CN189358

Overview
NameCN189358
Unique NameCN189358
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length734
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S26A3_HUMAN (Chloride anion exchanger OS=Homo sapiens GN=SLC26A3 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.714e-17
Identity = 48/159 (30.19%), Postives = 91/159 (57.23%), Query Frame = 2
Query:  323 SKKFILGLQYVFPIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLI----------------ASFLGQEVNYN-----ENPKLYLHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            +K+ +L L   FPI  W P Y   ++L +D+++GI+   +A+ QG+++A L ++PP+ GLY+SF P ++Y   G+S+ ++VG   + S+++                A+ LG   N N     ++ ++ +  A + T  +G+ Q + G+LR+GF+V +L
Sbjct:   50 AKRIVLSL---FPIASWLPAYRLKEWLLSDIVSGISTGIVAVLQGLAFALLVDIPPVYGLYASFFPAIIYLFFGTSRHISVGPFPILSMMVGLAVSGAVSKAVPDRNATTLGLPNNSNNSSLLDDERVRVAAAASVTVLSGIIQLAFGILRIGFVVIYL 205          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S26A9_XENTR (Solute carrier family 26 member 9 OS=Xenopus tropicalis GN=slc26a9 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.233e-16
Identity = 50/152 (32.89%), Postives = 76/152 (50.00%), Query Frame = 2
Query:  326 KKFILGLQYVFPIFEWAPRYSFQF-LKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFL---------------GQEVNYNENPKLYLHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            K FI  L   FPI  W P+Y+ +  L  D + GI+  ++ IPQG+++A LANLPP+ GLYSSF P +VY  MG    +  GT AV S+++ +                 G   N        +H++ T      + Q +L  ++ GF+  +L
Sbjct:   49 KNFIFRL---FPILSWLPKYNIKGNLLNDALGGISAGTIQIPQGMAFALLANLPPVNGLYSSFFPLVVYFFMGGIPQMVPGTFAVISIIVGNVCLKLAPESHFQNVTSNGTITNIEAMNTARMHISATLACLTAIIQIALSFVQFGFVAIYL 197          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S26A9_MOUSE (Solute carrier family 26 member 9 OS=Mus musculus GN=Slc26a9 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.515e-16
Identity = 49/154 (31.82%), Postives = 79/154 (51.30%), Query Frame = 2
Query:  326 KKFILGLQYVFPIFEWAPRYSFQ-FLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQ-------EVNYNENPKLY----------LHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            K F+ GL    P+  W P+Y  + ++  DL+ G++   + +PQG+++A LANLP + GLYSSF P L Y  +G    +  GT AV S+L+ +   Q       ++  N   + Y          LH++ T      V Q +LG ++ GF+  +L
Sbjct:   49 KAFVFGL---LPVLSWLPKYKIKDYIIPDLLGGLSGGCIQVPQGMAFALLANLPAVNGLYSSFFPLLTYFFLGGIHQMVPGTFAVISILVGNICLQLAPESKFQIFNNVTNETYVDTAAMEAERLHVSATLACLTAVIQMALGFMQFGFVAIYL 199          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S26A3_MOUSE (Chloride anion exchanger OS=Mus musculus GN=Slc26a3 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.515e-16
Identity = 48/152 (31.58%), Postives = 86/152 (56.58%), Query Frame = 2
Query:  323 SKKFILGLQYVFPIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEV-----------NYNENPKLY---LHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            +KK  L L   FPI  W P Y   ++L +D+++GI+   +A+ QG+++A L N+PP  GLY++F P + Y  +G+S+ ++VG   V S+++   + + V           +  EN       + +A + T  +G+ Q  LG+L++GF+V +L
Sbjct:   50 AKKIALSL---FPIASWLPAYKIKEWLLSDIVSGISTGLVAVLQGLAFALLVNIPPAYGLYAAFFPVITYFFLGTSRHISVGPFPVLSMMVGVVVTRVVSDPNASSELSSSSTENDSFIEEKVMVAASVTVLSGIIQLLLGVLQVGFVVIYL 198          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S26A3_RAT (Chloride anion exchanger OS=Rattus norvegicus GN=Slc26a3 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.203e-16
