CN189342

Overview
NameCN189342
Unique NameCN189342
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN189342_ssr19 microsatellite CN189342_ssr19:19..28. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13557 contig Csv1_Contig13557:18..713. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189342 vs. ExPASy Swiss-Prot
Match: ENO_EXIS2 (Enolase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=eno PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.561e-49
Identity = 109/199 (54.77%), Postives = 133/199 (66.83%), Query Frame = 1
Query:   79 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVI 672
            IT + AR+I DSRGNPTVEV+V T DG   RA VPSGASTG +EA+ELRDG  S YLGKGV KAV NVN  + P + G D  +Q  ID  M+  LDGT N     K   GANAIL +S+A  +A A    +PLY +   L G     LP P  N+INGGSHA N +  QEFMI+PVGA +FKEA++MG E++H LK+V+
Sbjct:    4 ITEIYAREILDSRGNPTVEVEVYTEDGGFGRALVPSGASTGEHEAVELRDGDKSRYLGKGVLKAVDNVNEKLAPEIIGYDVFDQAGIDKKMID-LDGTKN-----KGNFGANAILGISMAAARAAADELGLPLYTY---LGGFNAKTLPTPMMNIINGGSHADNNVDFQEFMIMPVGAPTFKEALRMGAEIFHALKSVL 193          
BLAST of CN189342 vs. ExPASy Swiss-Prot
Match: ENO_CHLAA (Enolase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=eno PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.561e-49
Identity = 113/203 (55.67%), Postives = 133/203 (65.52%), Query Frame = 1
Query:   67 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVI 672
            M+  I A+ AR++ DSRGNPT+EVDV    G V RA VPSGASTG +EALELRDG  S Y GKGV KAV  VN  I  AL G D  +Q A+D  ++  LDGT N     K KLGANAIL VSLA  KA A    +PLY++   L G    VLPVP  N++NGG HA N    QEFMI+PVGA SF+E ++ G E+YH LK VI
Sbjct:    1 MSTLIEAIVAREVLDSRGNPTIEVDVRLESGDVGRAIVPSGASTGAHEALELRDGDKSRYNGKGVLKAVQAVNEDIAEALIGFDAADQIALDQELI-ALDGTPN-----KSKLGANAILGVSLAAAKAAAAAFGLPLYRY---LGGVYAHVLPVPMMNIMNGGQHATNSTDFQEFMIMPVGAESFREGLRWGAEIYHMLKKVI 194          
BLAST of CN189342 vs. ExPASy Swiss-Prot
Match: ENO_CELJU (Enolase OS=Cellvibrio japonicus (strain Ueda107) GN=eno PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.561e-49
Identity = 108/203 (53.20%), Postives = 134/203 (66.01%), Query Frame = 1
Query:   79 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKK 681
            I  +KA ++ DSRGNPTV  +V    G V  A  PSGASTG  EALELRDG  S YLGKGV  AV+N+N  I   L GKD  +Q A+D  M+   DGT N     K  LGANAILAVSLA  KA A  KK+PLY HIA+L+G      +PVP  N+INGG HA N + +QEFM+ PVGA +F EA+++G E++H+LK ++  K
Sbjct:    4 IVDIKAFEVLDSRGNPTVMAEVILESGAVGSACAPSGASTGSREALELRDGDKSRYLGKGVLTAVNNINTTIKNLLVGKDALDQRALDKAMIDA-DGTDN-----KSVLGANAILAVSLAAAKAAAVAKKVPLYAHIADLNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMVQPVGAKTFAEALRIGAEIFHNLKKILHDK 200          
BLAST of CN189342 vs. ExPASy Swiss-Prot
Match: ENO_SYNPX (Enolase OS=Synechococcus sp. (strain WH8102) GN=eno PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.039e-49
Identity = 105/203 (51.72%), Postives = 138/203 (67.98%), Query Frame = 1
Query:   73 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKK 681
            + I  + AR++ DSRGNPTVE +V    G + RA VPSGASTG +EA ELRDGG  Y+GKGVS+AV+++   I P L G    +Q A+D  M+ +LDG+ N     K  LGANAILAVS+A  +A A+   +PLY++   L G    +LPVP  NVINGG+HA N L  QEFM++P GA SF+EA++MG EV+H LK ++K K
Sbjct:    7 LVIDTIVAREVLDSRGNPTVEAEVLLEGGAMGRAIVPSGASTGAHEAHELRDGGDRYMGKGVSQAVTHIEERIAPTLCGLSALDQAAVDAAML-ELDGSDN-----KSSLGANAILAVSMATARAAANGLGLPLYRY---LGGPMANLLPVPLMNVINGGAHAANSLDFQEFMLVPHGAPSFREALRMGTEVFHTLKGLLKAK 200          
BLAST of CN189342 vs. ExPASy Swiss-Prot
