CN189348

Overview
NameCN189348
Unique NameCN189348
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length651
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADH_FRAAN (Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH PE=3 SV=2)

HSP 1 Score: 374.785 bits (961), Expect = 2.173e-103
Identity = 176/203 (86.70%), Postives = 189/203 (93.10%), Query Frame = 1
Query:   43 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            MS T G+VI C+AAVAWEAGKPLVIEEVEVAPPQ N VR+KIL+TSLCHTDVYFWEAKGQ PLFPRI+GHEAGGIVESVGEGVTDL+ GDHVLPVFTGECKEC HC SEESNMCDLLRINTDRGVM+NDG+SRFSIKGKPIYHFVGTSTFS YTVTHVGC+AKINP +PLDKVC+LSCGISTG GAT+NV KPKKG TVA+FG
Sbjct:    1 MSSTEGKVICCRAAVAWEAGKPLVIEEVEVAPPQANVVRVKILYTSLCHTDVYFWEAKGQNPLFPRIYGHEAGGIVESVGEGVTDLKAGDHVLPVFTGECKECDHCKSEESNMCDLLRINTDRGVMLNDGKSRFSIKGKPIYHFVGTSTFSVYTVTHVGCLAKINPQSPLDKVCILSCGISTGLGATLNVRKPKKGSTVAVFG 203          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSJ (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=ADH2 PE=2 SV=2)

HSP 1 Score: 374.4 bits (960), Expect = 2.838e-103
Identity = 176/200 (88.00%), Postives = 188/200 (94.00%), Query Frame = 1
Query:   52 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            TAG+VI+CKAAVAWEAGKPL IEEVEVAPPQ  EVR+KIL+T+LCHTDVYFWEAKGQTP+FPRI GHEAGGIVESVGEGVT+L PGDHVLPVFTGECKEC HC SEESNMCDLLRIN DRGVMI DG+SRF+IKGKPI+HFVGTSTFSEYTV HVGC+AKINP APLDKVC+LSCG STGFGATVNVAKPKKGQTVAIFG
Sbjct:    3 TAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTELAPGDHVLPVFTGECKECDHCKSEESNMCDLLRINVDRGVMIGDGKSRFTIKGKPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCILSCGFSTGFGATVNVAKPKKGQTVAIFG 202          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSI (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. indica GN=ADH2 PE=2 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 2.838e-103
Identity = 176/200 (88.00%), Postives = 188/200 (94.00%), Query Frame = 1
Query:   52 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            TAG+VI+CKAAVAWEAGKPL IEEVEVAPPQ  EVR+KIL+T+LCHTDVYFWEAKGQTP+FPRI GHEAGGIVESVGEGVT+L PGDHVLPVFTGECKEC HC SEESNMCDLLRIN DRGVMI DG+SRF+IKGKPI+HFVGTSTFSEYTV HVGC+AKINP APLDKVC+LSCG STGFGATVNVAKPKKGQTVAIFG
Sbjct:    3 TAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTELAPGDHVLPVFTGECKECDHCKSEESNMCDLLRINVDRGVMIGDGKSRFTIKGKPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCILSCGFSTGFGATVNVAKPKKGQTVAIFG 202          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADH1_HORVU (Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1 PE=2 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 2.838e-103
Identity = 177/200 (88.50%), Postives = 186/200 (93.00%), Query Frame = 1
Query:   52 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            TAG+VI+CKAAVAWEAGKPL +EEVEVAPPQ  EVR+KILFTSLCHTDVYFWEAKGQ P+FPRIFGHEAGGIVESVGEGVTD+ PGDHVLPVFTGECKECPHC S ESNMCDLLRINTDRGVMI DG+SRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINP APLDKVCVLSCGISTG GA++NVAKP KG TVAIFG
Sbjct:    3 TAGKVIKCKAAVAWEAGKPLTMEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQIPMFPRIFGHEAGGIVESVGEGVTDVAPGDHVLPVFTGECKECPHCKSAESNMCDLLRINTDRGVMIGDGKSRFSIGGKPIYHFVGTSTFSEYTVMHVGCVAKINPEAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAIFG 202          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADH1_PENAM (Alcohol dehydrogenase 1 OS=Pennisetum americanum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 372.474 bits (955), Expect = 1.079e-102
Identity = 176/200 (88.00%), Postives = 186/200 (93.00%), Query Frame = 1
Query:   52 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            TAG+VI+CKAAVAWEAGKPL IEEVEVAPPQ  EVR+KIL+TSLCHTDVYFWEAKGQTP+FPRIFGHEAGGI+ESVGEGVTD+ PGDHVLPVFTGECKECPHC S ESNMCDLLRINT RGVMI DG+SRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINP APLDKVCVLSCGISTG GA++NVAKP KG TVAIFG
Sbjct:    3 TAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIIESVGEGVTDVAPGDHVLPVFTGECKECPHCKSAESNMCDLLRINTVRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPEAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAIFG 202          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADH2_SOLLC (Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN=ADH2 PE=2 SV=2)

