CN189358

Overview
NameCN189358
Unique NameCN189358
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length734
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S2610_MOUSE (Solute carrier family 26 member 10 OS=Mus musculus GN=Slc26a10 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.774e-14
Identity = 44/137 (32.12%), Postives = 77/137 (56.20%), Query Frame = 2
Query:  359 PIFEWAPRYSFQ-FLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASF--------LGQEVNYNENPKL---YLHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            P   W P+Y ++ +L  D +AG+T+  + +PQG+++A L ++PP+ GLY+SF P L+Y+++G+ + L+ GT AV SL+  S         L   ++  E  +L    +  A    F +G     + +L+LG +  FL
Sbjct:   83 PPLRWLPQYRWRAWLLGDAVAGVTVGVVHVPQGMAFALLTSVPPVFGLYTSFFPVLIYSLLGTGRHLSTGTFAVLSLMTGSVVERVVPEPLAGNLSGIEREQLEARRVGAAAAVAFGSGALMLGMFVLQLGVLSTFL 219          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S26A2_BUBBU (Sulfate transporter OS=Bubalus bubalis GN=SLC26A2 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.952e-14
Identity = 43/149 (28.86%), Postives = 78/149 (52.35%), Query Frame = 2
Query:  359 PIFEWAPRYSFQF-LKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNY----------------NENPK-------LYLHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            P+ +W P+Y  +  +  D+++G+ +  L +PQ I+Y+ LA   PI GLY+SF   L+Y I+G+S+ ++VG   +  L+I   + +E+                  N+ P          + +  T TF AGV+Q ++G  ++GF+  +L
Sbjct:   95 PVLQWLPKYDLKKNILGDVMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASLIYFILGTSRHISVGIFGILCLMIGEVVDRELYIAGYDAVHAASNESSLVNQMPDKTCDRSCYAIIVGSTVTFVAGVYQVAMGFFQVGFVSVYL 243          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S26A2_BOVIN (Sulfate transporter OS=Bos taurus GN=SLC26A2 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.162e-14
Identity = 43/149 (28.86%), Postives = 79/149 (53.02%), Query Frame = 2
Query:  359 PIFEWAPRYSFQF-LKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNY----------NENPKLY-------------LHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            P+ +W P+Y  +  +  D+++G+ +  L +PQ I+Y+ LA   PI GLY+SF   L+Y I+G+S+ ++VG   +  L+I   + +E+            NE+  +              + +  T TF AGV+Q ++G  ++GF+  +L
Sbjct:   95 PVLQWLPKYDLKKNILGDVMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASLIYFILGTSRHISVGIFGILCLMIGEVVDRELYIAGYDTVHAASNESSLVNQISDKTCDRSCYAIIVGSTVTFVAGVYQVAMGFFQVGFVSVYL 243          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S26A4_RAT (Pendrin OS=Rattus norvegicus GN=Slc26a4 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.742e-14
Identity = 52/166 (31.33%), Postives = 85/166 (51.20%), Query Frame = 2
Query:  302 LFKNKPASKKFILG-LQYVFPIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFL---------------GQEVN-----YNENPKLYLHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            L ++   S+K   G L+ + PI +W P+Y   ++L +D+I+G++   +   QG++YA LA +P   GLYS+F P L Y + G+S+ ++VG   V SL++ S +               G  +N             + LA T T   G+ Q   G L++GFIV +L
Sbjct:   50 LARSCSCSRKRAFGALKALLPILDWLPKYRVKEWLLSDIISGVSTGLVGTLQGMAYALLAAVPVQYGLYSAFFPILTYFVFGTSRHISVGPFPVVSLMVGSVVLSMAPDDHFLVPSGNGSTLNTTTLDTGTRDAARVLLASTLTLLVGIIQLVFGGLQIGFIVRYL 215          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S26A2_RAT (Sulfate transporter OS=Rattus norvegicus GN=Slc26a2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.805e-14
