMGCFVYFFLGTSRDVTLGPTAIMSLLVSFYTFREPAY----------AVLLAFLSGCIQLAMGLLHLGFLLDFI 132          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: CYS14_NEUCR (Sulfate permease 2 OS=Neurospora crassa GN=cys-14 PE=2 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 4.820e-20
Identity = 51/131 (38.93%), Postives = 78/131 (59.54%), Query Frame = 2
Query:  344 LQYVFPIFEWAPRYSFQFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYNENPKLYL-HLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            L+ +FP   W   Y+  +L  D IAG+T+  + +PQG++YAKLANL P  GLY+SFV  ++Y    +SKD+ +G VAV S ++ + +       ++P      +A T  F +G     LGL+R GFIV+F+
Sbjct:   59 LRELFPFVNWIFHYNLTWLLGDFIAGVTVGFVVVPQGMAYAKLANLAPEYGLYTSFVGFVLYWAFATSKDITIGAVAVMSTIVGNIIANV--QKDHPDFDAGDIARTLAFISGAMLLFLGLIRFGFIVEFI 187          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S2611_BOVIN (Sodium-independent sulfate anion transporter OS=Bos taurus GN=SLC26A11 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.832e-19
Identity = 49/130 (37.69%), Postives = 73/130 (56.15%), Query Frame = 2
Query:  344 LQYVFPIFEWAPRYSFQFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYNENPKLYLHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            +Q   P   W P Y++  LK D IAGI++    IPQ ++YA++A LPP  GLYS+F+   VY  +G+S+D+ +G  A+ SLL++ +   E  Y          A    F  G  Q  +G LRLG ++DF+
Sbjct:   26 MQKWLPFLGWLPDYTWYALKMDFIAGISVGLTVIPQALAYAEVAGLPPQYGLYSAFMGCFVYFFLGTSRDVTLGPTAIMSLLVSFYTFHEPAY----------AVLLAFLTGCIQLGMGFLRLGLLLDFI 145          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S26A5_HUMAN (Prestin OS=Homo sapiens GN=SLC26A5 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.187e-18
Identity = 52/151 (34.44%), Postives = 84/151 (55.63%), Query Frame = 2
Query:  329 KFILGLQYVF-PIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEV--------------NYNENPKLYLHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            K I  + Y+F PI +W P Y F +++  DL++GI+   L +PQG+++A LA +PPI GLYSSF P ++Y  +G+S+ +++G  AV SL+I     + V                     L + +A + T  +G+ Q  LG+ R GF+  +L
Sbjct:   55 KKIRNIIYMFLPITKWLPAYKFKEYVLGDLVSGISTGVLQLPQGLAFAMLAAVPPIFGLYSSFYPVIMYCFLGTSRHISIGPFAVISLMIGGVAVRLVPDDIVIPGGVNATNGTEARDALRVKVAMSVTLLSGIIQFCLGVCRFGFVAIYL 205          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S26A5_MOUSE (Prestin OS=Mus musculus GN=Slc26a5 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.645e-18
Identity = 51/151 (33.77%), Postives = 83/151 (54.97%), Query Frame = 2
Query:  329 KFILGLQYVF-PIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEV--------------NYNENPKLYLHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            K I  + Y+F PI +W P Y F +++  DL++GI+   L +PQG+++A LA +PP+ GLYSSF P ++Y   G+S+ +++G  AV SL+I     + V                     L + +A + T  +G+ Q  LG+ R GF+  +L
Sbjct:   55 KKIRNIIYMFLPITKWLPAYKFKEYVLGDLVSGISTGVLQLPQGLAFAMLAAVPPVFGLYSSFYPVIMYCFFGTSRHISIGPFAVISLMIGGVAVRLVPDDIVIPGGVNATNGTEARDALRVKVAMSVTLLSGIIQFCLGVCRFGFVAIYL 205          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S26A5_MERUN (Prestin OS=Meriones unguiculatus GN=SLC26A5 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.645e-18
Identity = 51/151 (33.77%), Postives = 83/151 (54.97%), Query Frame = 2
Query:  329 KFILGLQYVF-PIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEV--------------NYNENPKLYLHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            K I  + Y+F PI +W P Y F +++  DL++GI+   L +PQG+++A LA +PP+ GLYSSF P ++Y   G+S+ +++G  AV SL+I     + V                     L + +A + T  +G+ Q  LG+ R GF+  +L