HSP 1 Score: 371.703 bits (953), Expect = 1.840e-102
Identity = 176/203 (86.70%), Postives = 186/203 (91.63%), Query Frame = 1
Query:   43 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            MS T GQVIRCKAAVAWEAGKPLV+EEV+VAPPQK EVRLKIL+TSLCHTDVYFWEAKGQ P+FPRI GHEA GIVESVGEGVTDL PGDHVLPVFTGECK+C HC SEESNMC LLRINTDRGVM+NDG+SRFSI G PIYHFVGTSTFSEYTV HVGCVAKINP APLDKVCVLSCGISTG GA++NVAKP KG +VAIFG
Sbjct:    1 MSTTVGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEAAGIVESVGEGVTDLAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMLNDGKSRFSINGNPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGASLNVAKPTKGSSVAIFG 203          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADH1_MAIZE (Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 SV=1)

HSP 1 Score: 370.933 bits (951), Expect = 3.138e-102
Identity = 175/200 (87.50%), Postives = 185/200 (92.50%), Query Frame = 1
Query:   52 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            TAG+VI+CKAAVAWEAGKPL IEEVEVAPPQ  EVR+KILFTSLCHTDVYFWEAKGQTP+FPRIFGHEAGGI+ESVGEGVTD+ PGDHVLPVFTGECKEC HC S ESNMCDLLRINTDRGVMI DG+SRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINP APLDKVCVLSCG STG GA++NVAKP KG TVA+FG
Sbjct:    3 TAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIIESVGEGVTDVAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIADGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPQAPLDKVCVLSCGYSTGLGASINVAKPPKGSTVAVFG 202          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADH3_HORVU (Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3 PE=3 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 4.531e-101
Identity = 172/200 (86.00%), Postives = 186/200 (93.00%), Query Frame = 1
Query:   52 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            TAG+VI+CKAAVAWEAGKPL IEEVEVAPPQ  EVR+KIL+T+LCHTDVYFWEAKGQTP+FPRI GHEAGGIVESVGEGVT+L PGDHVLPVFTGECK+C HC SEESN+CDLLRIN DRGVMI DGQSRF+I GKPI+HFVGTSTFSEYTV HVGC+AKINP APLDKVCVLSCG+STG GAT+NVAKPKKG TVAIFG
Sbjct:    3 TAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTELVPGDHVLPVFTGECKDCAHCKSEESNLCDLLRINVDRGVMIGDGQSRFTINGKPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCVLSCGLSTGLGATLNVAKPKKGSTVAIFG 202          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADH2_MAIZE (Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 SV=1)