Identity = 42/156 (26.92%), Postives = 77/156 (49.36%), Query Frame = 2
Query:  356 FPIFEWAPRYSFQF-LKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQE------------------------VNYN-----ENPKLYLHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            FP+  W P+Y  +  +  D+++G+ +  L +PQ I+Y+ LA   PI GLY+SF   ++Y + G+S+ ++VG   +  L+I   + +E                        VN+      +     + +  T TF AGV+Q ++G  ++GF+  +L
Sbjct:   93 FPVLRWLPKYDLKKNILGDMMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASIIYFLFGTSRHISVGIFGILCLMIGEVVDRELHKACPDIDTTSSSIAMFSNGCVVVNHTLDGLCDKSCYAIKIGSTVTFMAGVYQVAMGFFQVGFVSVYL 248          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S26A7_HUMAN (Anion exchange transporter OS=Homo sapiens GN=SLC26A7 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.150e-13
Identity = 44/136 (32.35%), Postives = 74/136 (54.41%), Query Frame = 2
Query:  359 PIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYN-------ENPKLY---------LHLAFTATFFAGVFQASLGLLRLG 715
            PI +WAP Y+  + L  D ++GI +A   + QG+++A L+++ P+ GLY S  P ++YAI G    +A GT A+ SL+ A+ + + V  N        N  +          +H+A   +F  GV Q ++ +L+LG
Sbjct:   33 PILDWAPHYNLKENLLPDTVSGIMLAVQQVTQGLAFAVLSSVHPVFGLYGSLFPAIIYAIFGMGHHVATGTFALTSLISANAVERIVPQNMQNLTTQSNTSVLGLSDFEMQRIHVAAAVSFLGGVIQVAMFVLQLG 168          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S26A4_MOUSE (Pendrin OS=Mus musculus GN=Slc26a4 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.150e-13
Identity = 51/166 (30.72%), Postives = 85/166 (51.20%), Query Frame = 2
Query:  302 LFKNKPASKKFILGL-QYVFPIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFL---------------GQEVN-----YNENPKLYLHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            L ++   S+K   G+ + + PI +W P+Y   ++L +D+I+G++   +   QG++YA LA +P   GLYS+F P L Y + G+S+ ++VG   V SL++ S +               G  +N             + LA T T   G+ Q   G L++GFIV +L
Sbjct:   50 LARSCSCSRKRAFGVVKTLLPILDWLPKYRVKEWLLSDIISGVSTGLVGTLQGMAYALLAAVPVQFGLYSAFFPILTYFVFGTSRHISVGPFPVVSLMVGSVVLSMAPDDHFLVPSGNGSALNSTTLDTGTRDAARVLLASTLTLLVGIIQLVFGGLQIGFIVRYL 215          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S26A2_MOUSE (Sulfate transporter OS=Mus musculus GN=Slc26a2 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.150e-13
Identity = 42/156 (26.92%), Postives = 77/156 (49.36%), Query Frame = 2
Query:  356 FPIFEWAPRYSFQF-LKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQE------------------------VNYN-----ENPKLYLHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            FP+  W P+Y  +  +  D+++G+ +  L +PQ I+Y+ LA   PI GLY+SF   ++Y + G+S+ ++VG   +  L+I   + +E                        VN+      +     + +  T TF AGV+Q ++G  ++GF+  +L
Sbjct:   93 FPVLRWLPKYDLKKNILGDVMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASIIYFLFGTSRHISVGIFGILCLMIGEVVDRELHKACPDTDATSSSIAVFSSGCVVVNHTLDGLCDKSCYAIKIGSTVTFMAGVYQVAMGFFQVGFVSVYL 248          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S26A2_HORSE (Sulfate transporter OS=Equus caballus GN=SLC26A2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.502e-13
Identity = 45/167 (26.95%), Postives = 82/167 (49.10%), Query Frame = 2