Identity = 47/152 (30.92%), Postives = 88/152 (57.89%), Query Frame = 2
Query:  323 SKKFILGLQYVFPIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYNE-NPKL-------------YLHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            +KK  L L   FPI  W P Y   ++L +D+++GI+   +A+ QG+++A L N+PP  GLY++F P + Y  +G+S+ ++VG   V S+++   + +  + ++ +P L              + +A + T  +G+ Q  LG+L++GF+V +L
Sbjct:   50 AKKIALSL---FPIASWLPAYKIKEWLLSDIVSGISTGLVAVLQGLAFALLVNIPPAYGLYAAFFPVITYFFLGTSRHISVGPFPVLSMMVGVVVTRVASGSDTSPALSSSSAENDSMIEEKVMVAASVTVLSGIIQLLLGVLQIGFVVIYL 198          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S26A9_HUMAN (Solute carrier family 26 member 9 OS=Homo sapiens GN=SLC26A9 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.229e-15
Identity = 49/154 (31.82%), Postives = 78/154 (50.65%), Query Frame = 2
Query:  326 KKFILGLQYVFPIFEWAPRYSFQ-FLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQ-------EVNYNENPKLY----------LHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            K  + GL    P+  W P+Y  + ++  DL+ G++  S+ +PQG+++A LANLP + GLYSSF P L Y  +G    +  GT AV S+L+ +   Q       +V  N   + Y          LH++ T      + Q  LG ++ GF+  +L
Sbjct:   49 KAVVFGL---LPVLSWLPKYKIKDYIIPDLLGGLSGGSIQVPQGMAFALLANLPAVNGLYSSFFPLLTYFFLGGVHQMVPGTFAVISILVGNICLQLAPESKFQVFNNATNESYVDTAAMEAERLHVSATLACLTAIIQMGLGFMQFGFVAIYL 199          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S26A1_RAT (Sulfate anion transporter 1 OS=Rattus norvegicus GN=Slc26a1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.737e-15
Identity = 54/201 (26.87%), Postives = 95/201 (47.26%), Query Frame = 2
Query:  227 PPPQPFFNSLKYNLKETFFPDDPLRLFKNKPASKKFILGLQYVFPIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNY-------------NENPKL------------------YLHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            P  Q    +LK  LK++           + P ++  + GL   FP+  W P+Y   ++L  D+++G+ I  + +PQ I+Y+ LA L PI  LY+SF   L+Y +MG+S+ + VG  ++  L++   + +E+               N +  L                   + +A   T  AG++Q  +G+LRLGF+  +L
Sbjct:   22 PVSQGLLETLKARLKKS--------CTCSMPCAQALVQGL---FPVIRWLPQYRLKEYLAGDVMSGLVIGIILVPQAIAYSLLAGLQPIYSLYTSFFANLIYFLMGTSRHVNVGIFSLLCLMVGQVVDRELQLAGFDPSQDSLGPGNNDSTLNNTATLTVGLQDCGRDCHAIRIATALTLMAGLYQVLMGILRLGFVSTYL 211          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S26A1_MOUSE (Sulfate anion transporter 1 OS=Mus musculus GN=Slc26a1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.358e-14
Identity = 54/202 (26.73%), Postives = 94/202 (46.53%), Query Frame = 2
Query:  227 PPPQPFFNSLKYNLKETFFPDDPLRLFKNKPASKKFILGLQYVFPIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNY-------------NENPKLY-------------------LHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            P  Q    +LK  LK++           + P ++  + GL   FP   W P+Y   ++L  D+++G+ I  + +PQ I+Y+ LA L PI  LY+SF   L+Y +MG+S+ + VG  ++  L++   + +E+               N +  L                    + +A   T  AG++Q  +G+LRLGF+  +L
Sbjct:   22 PVSQGLLETLKARLKKS--------CTCSMPCAQALVQGL---FPAIHWLPQYRLKEYLAGDVMSGLVIGIILVPQAIAYSLLAGLQPIYSLYTSFFANLIYFLMGTSRHVNVGIFSLLCLMVGQVVDRELQLAGFDPSQDSLGPKNNDSTLNNSATTLIIGLQDCRRDCYAIRVATALTLMAGLYQVLMGILRLGFVSTYL 212          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S26A2_SHEEP (Sulfate transporter OS=Ovis aries GN=SLC26A2 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.774e-14
Identity = 44/149 (29.53%), Postives = 77/149 (51.68%), Query Frame = 2