Sbjct:   55 KKIRNIIYMFLPITKWLPAYKFKEYVLGDLVSGISTGVLQLPQGLAFAMLAAVPPVFGLYSSFYPVIMYCFFGTSRHISIGPFAVISLMIGGVAVRLVPDDIVIPGGVNATNGTEARDALRVKVAMSVTLLSGIIQFCLGVCRFGFVAIYL 205          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S26A5_RAT (Prestin OS=Rattus norvegicus GN=Slc26a5 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.455e-18
Identity = 50/151 (33.11%), Postives = 83/151 (54.97%), Query Frame = 2
Query:  329 KFILGLQYVF-PIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEV--------------NYNENPKLYLHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            K +  + Y+F PI +W P Y F +++  DL++GI+   L +PQG+++A LA +PP+ GLYSSF P ++Y   G+S+ +++G  AV SL+I     + V                     L + +A + T  +G+ Q  LG+ R GF+  +L
Sbjct:   55 KKVRNIIYMFLPITKWLPAYKFKEYVLGDLVSGISTGVLQLPQGLAFAMLAAVPPVFGLYSSFYPVIMYCFFGTSRHISIGPFAVISLMIGGVAVRLVPDDIVIPGGVNATNGTEARDALRVKVAMSVTLLSGIIQFCLGVCRFGFVAIYL 205          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: SULX_YEAST (Putative sulfate transporter YPR003C OS=Saccharomyces cerevisiae GN=YPR003C PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.005e-17
Identity = 54/172 (31.40%), Postives = 83/172 (48.26%), Query Frame = 2
Query:  224 IPPPQPFFNSLKYNLKETFFPDDPLRLFKNKPASKKFILG-LQYVFPIFEWAPRYSFQFLKADLIAGITIASLAIPQGISY-AKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYNENPKLYLHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            +PPP    +    N   T    +      N    +  +   L Y  P F W P Y+F  L  D+IAGI++AS  IP  +SY   +A++PP+ GLYS  + P VY I+GS   + VG  +  SL++   +     + EN  L + ++   TF +G      G+ R GF+ + L
Sbjct:   60 VPPPNNSRSGCTNNTNNTNNTSNTSNTNNNDSVDENTVFETLPYYLPCFSWLPEYTFNKLWGDVIAGISVASFQIPLALSYTTSIAHVPPLCGLYSLAISPFVYGILGSVPQMIVGPESAISLVVGQAVESITLHKENVSL-IDISTVITFVSGTILLFSGISRFGFLGNVL 230          
The following BLAST results are available for this feature:
BLAST of CN189358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
SUL1_YEAST8.785e-2237.24Sulfate permease 1 OS=Saccharomyces cerevisiae GN=... [more]
S26A6_HUMAN8.785e-2236.05Solute carrier family 26 member 6 OS=Homo sapiens ... [more]
S2611_MOUSE1.957e-2139.20Sodium-independent sulfate anion transporter OS=Mu... [more]
CYS14_NEUCR4.820e-2038.93Sulfate permease 2 OS=Neurospora crassa GN=cys-14 ... [more]
S2611_BOVIN1.832e-1937.69Sodium-independent sulfate anion transporter OS=Bo... [more]
S26A5_HUMAN1.187e-1834.44Prestin OS=Homo sapiens GN=SLC26A5 PE=2 SV=1[more]
S26A5_MOUSE2.645e-1833.77Prestin OS=Mus musculus GN=Slc26a5 PE=2 SV=2[more]
S26A5_MERUN2.645e-1833.77Prestin OS=Meriones unguiculatus GN=SLC26A5 PE=1 S... [more]
S26A5_RAT3.455e-1833.11Prestin OS=Rattus norvegicus GN=Slc26a5 PE=1 SV=1[more]
SULX_YEAST1.005e-1731.40Putative sulfate transporter YPR003C OS=Saccharomy... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001L17_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001L17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189358 ID=CN189358; Name=CN189358; organism=Citrus sinensis; type=EST; length=734bp
GCAGGCACCTCCGAATTCAGCGTAGCCACTCCTATAACACTGCGCATATC
TTTTGCATTTAGCTCAACCCAAATACGTTCTCCGATATAAAACGCAGCCG
CTGCATTTTATTCTCTCTATCTTGCATTTAGTTAATTAATTAATTAACTA
CATGGATAAGGGTAACGCAGACTACGTGTATCCATCGTCTAAAGAAAATG
TGGAGAATGCACATCGTGTTGCGATTCCCCCACCGCAGCCATTTTTCAAT
TCACTAAAGTATAATCTTAAAGAGACGTTCTTCCCTGATGATCCGCTCAG
GCTATTCAAGAACAAGCCGGCATCTAAGAAGTTCATATTAGGCCTTCAGT
ATGTGTTTCCCATTTTTGAATGGGCTCCGCGTTACAGCTTTCAGTTCTTG
AAAGCTGACCTTATTGCTGGGATCACCATTGCAAGTCTCGCAATTCCTCA
GGGGATTAGTTATGCGAAGCTGGCGAACTTGCCCCCAATTCTTGGCCTAT
ATTCAAGCTTTGTTCCGCCATTGGTTTATGCTATCATGGGGAGCTCCAAA
GATTTGGCAGTTGGAACGGTGGCTGTCGCCTCACTTCTCATAGCTTCATT
CTTGGGGCAAGAAGTTAATTATAATGAGAACCCTAAGCTATATCTTCATC
TTGCTTTCACTGCAACATTTTTTGCTGGTGTTTTTCAAGCTTCCTTGGGA
CTGCTAAGGCTAGGGTTTATCGTGGACTTTTTAT
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