Query:  323 SKKFILGLQYVFPIFEWAPRYSFQF-LKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEV------NYNENPKL-----------------------YLHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            +K  I G     P+ +W P+Y  +  +  D+++G+ +  L +PQ I+Y+ LA   PI GLY+SF   L+Y ++G+S+ ++VG   V  L+I   + +E+        +  P L                        + +  T TF AG++Q ++G  ++GF+  +L
Sbjct:   87 AKNMIFGF---LPVLQWLPKYDLKKNILGDVMSGLIVGILLVPQSIAYSLLAGQEPIYGLYTSFFASLIYFLLGTSRHISVGIFGVLCLMIGEVVDRELLKAGYDTVHIAPSLGMVSNGSTSLNQTSDRICDRSCYAIKVGSTVTFLAGIYQVAMGFFQVGFVSVYL 250          
BLAST of CN189358 vs. ExPASy Swiss-Prot
Match: S26A4_HUMAN (Pendrin OS=Homo sapiens GN=SLC26A4 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.562e-13
Identity = 53/159 (33.33%), Postives = 81/159 (50.94%), Query Frame = 2
Query:  323 SKKFILG-LQYVFPIFEWAPRYSF-QFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIAS----------FLGQEVNYN----------ENPKLYLHLAFTATFFAGVFQASLGLLRLGFIVDFL 733
            S+K   G L+ + PI EW P+Y   ++L +D+I+G++   +A  QG++YA LA +P   GLYS+F P L Y I G+S+ ++VG   V SL++ S          FL    N                  + +A   T   G+ Q   G L++GFIV +L
Sbjct:   57 SRKRAFGVLKTLVPILEWLPKYRVKEWLLSDVISGVSTGLVATLQGMAYALLAAVPVGYGLYSAFFPILTYFIFGTSRHISVGPFPVVSLMVGSVVLSMAPDEHFLVSSSNGTVLNTTMIDTAARDTARVLIASALTLLVGIIQLIFGGLQIGFIVRYL 215          
The following BLAST results are available for this feature:
BLAST of CN189358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
S2610_MOUSE1.774e-1432.12Solute carrier family 26 member 10 OS=Mus musculus... [more]
S26A2_BUBBU3.952e-1428.86Sulfate transporter OS=Bubalus bubalis GN=SLC26A2 ... [more]
S26A2_BOVIN5.162e-1428.86Sulfate transporter OS=Bos taurus GN=SLC26A2 PE=3 ... [more]
S26A4_RAT6.742e-1431.33Pendrin OS=Rattus norvegicus GN=Slc26a4 PE=2 SV=1[more]
S26A2_RAT8.805e-1426.92Sulfate transporter OS=Rattus norvegicus GN=Slc26a... [more]
S26A7_HUMAN1.150e-1332.35Anion exchange transporter OS=Homo sapiens GN=SLC2... [more]
S26A4_MOUSE1.150e-1330.72Pendrin OS=Mus musculus GN=Slc26a4 PE=2 SV=1[more]
S26A2_MOUSE1.150e-1326.92Sulfate transporter OS=Mus musculus GN=Slc26a2 PE=... [more]
S26A2_HORSE1.502e-1326.95Sulfate transporter OS=Equus caballus GN=SLC26A2 P... [more]
S26A4_HUMAN2.562e-1333.33Pendrin OS=Homo sapiens GN=SLC26A4 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001L17_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001L17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189358 ID=CN189358; Name=CN189358; organism=Citrus sinensis; type=EST; length=734bp
GCAGGCACCTCCGAATTCAGCGTAGCCACTCCTATAACACTGCGCATATC
TTTTGCATTTAGCTCAACCCAAATACGTTCTCCGATATAAAACGCAGCCG
CTGCATTTTATTCTCTCTATCTTGCATTTAGTTAATTAATTAATTAACTA
CATGGATAAGGGTAACGCAGACTACGTGTATCCATCGTCTAAAGAAAATG
TGGAGAATGCACATCGTGTTGCGATTCCCCCACCGCAGCCATTTTTCAAT
TCACTAAAGTATAATCTTAAAGAGACGTTCTTCCCTGATGATCCGCTCAG
GCTATTCAAGAACAAGCCGGCATCTAAGAAGTTCATATTAGGCCTTCAGT
ATGTGTTTCCCATTTTTGAATGGGCTCCGCGTTACAGCTTTCAGTTCTTG
AAAGCTGACCTTATTGCTGGGATCACCATTGCAAGTCTCGCAATTCCTCA
GGGGATTAGTTATGCGAAGCTGGCGAACTTGCCCCCAATTCTTGGCCTAT
ATTCAAGCTTTGTTCCGCCATTGGTTTATGCTATCATGGGGAGCTCCAAA
GATTTGGCAGTTGGAACGGTGGCTGTCGCCTCACTTCTCATAGCTTCATT
CTTGGGGCAAGAAGTTAATTATAATGAGAACCCTAAGCTATATCTTCATC
TTGCTTTCACTGCAACATTTTTTGCTGGTGTTTTTCAAGCTTCCTTGGGA
CTGCTAAGGCTAGGGTTTATCGTGGACTTTTTAT
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