HSP 1 Score: 362.844 bits (930), Expect = 8.546e-100
Identity = 169/200 (84.50%), Postives = 184/200 (92.00%), Query Frame = 1
Query:   52 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            TAG+VI+C+AAV WEAGKPL IEEVEVAPPQ  EVR+KIL+T+LCHTDVYFWEAKGQTP+FPRI GHEAGGIVESVGEGVTD+ PGDHVLPVFTGECKEC HC SEESNMCDLLRIN DRGVMI DG+SRF+I G+PI+HFVGTSTFSEYTV HVGC+AKINP APLDKVC+LSCGISTG GAT+NVAKP KG TVAIFG
Sbjct:    3 TAGKVIKCRAAVTWEAGKPLSIEEVEVAPPQAMEVRIKILYTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTDVAPGDHVLPVFTGECKECAHCKSEESNMCDLLRINVDRGVMIGDGKSRFTISGQPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCILSCGISTGLGATLNVAKPAKGSTVAIFG 202          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADH2_HORVU (Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2 PE=3 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 7.999e-98
Identity = 168/200 (84.00%), Postives = 183/200 (91.50%), Query Frame = 1
Query:   52 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            TAG+VI+CKAAVAWEAGKPL +EEVE APPQ  EVR KIL+T+LCHTDVYFWEA GQTP+FPRI GHEAGGIVESVGEGVT+L PGDHVLPVFTGECKEC HC SEESN+CDLLRIN DRGVMI+DGQSRF+I GKPI+HF+GTSTFSEYTV HVGCVAKI+P APLDKVC+LSCGISTG GAT+NV KPKKG TVAIFG
Sbjct:    3 TAGKVIKCKAAVAWEAGKPLSMEEVEDAPPQAMEVRDKILYTALCHTDVYFWEANGQTPVFPRILGHEAGGIVESVGEGVTELVPGDHVLPVFTGECKECAHCMSEESNLCDLLRINVDRGVMIDDGQSRFTIDGKPIFHFLGTSTFSEYTVIHVGCVAKIDPEAPLDKVCLLSCGISTGLGATLNVTKPKKGMTVAIFG 202          
The following BLAST results are available for this feature:
BLAST of CN189348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
ADH_FRAAN2.173e-10386.70Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH ... [more]
ADH2_ORYSJ2.838e-10388.00Alcohol dehydrogenase 2 OS=Oryza sativa subsp. jap... [more]
ADH2_ORYSI2.838e-10388.00Alcohol dehydrogenase 2 OS=Oryza sativa subsp. ind... [more]
ADH1_HORVU2.838e-10388.50Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1... [more]
ADH1_PENAM1.079e-10288.00Alcohol dehydrogenase 1 OS=Pennisetum americanum G... [more]
ADH2_SOLLC1.840e-10286.70Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN... [more]
ADH1_MAIZE3.138e-10287.50Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 S... [more]
ADH3_HORVU4.531e-10186.00Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3... [more]
ADH2_MAIZE8.546e-10084.50Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 S... [more]
ADH2_HORVU7.999e-9884.00Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001L11_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001L11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189348 ID=CN189348; Name=CN189348; organism=Citrus sinensis; type=EST; length=651bp
CTTATTTTACAGGTGTTGAGAGTATCATCATTCATCATCACCATGTCTGG
CACAGCTGGTCAAGTTATTCGCTGCAAAGCGGCGGTGGCATGGGAGGCGG
GGAAGCCACTAGTGATTGAAGAAGTGGAGGTGGCTCCACCACAGAAAAAT
GAAGTTCGATTGAAGATCCTCTTCACCTCTTTATGCCATACTGATGTTTA
CTTCTGGGAAGCCAAGGGACAAACACCTCTCTTTCCTCGCATTTTTGGTC
ATGAAGCTGGAGGGATTGTAGAAAGTGTAGGGGAGGGGGTAACTGATCTC
CAACCAGGAGACCATGTTCTTCCTGTATTCACAGGAGAGTGCAAGGAATG
TCCTCACTGTCATTCAGAGGAAAGCAATATGTGTGACCTCCTCCGGATCA
ATACTGACAGGGGTGTTATGATTAATGATGGTCAGTCAAGGTTCTCGATT
AAGGGGAAGCCAATTTACCATTTTGTGGGCACTTCTACCTTCAGTGAATA
CACTGTTACCCACGTCGGTTGTGTTGCTAAGATCAATCCTGCTGCCCCTC
TTGACAAAGTTTGTGTACTCAGCTGCGGAATCTCCACAGGTTTTGGGGCT
ACTGTTAATGTTGCCAAACCGAAGAAAGGCCAGACTGTTGCCATTTTTGG
A
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