CN189348

Overview
NameCN189348
Unique NameCN189348
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length651
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5386 contig Csv1_Contig5386:39..689. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 4.271e-75
Identity = 134/202 (66.34%), Postives = 155/202 (76.73%), Query Frame = 1
Query:   46 SGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            S T GQVI CKAAVAWEA KP+ IE+V+VAPPQ  EVR+KILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT++QPGDHV+P +  EC+EC  C S ++N+C  +R  T  GVM+ND +SRFSI GKPIYHF+GTSTFS+YTV H   VAKINP APLDKVC+L CG+STG GA  N AK + G  VAIFG
Sbjct:    3 SSTQGQVITCKAAVAWEANKPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFG 204          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 9.515e-75
Identity = 133/202 (65.84%), Postives = 155/202 (76.73%), Query Frame = 1
Query:   46 SGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            S T GQVI CKAAVAWEA +P+ IE+V+VAPPQ  EVR+KILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT++QPGDHV+P +  EC+EC  C S ++N+C  +R  T  GVM+ND +SRFSI GKPIYHF+GTSTFS+YTV H   VAKINP APLDKVC+L CG+STG GA  N AK + G  VAIFG
Sbjct:    3 SSTQGQVITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFG 204          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 6.167e-74
Identity = 133/202 (65.84%), Postives = 154/202 (76.24%), Query Frame = 1
Query:   46 SGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            S T GQVI CKAAVA+E  KPLVIE+V+VAPPQ  EVR+KILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVTD+QPGDHV+P +  ECKEC  C S ++N+C  +R  T  GVM+ND +SRFS+ GKPIYHF+GTSTFS+YTV H   VAKINP APLDKVC+L CG+ TG GA  N AK + G  VA+FG
Sbjct:    3 SPTQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTDVQPGDHVIPCYQAECKECKFCKSGKTNLCGKVRSATGVGVMMNDMKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVPTGLGAVWNTAKVESGSVVAVFG 204          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 269.24 bits (687), Expect = 1.286e-71
Identity = 127/200 (63.50%), Postives = 152/200 (76.00%), Query Frame = 1
Query:   52 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            T GQVI CKAAVA+E  KPLVIE+V+VAPPQ  EVR+KIL+T+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT++Q GDHV+P +  EC+EC  C S ++N+C  +R  T  G+M+ND +SRFS+ GKPIYHF+GTSTFS+YTV H   VAKI+P APLDKVC+L CG+ TG GA  N AK + G  VAIFG
Sbjct:    3 TQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFG 202          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 2.193e-71
Identity = 130/200 (65.00%), Postives = 151/200 (75.50%), Query Frame = 1
Query:   52 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            T GQVI CKAAVAWE  KPL IE+VEVAPPQ NEVR++ILFT+LCHTD Y    K    LFP I GHEA GIVESVGEGVTD++PGDHV+P +  EC EC  C S ++N+C  +R  T  GVM+ D +SRFS+KGKPIYHF+GTSTFS+YTV H   VAKI+P APLDKVC+L CG+ TG GA  N AK + G  VAIFG
Sbjct:    2 TQGQVITCKAAVAWEPNKPLTIEDVEVAPPQANEVRIQILFTALCHTDAYTLGGKDPEGLFPCILGHEAAGIVESVGEGVTDVKPGDHVIPSYQAECGECKFCKSPKTNLCGKVRAATGVGVMMADRKSRFSVKGKPIYHFMGTSTFSQYTVVHDVSVAKIHPDAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAIFG 201          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADHL6_ARATH (Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2)

HSP 1 Score: 249.98 bits (637), Expect = 8.073e-66
Identity = 117/197 (59.39%), Postives = 150/197 (76.14%), Query Frame = 1
Query:   61 QVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            QVI C AAVAW AG+PLV+EEVEV+PPQ  E+R+K++ TSLC +D+  WE++    L PRIFGHEA GIVES+GEGVT+ + GDHVL VFTGEC  C HC S +SNMC +L +   +G+M +D ++RFSIKGKP+YH+   S+FSEYTV H GC  K++P APL K+C+LSCG++ G GA  NVA  +KG +V IFG
Sbjct:   12 QVITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWESQS---LLPRIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVLGMER-KGLMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVQKGSSVVIFG 204          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADHX_RAT (Alcohol dehydrogenase class-3 OS=Rattus norvegicus GN=Adh5 PE=1 SV=2)

HSP 1 Score: 248.44 bits (633), Expect = 2.349e-65
Identity = 121/199 (60.80%), Postives = 148/199 (74.37%), Query Frame = 1
Query:   55 AGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            A QVIRCKAAVAWEAGKPL IEE+EVAPPQ +EVR+KI+ T++CHTD Y          FP I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R+   +G+M  DG SRF+ KGKPI HF+GTSTFSEYTV     VAKI+P+APLDKVC+L CGISTG+GA VN AK + G T A+FG
Sbjct:    2 ANQVIRCKAAVAWEAGKPLSIEEIEVAPPQAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKPILHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNTAKVEPGSTCAVFG 199          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADHX_MOUSE (Alcohol dehydrogenase class-3 OS=Mus musculus GN=Adh5 PE=1 SV=3)