Query:  359 PIFEWAPRYSFQF-LKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQE------------------VNYNENPKL-----YLHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            P+ +W P+Y  +  +  D+++G+ +  L +PQ I+Y+ LA   PI GLY+SF   L+Y I+G+S+ ++VG   +  L+I   + +E                  VN   N         + +  T TF AGV+Q ++G  ++GF+  +L
Sbjct:   95 PVLQWLPKYDLKKNILGDMMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASLIYFILGTSRHISVGIFGILCLMIGEVVDRELYIAGYDTVHAASNESSLVNQMSNQTCDRSCYAITVGSTVTFVAGVYQVAMGFFQVGFVSVYL 243          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S26A2_HUMAN (Sulfate transporter OS=Homo sapiens GN=SLC26A2 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.774e-14
Identity = 46/167 (27.54%), Postives = 84/167 (50.30%), Query Frame = 2
Query:  323 SKKFILGLQYVFPIFEWAPRYSFQF-LKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEV------NYNENPKL-----------------------YLHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            +K  ILG     P+ +W P+Y  +  +  D+++G+ +  L +PQ I+Y+ LA   P+ GLY+SF   ++Y ++G+S+ ++VG   V  L+I   + +E+      N +  P L                        + +  T TF AGV+Q ++G  ++GF+  +L
Sbjct:   85 AKNMILGF---LPVLQWLPKYDLKKNILGDVMSGLIVGILLVPQSIAYSLLAGQEPVYGLYTSFFASIIYFLLGTSRHISVGIFGVLCLMIGETVDRELQKAGYDNAHSAPSLGMVSNGSTLLNHTSDRICDKSCYAIMVGSTVTFIAGVYQVAMGFFQVGFVSVYL 248          
The following BLAST results are available for this feature:
BLAST of CN189358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
S26A3_HUMAN1.714e-1730.19Chloride anion exchanger OS=Homo sapiens GN=SLC26A... [more]
S26A9_XENTR3.233e-1632.89Solute carrier family 26 member 9 OS=Xenopus tropi... [more]
S26A9_MOUSE5.515e-1631.82Solute carrier family 26 member 9 OS=Mus musculus ... [more]
S26A3_MOUSE5.515e-1631.58Chloride anion exchanger OS=Mus musculus GN=Slc26a... [more]
S26A3_RAT7.203e-1630.92Chloride anion exchanger OS=Rattus norvegicus GN=S... [more]
S26A9_HUMAN1.229e-1531.82Solute carrier family 26 member 9 OS=Homo sapiens ... [more]
S26A1_RAT2.737e-1526.87Sulfate anion transporter 1 OS=Rattus norvegicus G... [more]
S26A1_MOUSE1.358e-1426.73Sulfate anion transporter 1 OS=Mus musculus GN=Slc... [more]
S26A2_SHEEP1.774e-1429.53Sulfate transporter OS=Ovis aries GN=SLC26A2 PE=3 ... [more]
S26A2_HUMAN1.774e-1427.54Sulfate transporter OS=Homo sapiens GN=SLC26A2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001L17_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001L17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189358 ID=CN189358; Name=CN189358; organism=Citrus sinensis; type=EST; length=734bp
GCAGGCACCTCCGAATTCAGCGTAGCCACTCCTATAACACTGCGCATATC
TTTTGCATTTAGCTCAACCCAAATACGTTCTCCGATATAAAACGCAGCCG
CTGCATTTTATTCTCTCTATCTTGCATTTAGTTAATTAATTAATTAACTA
CATGGATAAGGGTAACGCAGACTACGTGTATCCATCGTCTAAAGAAAATG
TGGAGAATGCACATCGTGTTGCGATTCCCCCACCGCAGCCATTTTTCAAT
TCACTAAAGTATAATCTTAAAGAGACGTTCTTCCCTGATGATCCGCTCAG
GCTATTCAAGAACAAGCCGGCATCTAAGAAGTTCATATTAGGCCTTCAGT
ATGTGTTTCCCATTTTTGAATGGGCTCCGCGTTACAGCTTTCAGTTCTTG
AAAGCTGACCTTATTGCTGGGATCACCATTGCAAGTCTCGCAATTCCTCA
GGGGATTAGTTATGCGAAGCTGGCGAACTTGCCCCCAATTCTTGGCCTAT
ATTCAAGCTTTGTTCCGCCATTGGTTTATGCTATCATGGGGAGCTCCAAA
GATTTGGCAGTTGGAACGGTGGCTGTCGCCTCACTTCTCATAGCTTCATT
CTTGGGGCAAGAAGTTAATTATAATGAGAACCCTAAGCTATATCTTCATC
TTGCTTTCACTGCAACATTTTTTGCTGGTGTTTTTCAAGCTTCCTTGGGA
CTGCTAAGGCTAGGGTTTATCGTGGACTTTTTAT
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