Match: ENO_STRZT (Enolase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=eno PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.039e-49
Identity = 111/202 (54.95%), Postives = 135/202 (66.83%), Query Frame = 1
Query:   79 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKK 681
            IT V AR++ DSRGNPT+EV+V T  G   R  VPSGASTG +EA+ELRDG  S Y G G  KAV NVN II  A+ G D  +Q AID  M+  LDGT N     K KLGANAIL VS+AV +A A   +IPLY +   L G    VLP P  N+INGGSH+   +A QEFMILPVGA +FKEA++ G E++H LK ++K +
Sbjct:    4 ITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYGGLGTQKAVDNVNNIIAEAIIGYDVRDQQAIDRAMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADYLEIPLYSY---LGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMILPVGAPTFKEALRYGAEIFHALKKILKSR 196          
BLAST of CN189342 vs. ExPASy Swiss-Prot
Match: ENO_STRZP (Enolase OS=Streptococcus pneumoniae (strain P1031) GN=eno PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.039e-49
Identity = 111/202 (54.95%), Postives = 135/202 (66.83%), Query Frame = 1
Query:   79 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKK 681
            IT V AR++ DSRGNPT+EV+V T  G   R  VPSGASTG +EA+ELRDG  S Y G G  KAV NVN II  A+ G D  +Q AID  M+  LDGT N     K KLGANAIL VS+AV +A A   +IPLY +   L G    VLP P  N+INGGSH+   +A QEFMILPVGA +FKEA++ G E++H LK ++K +
Sbjct:    4 ITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYGGLGTQKAVDNVNNIIAEAIIGYDVRDQQAIDRAMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADYLEIPLYSY---LGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMILPVGAPTFKEALRYGAEIFHALKKILKSR 196          
BLAST of CN189342 vs. ExPASy Swiss-Prot
Match: ENO_STRZJ (Enolase OS=Streptococcus pneumoniae (strain JJA) GN=eno PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.039e-49
Identity = 111/202 (54.95%), Postives = 135/202 (66.83%), Query Frame = 1
Query:   79 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKK 681
            IT V AR++ DSRGNPT+EV+V T  G   R  VPSGASTG +EA+ELRDG  S Y G G  KAV NVN II  A+ G D  +Q AID  M+  LDGT N     K KLGANAIL VS+AV +A A   +IPLY +   L G    VLP P  N+INGGSH+   +A QEFMILPVGA +FKEA++ G E++H LK ++K +
Sbjct:    4 ITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYGGLGTQKAVDNVNNIIAEAIIGYDVRDQQAIDRAMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADYLEIPLYSY---LGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMILPVGAPTFKEALRYGAEIFHALKKILKSR 196          
BLAST of CN189342 vs. ExPASy Swiss-Prot
Match: ENO_STRS7 (Enolase OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=eno PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.039e-49
Identity = 110/202 (54.46%), Postives = 135/202 (66.83%), Query Frame = 1
Query:   79 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKK 681
            IT V AR++ DSRGNPT+EV+V T  G   R  VPSGASTG +EA+ELRDG  S YLG G  KAV NVN II  A+ G D  +Q AID  M+  LDGT N     K KLGANAIL VS+AV +A A   ++PLY +   L G    VLP P  N+INGGSH+   +A QEFMI+PVGA +FKE ++ G EV+H LK ++K +
Sbjct:    4 ITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYLGLGTQKAVDNVNNIIAEAIIGYDVRDQQAIDRAMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADYLEVPLYTY---LGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMIMPVGAPTFKEGLRWGAEVFHALKKILKAR 196          
BLAST of CN189342 vs. ExPASy Swiss-Prot
Match: ENO_STRR6 (Enolase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=eno PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.039e-49
Identity = 111/202 (54.95%), Postives = 135/202 (66.83%), Query Frame = 1
