CN189340
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_OSTLU (Protein translocase subunit secA, chloroplastic OS=Ostreococcus lucimarinus (strain CCE9901) GN=secA PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.377e-57 Identity = 113/216 (52.31%), Postives = 149/216 (68.98%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 LA N+ +LV R F+F I+DEVDS+LIDE R PL+ISG A K RY AAK+A+ + HY V+ K SV L+EEG AE L+ DL+D WA +++NA+KAKE +RDV YIVR + +I++E +GR + RRWS+G+HQAVEAKEG+ IQ ++V +A +TYQ+ FK YPKL GMTGTA+TE EF ++E+ V VPTN P R D Sbjct: 184 LAQNTGELVQR---DFNFCIIDEVDSILIDEARTPLIISGVADKPSERYIQAAKIADAFEKDYHYKVDEKQKSVLLSEEGYEAAEDLLQVTDLYDPRTQWALYIINAIKAKELQKRDVNYIVRGQEIIIVDEFSGRTMQGRRWSDGLHQAVEAKEGVTIQNETVTIASVTYQAFFKSYPKLGGMTGTAETEITEFSNIYELEVAVVPTNRPVSRED 396
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_THAPS (Protein translocase subunit secA OS=Thalassiosira pseudonana GN=secA PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 5.295e-57 Identity = 108/217 (49.77%), Postives = 154/217 (70.97%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVDL 655 +A+N Q+V+ PF++ IVDEVDS+ IDE + PL+IS + +Y VAA+VAE L +H+ V+ KN ++ LTE+G A E L+ DL++ NDPW ++++A+KA + R+V YIV+N + +I++E TGR+ RRW+EG+HQAVEAKEG+ I+ ++ A ITYQ+ F LYPKLSGMTGTAKT E EF K++ +PV E+PT PN+R DL Sbjct: 185 MASNLSQVVL---PPFNYCIVDEVDSIFIDEAQVPLIISQAVETCIDKYIVAAEVAEYLEVNVHFKVDEKNRNIILTEQGTAQIEKILQVEDLYNPNDPWIPYILSAIKATALFFRNVHYIVQNNQIIIVDEFTGRIMPDRRWNEGLHQAVEAKEGVPIRQNTETAASITYQNFFLLYPKLSGMTGTAKTSEVEFEKIYNLPVEEIPTARPNLRKDL 398
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_PEA (Protein translocase subunit secA, chloroplastic OS=Pisum sativum GN=secA PE=2 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 6.916e-57 Identity = 113/216 (52.31%), Postives = 152/216 (70.37%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 LA + E+LV+R F++ ++DEVDS+LIDE R PL+ISG A K +Y AAK+A+ + +HYTV+ K SV L+E+G AE L DL+D + WA FV+NA+KAKE + RDV YI+R + LI++E TGRV + RRWS+G+HQAVEAKEGL IQ ++V +A I+YQ+ F +PKL GMTGTA TE EF ++++ V VPTN P IR D Sbjct: 253 LATSVEELVIRG---FNYCVIDEVDSILIDEARTPLIISGPAEKSSDQYFKAAKIADAFERDIHYTVDEKQKSVLLSEQGYEDAEEILAVKDLYDPREQWASFVINAIKAKELFLRDVNYIIRGKEVLIVDEFTGRVMQGRRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAATEITEFESIYKLKVTIVPTNKPMIRKD 465
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_SYNP2 (Protein translocase subunit secA OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=secA PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 9.032e-57 Identity = 108/223 (48.43%), Postives = 155/223 (69.51%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH------YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVDL 655 +A +++V