HSP 1 Score: 245.743 bits (626), Expect = 1.523e-64
Identity = 119/199 (59.80%), Postives = 148/199 (74.37%), Query Frame = 1
Query:   55 AGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            A QVIRCKAAVAWEAGKPL IEE+EVAPP+ +EVR+KIL T++CHTD Y          FP I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R+   +G+M  DG SRF+ KGK ++HF+GTSTFSEYTV     VAKI+P+APLDKVC+L CGISTG+GA VN AK + G T A+FG
Sbjct:    2 ANQVIRCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKILATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKSVFHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNTAKVEPGSTCAVFG 199          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADHL4_ARATH (Alcohol dehydrogenase-like 4 OS=Arabidopsis thaliana GN=At1g64710 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 2.871e-63
Identity = 115/203 (56.65%), Postives = 151/203 (74.38%), Query Frame = 1
Query:   52 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTP-LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRF--SIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            T G+VI CKAAVAW AG+PLV+E+V+V PPQ+ EVR++ILFTS+CHTD+  W+ + +    +PRI GHEA GIVESVGEGV ++  GDHVLP+FTGEC +C  C  + +N+C+  R++  + VM+ DG++RF  S   KPIYHF+ TSTFSEYTV    CV K++P  PL+K+ +LSCG+STG GA  NVA  +   TVAIFG
Sbjct:    3 TQGKVITCKAAVAWGAGEPLVMEDVKVDPPQRLEVRIRILFTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEEMMAGDHVLPIFTGECGDCRVCKRDGANLCERFRVDPMKKVMVTDGKTRFFTSKDNKPIYHFLNTSTFSEYTVIDSACVLKVDPLFPLEKISLLSCGVSTGVGAAWNVADIQPASTVAIFG 205          
BLAST of CN189348 vs. ExPASy Swiss-Prot
Match: ADH1_ZEALU (Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurians GN=ADH1 PE=3 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 8.355e-63
Identity = 112/129 (86.82%), Postives = 118/129 (91.47%), Query Frame = 1
Query:  265 IVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFG 651
            I+ESVGEGVTD+ PGDHVLPVFTGECKEC HC S ESNMCDLLRINTDRGVMI DG+SRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINP APLDKVCVLSCGISTG GA++NVAKP KG TVA+FG
Sbjct:    1 IIESVGEGVTDVAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPQAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAVFG 129          
The following BLAST results are available for this feature:
BLAST of CN189348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
ADHX_ORYSI4.271e-7566.34Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ORYSJ9.515e-7565.84Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_MAIZE6.167e-7465.84Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADHX_ARATH1.286e-7163.50Alcohol dehydrogenase class-3 OS=Arabidopsis thali... [more]
ADHX_PEA2.193e-7165.00Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADHL6_ARATH8.073e-6659.39Alcohol dehydrogenase-like 6 OS=Arabidopsis thalia... [more]
ADHX_RAT2.349e-6560.80Alcohol dehydrogenase class-3 OS=Rattus norvegicus... [more]
ADHX_MOUSE1.523e-6459.80Alcohol dehydrogenase class-3 OS=Mus musculus GN=A... [more]
ADHL4_ARATH2.871e-6356.65Alcohol dehydrogenase-like 4 OS=Arabidopsis thalia... [more]
ADH1_ZEALU8.355e-6386.82Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurian... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001L11_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001L11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189348 ID=CN189348; Name=CN189348; organism=Citrus sinensis; type=EST; length=651bp
CTTATTTTACAGGTGTTGAGAGTATCATCATTCATCATCACCATGTCTGG
CACAGCTGGTCAAGTTATTCGCTGCAAAGCGGCGGTGGCATGGGAGGCGG
GGAAGCCACTAGTGATTGAAGAAGTGGAGGTGGCTCCACCACAGAAAAAT
GAAGTTCGATTGAAGATCCTCTTCACCTCTTTATGCCATACTGATGTTTA
CTTCTGGGAAGCCAAGGGACAAACACCTCTCTTTCCTCGCATTTTTGGTC
ATGAAGCTGGAGGGATTGTAGAAAGTGTAGGGGAGGGGGTAACTGATCTC
CAACCAGGAGACCATGTTCTTCCTGTATTCACAGGAGAGTGCAAGGAATG
TCCTCACTGTCATTCAGAGGAAAGCAATATGTGTGACCTCCTCCGGATCA
ATACTGACAGGGGTGTTATGATTAATGATGGTCAGTCAAGGTTCTCGATT
AAGGGGAAGCCAATTTACCATTTTGTGGGCACTTCTACCTTCAGTGAATA
CACTGTTACCCACGTCGGTTGTGTTGCTAAGATCAATCCTGCTGCCCCTC
TTGACAAAGTTTGTGTACTCAGCTGCGGAATCTCCACAGGTTTTGGGGCT
ACTGTTAATGTTGCCAAACCGAAGAAAGGCCAGACTGTTGCCATTTTTGG
A
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