CN189355
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189355 vs. ExPASy Swiss-Prot
Match: RT4I1_DICDI (Reticulon-4-interacting protein 1 homolog, mitochondrial OS=Dictyostelium discoideum GN=rtn4ip1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.820e-11 Identity = 50/176 (28.41%), Postives = 87/176 (49.43%), Query Frame = 1 Query: 100 MKAIVITQPGSPEVLQLQEVED----PQIKDDEVLIKVEATALNRADTLQRKG---SYPPPKGASPYP-GLECSGTILSVGKNVSRWKVGDQVCAL---LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF----MTSHLSPGESFLVHGGSSGIGTFAIQMGK 582 MK I++ G E L L E + P+ +VLIK+ +T++N D + RKG S K P G ECSG I+ +G +V +++GDQV + G + E + V ++ P ++ + +A+ P + T W+ ++ ++ LV+GG+ +G F +Q+ K Sbjct: 1 MKGILLN--GYGESLDLLEYKTDLPVPKPIKSQVLIKIHSTSINPLDNVMRKGYASSIVDLKLKLPIILGRECSGEIVEIGDSVWDYEIGDQVWSASPPFSMGSHCEYITVDESEISLKPKNLTHQQSASIPFASLTAWNAIYNVLPTNKKITTNTKILVNGGNGSVGFFILQLLK 174
BLAST of CN189355 vs. ExPASy Swiss-Prot
Match: MECR_HUMAN (Trans-2-enoyl-CoA reductase, mitochondrial OS=Homo sapiens GN=MECR PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.820e-11 Identity = 48/168 (28.57%), Postives = 82/168 (48.81%), Query Frame = 1 Query: 100 MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVL-PVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR 597 ++A+V G P +V++L+ +E ++ +V +K+ A +N +D +G+Y G E +++VG NV+ K GD V G G AV + + L VPS + L+ AA CT + + L PG+S + + +SG+G IQ+ G+R Sbjct: 43 VRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLR 210
BLAST of CN189355 vs. ExPASy Swiss-Prot
Match: ZDH1_STAES (Zinc-type alcohol dehydrogenase-like protein SE_1777 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_1777 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.602e-11 Identity = 49/174 (28.16%), Postives = 80/174 (45.98%), Query Frame = 1 Query: 166 PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVC---ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP------GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV 660 P E+L+KV++ ++N DT QR P G + G I +G VS ++ GD V + G E + V P+ + + AA+ P T + T+F +S G+S L+ G+ G+G+ A Q+ K G++V TA E+ + ++GADV Sbjct: 26 PHPSGHELLVKVQSISVNPVDTKQRT---MPVDKVPRVLGFDAVGVIEKIGDQVSMFQEGDVVFYSGSPNQNGSNEEYQLIEEYLVAKAPTNLKSEQAASLPLTGLTAYETLFDVFGISKEPSENKGKSLLIINGAGGVGSIATQIAKFYGLKVITTASREDTIKWSVNMGADV 196
BLAST of CN189355 vs. ExPASy Swiss-Prot
Match: PKS5_DICDI (Probable polyketide synthase 5 OS=Dictyostelium discoideum GN=pks5 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.602e-11 Identity = 50/169 (29.59%), Postives = 81/169 (47.93%), Query Frame = 1 Query: 130 SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS--HLSPGESFLVHGGSSGIGTFAIQMGKCQGVR--VFVTAGSEE 624 SP + + + +++D++V +K AT +N D L G +P G E SG I VG NV +KVGD V L + + V ++ PS +S +AA+ P T + ++F ++ ES L+H GS G ++ K +G + +FVT S+E Sbjct: 1803 SPNLEYQLQSKQIKLRDNQVEVKTIATGINNKDYLVYSGLEGSVNSNTPQFGYEFSGIITRVGNNVKDYKVGDNVFG-LSNSCTSSNIIVNHERIQIKPSNISHIEAASIPIDYLTSFMSLFNVGCLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVNSDE 1970
BLAST of CN189355 vs. ExPASy Swiss-Prot
Match: PKS3_DICDI (Probable polyketide synthase 3 OS=Dictyostelium discoideum GN=pks3 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.928e-11 Identity = 53/167 (31.74%), Postives = 81/167 (48.50%), Query Frame = 1 Query: 184 EVLIKVEATALNRADTLQRKGSYPPPKGA-------SPYPGLECSGTILSVGKN-VSRWKVGDQVCALLGGGGY---AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD 645 EV +++++ ALN D L GS PP P G + SG I V KN S +KVGDQV G Y + K + +G + P+ +S + A+ P V T +++ +L ES L+H S G+G ++ + K +G +F+T GS EK +D Sbjct: 1715 EVQVEIKSFALNYKDYLTYIGSVPPEMVNHKTGDINDPEFGSDFSGVITRVSKNNCSEFKVGDQVY----GTAYNTASSKSIIDSGSIYFKPNNLSHEQASTIPVVYSTSLHSIYNIGNLKNYESILIHSASGGVGLSSLNILKWKGHCSYIFLTVGSPEKEKYLRD 1877
BLAST of CN189355 vs. ExPASy Swiss-Prot
Match: ADH1_YEAST (Alcohol dehydrogenase 1 OS=Saccharomyces cerevisiae GN=ADH1 PE=1 SV=4) HSP 1 Score: 67.0106 bits (162), Expect = 9.928e-11 Identity = 53/216 (24.54%), Postives = 91/216 (42.13%), Query Frame = 1 Query: 97 TMKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD--------------QVCAL----------LGG----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV 660 T K ++ + S L+ +++ P+ K +E+LI V+ + + D G +P P G E +G ++ +G+NV WK+GD + C L L G G + + A Q +P G L A TV+ + +++L G + G + G+G+ A+Q K G RV G E K + + +G +V Sbjct: 6 TQKGVIFYE--SHGKLEHKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKAL-KSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEV 218 The following BLAST results are available for this feature:
BLAST of CN189355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 86
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189355 ID=CN189355; Name=CN189355; organism=Citrus sinensis; type=EST; length=665bpback to top |