R PF++ I+DEVDS+L+DE R PL+ISG+ + +Y AA++A+ LV + Y V+ K +V +T+EG A AE L DL+DE +PWA ++ NA+KAKE +++DV YIVR + +I++E TGR+ RRWS+G+HQA+EA+EG+ IQ ++ +A ITYQ+ F LYPKLSGMTGTAKTEE EF K++ + V +PTN P R DL Sbjct: 194 MATTIQEVVQR---PFNYCIIDEVDSILVDEARTPLIISGQIERPTEKYLQAAEIAKQLVPQVEEDGPGDYEVDEKARNVLMTDEGFAKAEQLLGVTDLYDEQNPWAHYIFNAVKAKELFKKDVNYIVRGDEVVIVDEFTGRIMPGRRWSDGLHQAIEAQEGVTIQKETQTLANITYQNFFLLYPKLSGMTGTAKTEETEFEKVYNLEVTIIPTNRPTKRQDL 413
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_ARATH (Protein translocase subunit secA, chloroplastic OS=Arabidopsis thaliana GN=secA PE=1 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 9.032e-57 Identity = 110/211 (52.13%), Postives = 149/211 (70.62%), Query Frame = 2 Query: 20 EQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 E+LV+R F++ ++DEVDS+LIDE R PL+ISG A K +Y AAK+A + +HYTV+ K +V LTE+G AE L+ DL+D + WA +V+NA+KAKE + RDV YI+R + LI++E TGRV + RRWS+G+HQAVEAKEGL IQ +S+ +A I+YQ+ F +PKL GMTGTA TE EF ++++ V VPTN P IR D Sbjct: 271 EELVLR---DFNYCVIDEVDSILIDEARTPLIISGPAEKPSDQYYKAAKIASAFERDIHYTVDEKQKTVLLTEQGYEDAEEILDVKDLYDPREQWASYVLNAIKAKELFLRDVNYIIRAKEVLIVDEFTGRVMQGRRWSDGLHQAVEAKEGLPIQNESITLASISYQNFFLQFPKLCGMTGTASTESAEFESIYKLKVTIVPTNKPMIRKD 478
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_ANTSP (Protein translocase subunit secA OS=Antithamnion sp. GN=secA PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 9.032e-57 Identity = 110/217 (50.69%), Postives = 152/217 (70.05%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVDL 655 +A E LV R F FAI+DE+DS+LIDE R PL+ISG A+ + Y A KVA LL Q Y ++ KN ++ L E GI +E L+ N+L+D PW ++++NALKAKE + ++ YIV+N + +I++E TGR+ E RRWS+G+HQA+EAKE KIQ ++ +A ITYQ+LF LY KLSGMTGTAKTEE E +++++ V+E+PTN N R DL Sbjct: 183 MAIQKEDLVQR---DFFFAIIDEIDSILIDEARTPLIISGPANNKLTEYLEANKVANLLNQNTDYEIDEKNKNIILNENGIKKSENILDINNLYDIQKPWIKYILNALKAKEIFIKNKDYIVKNNEIVIVDEFTGRIMEGRRWSDGLHQAIEAKEKQKIQQENKTLASITYQNLFLLYEKLSGMTGTAKTEEAELEQIYKLKVVEIPTNKLNQRKDL 396
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_SYNP6 (Protein translocase subunit secA OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=secA PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.012e-56 Identity = 113/226 (50.00%), Postives = 157/226 (69.47%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH----------YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 +AA E++V R PF++A++DEVDS+LIDE R PL+ISG+ + +Y A++VA LL + + Y V+ K +V LT++G AE L +DL+D NDPWA ++ NA+KAKE + +DV YIVR G+ +I++E TGRV RRWS+G+HQAVE+KEG++IQ ++ +A ITYQ+ F LYPKLSGMTGTAKTEE EF K +++ V VPTN + R D Sbjct: 195 MAAVIEEVVQR---PFNYAVIDEVDSILIDEARTPLIISGQVDRPSEKYMRASEVAALLQRSTNTDSEEEPDGDYEVDEKGRNVLLTDQGFINAEQLLGVSDLFDSNDPWAHYIFNAIKAKELFIKDVNYIVRGGEIVIVDEFTGRVMPGRRWSDGLHQAVESKEGVEIQPETQTLASITYQNFFLLYPKLSGMTGTAKTEELEFEKTYKLEVTVVPTNRVSRRRD 417