Query:   79 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKK 681
            IT V AR++ DSRGNPT+EV+V T  G   R  VPSGASTG +EA+ELRDG  S Y G G  KAV NVN II  A+ G D  +Q AID  M+  LDGT N     K KLGANAIL VS+AV +A A   +IPLY +   L G    VLP P  N+INGGSH+   +A QEFMILPVGA +FKEA++ G E++H LK ++K +
Sbjct:    4 ITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYGGLGTQKAVDNVNNIIAEAIIGYDVRDQQAIDRAMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADYLEIPLYSY---LGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMILPVGAPTFKEALRYGAEIFHALKKILKSR 196          
BLAST of CN189342 vs. ExPASy Swiss-Prot
Match: ENO_STRPS (Enolase OS=Streptococcus pneumoniae (strain CGSP14) GN=eno PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.039e-49
Identity = 111/202 (54.95%), Postives = 135/202 (66.83%), Query Frame = 1
Query:   79 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKK 681
            IT V AR++ DSRGNPT+EV+V T  G   R  VPSGASTG +EA+ELRDG  S Y G G  KAV NVN II  A+ G D  +Q AID  M+  LDGT N     K KLGANAIL VS+AV +A A   +IPLY +   L G    VLP P  N+INGGSH+   +A QEFMILPVGA +FKEA++ G E++H LK ++K +
Sbjct:    4 ITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYGGLGTQKAVDNVNNIIAEAIIGYDVRDQQAIDRAMIA-LDGTPN-----KGKLGANAILGVSIAVARAAADYLEIPLYSY---LGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMILPVGAPTFKEALRYGAEIFHALKKILKSR 196          
The following BLAST results are available for this feature:
BLAST of CN189342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_EXIS21.561e-4954.77Enolase OS=Exiguobacterium sibiricum (strain DSM 1... [more]
ENO_CHLAA1.561e-4955.67Enolase OS=Chloroflexus aurantiacus (strain ATCC 2... [more]
ENO_CELJU1.561e-4953.20Enolase OS=Cellvibrio japonicus (strain Ueda107) G... [more]
ENO_SYNPX2.039e-4951.72Enolase OS=Synechococcus sp. (strain WH8102) GN=en... [more]
ENO_STRZT2.039e-4954.95Enolase OS=Streptococcus pneumoniae (strain Taiwan... [more]
ENO_STRZP2.039e-4954.95Enolase OS=Streptococcus pneumoniae (strain P1031)... [more]
ENO_STRZJ2.039e-4954.95Enolase OS=Streptococcus pneumoniae (strain JJA) G... [more]
ENO_STRS72.039e-4954.46Enolase OS=Streptococcus equi subsp. zooepidemicus... [more]
ENO_STRR62.039e-4954.95Enolase OS=Streptococcus pneumoniae (strain ATCC B... [more]
ENO_STRPS2.039e-4954.95Enolase OS=Streptococcus pneumoniae (strain CGSP14... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001L08_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001L08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189342 ID=CN189342; Name=CN189342; organism=Citrus sinensis; type=EST; length=696bp
GAGGGTCGCACTCACAGACTCTCTCTCTCGTTCTAGATCTTTCTTCGCTT
TTCCAGCTTTCAGAAAATGGCAATAACCATCACTGCCGTCAAAGCCAGGC
AGATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCGACGTGACAACA
TCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGTGCATCCACCGG
AATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGATTACCTAGGCA
AGGGTGTATCGAAGGCTGTTAGCAATGTCAACGCCATCATTGGCCCTGCA
CTCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGACAACTATATGGT
ACAACAACTTGATGGAACTGTAAATGAGTGGGGTTGGTGCAAACAGAAGC
TTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTCTGCAAGGCTGGT
GCACATGTCAAGAAGATTCCTCTTTACAAGCATATTGCCGAACTCTCTGG
TAACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGTCATTAATGGTG
GATCACATGCTGGAAACAAACTTGCTATGCAGGAGTTTATGATTCTTCCT
GTAGGAGCTTCCTCTTTCAAAGAAGCCATGAAGATGGGTGTAGAAGTATA
TCACCATCTGAAGGCTGTGATTAAAAAGAAATACGGCCAGGATGCT
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