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_SYNE7 (Protein translocase subunit secA OS=Synechococcus elongatus (strain PCC 7942) GN=secA PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.012e-56 Identity = 113/226 (50.00%), Postives = 157/226 (69.47%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH----------YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 +AA E++V R PF++A++DEVDS+LIDE R PL+ISG+ + +Y A++VA LL + + Y V+ K +V LT++G AE L +DL+D NDPWA ++ NA+KAKE + +DV YIVR G+ +I++E TGRV RRWS+G+HQAVE+KEG++IQ ++ +A ITYQ+ F LYPKLSGMTGTAKTEE EF K +++ V VPTN + R D Sbjct: 195 MAAVIEEVVQR---PFNYAVIDEVDSILIDEARTPLIISGQVDRPSEKYMRASEVAALLQRSTNTDSEEEPDGDYEVDEKGRNVLLTDQGFINAEQLLGVSDLFDSNDPWAHYIFNAIKAKELFIKDVNYIVRGGEIVIVDEFTGRVMPGRRWSDGLHQAVESKEGVEIQPETQTLASITYQNFFLLYPKLSGMTGTAKTEELEFEKTYKLEVTVVPTNRVSRRRD 417
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_ACAM1 (Protein translocase subunit secA OS=Acaryochloris marina (strain MBIC 11017) GN=secA PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.628e-56 Identity = 111/217 (51.15%), Postives = 152/217 (70.05%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVDL 655 ++ + E++V R P ++ ++DEVDSVLIDE R PL+ISG+ + +Y A+KVA L HY V+ K +V LT+EG AE L +DL+D DPWA +V NA+KAKE + DV YIVRN + +I++E TGRV RRWS+G+HQA+EAKE ++IQ ++ +A ITYQ+LF LY KL+GMTGTAKTEE EF K++++ V VPTN N R D+ Sbjct: 187 MSTSIEEVVQR---PLNYCVIDEVDSVLIDEARTPLIISGQVERPTEKYLDASKVANALQPEEHYEVDEKARNVILTDEGFVEAEKILGVSDLFDPEDPWAHYVFNAIKAKELFINDVNYIVRNDEIVIVDEFTGRVMPGRRWSDGLHQAIEAKEKVEIQNETQTLATITYQNLFLLYDKLAGMTGTAKTEEAEFEKIYKLEVTIVPTNRSNQRQDI 400
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_SPIOL (Protein translocase subunit secA, chloroplastic OS=Spinacia oleracea GN=secA PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 9.986e-56 Identity = 107/216 (49.54%), Postives = 151/216 (69.91%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 LA + ++LV+R F+F ++DEVDS+LIDE R PL+ISG A K RY AAK+A + +HYTV+ K +V + E+G AE L+ DL+D + WA +++NA+KAKE + +DV YI+R + LI++E TGRV + RRWS+G+HQAVEAKEG+ IQ +++ +A I+YQ+ F +PKL GMTGTA TE EF ++++ V VPTN P IR D Sbjct: 275 LATSVDELVLRG---FNFCVIDEVDSILIDEARTPLIISGPAEKPSERYYKAAKIAAAFERDIHYTVDEKQKTVLIMEQGYQDAEEILDVEDLYDPREQWALYILNAIKAKELFLKDVNYIIRGKEILIVDEFTGRVMQGRRWSDGLHQAVEAKEGVPIQNETITLASISYQNFFLQFPKLCGMTGTAATESAEFESIYKLKVTIVPTNKPMIRKD 487 The following BLAST results are available for this feature:
BLAST of CN189340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189340 ID=CN189340; Name=CN189340; organism=Citrus sinensis; type=EST; length=656bpback to top |