CN189340
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_SYNPW (Protein translocase subunit secA OS=Synechococcus sp. (strain WH7803) GN=secA PE=3 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 9.347e-54 Identity = 109/227 (48.02%), Postives = 147/227 (64.76%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH-----------YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 +AA+ ++V R F + ++DEVDS+LIDE R PL+ISG+ + +Y AA+VA L + Y V+ K S LT+EG A AE + DL+D DPWA ++ NALKAK+ + RDV YIVR+G+A+I++E TGRV RRWS+G HQA+EAKE L IQ ++ +A ITYQ+ F LYP+L+GMTGTAKTEE EF K +++ VPTN R D Sbjct: 194 MAADINEVVQR---EFQYCVIDEVDSILIDEARTPLIISGQVERPQEKYQKAAEVAAALTRAAEMGKDGIDPEGDYEVDEKQRSCTLTDEGFAKAEQMIGVADLYDPQDPWAHYITNALKAKDLFTRDVNYIVRDGEAVIVDEFTGRVMPGRRWSDGQHQAIEAKEALAIQPETQTLASITYQNFFLLYPRLAGMTGTAKTEETEFEKTYKLETTIVPTNRVRARQD 417
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_PHATR (Protein translocase subunit secA OS=Phaeodactylum tricornutum GN=secA PE=3 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 9.347e-54 Identity = 103/217 (47.47%), Postives = 143/217 (65.90%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVDL 655 +A N + +V+R PF++ I+DEVDS+LIDE + PL+IS + +Y VAA++ + L HY V+ KN +V LTE+G E L DL+D DPW +++NALKA Y +V YIV+N + +I++E TGR+ RRW +G+HQA+EAKE L I+ + VA ITYQ+ F LYPKLSGMTGT KT E EF K++ + V ++PT P R DL Sbjct: 185 MALNLKDVVLR---PFNYCIIDEVDSILIDEAQTPLIISNNIQTPIEKYIVAAEITDYLELNTHYKVDEKNKNVILTEDGSKQIEQILSVQDLYDPRDPWIPYIINALKANALYFNNVHYIVQNNRIIIVDEFTGRIMADRRWGDGLHQAIEAKEKLPIRQKTETVAAITYQNFFLLYPKLSGMTGTGKTAETEFEKIYNLSVEQIPTERPTQRKDL 398
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_THET8 (Protein translocase subunit secA OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=secA PE=1 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.594e-53 Identity = 113/229 (49.34%), Postives = 154/229 (67.25%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 +A + +QLV+R P H+AI+DEVDS+LIDE R PL+ISG A K Y A++A+ L +GL YTVE KN SV LT +GIA AE L L+ EN A ++ A++AKE Y RD YIV++G+ +I++E TGR+ RR+ EG+HQA+EAKEG++I+ ++ +A ITYQ+ F+LY K +GMTGTAKTEEKEF +++ M V+ VPTN P IR D Sbjct: 188 MAISPDQLVLRHDHPLHYAIIDEVDSILIDEARTPLIISGPAEKATDLYYKMAEIAKKLERGLPAEPGVRKEPTGDYTVEEKNRSVHLTLQGIAKAEKLLGIEGLFSPENMELAHMLIQAIRAKELYHRDRDYIVQDGQVIIVDEFTGRLMPGRRYGEGLHQAIEAKEGVRIERENQTLATITYQNFFRLYEKRAGMTGTAKTEEKEFQEIYGMDVVVVPTNRPVIRKD 416
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_PROM1 (Protein translocase subunit secA OS=Prochlorococcus marinus (strain NATL1A) GN=secA PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.594e-53 Identity = 111/227 (48.90%), Postives = 146/227 (64.32%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH-----------YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 +AA+ ++V R F F ++DEVDS+LIDE R PL+ISG+ + +Y AA+V E L + + Y V+ K S LT+EG A E L DL+D +PWA +V NALKAKE + +DV YIVRN +A+I++E TGRV RRWS+G HQA+EAKE L IQ ++ +A ITYQ+ F LYP+LSGMTGTAKTEE EF K +++ VPTN R D Sbjct: 194 MAADKSEIVQR---DFQFCVIDEVDSILIDEARTPLIISGQVERSQEKYKQAAQVVENLKRAIDTSKDGIDPEGDYEVDEKQRSCILTDEGFANTEKLLNVQDLFDPKEPWAHYVTNALKAKELFIKDVNYIVRNDEAVIVDEFTGRVMPGRRWSDGQHQAIEAKENLSIQPETQTLASITYQNFFLLYPRLSGMTGTAKTEEVEFEKTYKLQTTVVPTNRKISRQD 417
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_THET2 (Protein translocase subunit secA OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=secA PE=3 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.082e-53 Identity = 112/229 (48.91%), Postives = 154/229 (67.25%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 +A + +QLV+R P H+AI+DEVDS+LIDE R PL+ISG A K Y A++A+ L +GL YTVE KN SV LT +GIA AE L L+ EN A ++ A++AKE Y RD YIV++G+ +I++E TGR+ RR+ EG+HQA+EAKEG++I+ ++ +A ITYQ+ F+LY K +GMTGTAKTEEKEF +++ M V+ VPTN P +R D Sbjct: 188 MAISPDQLVLRHDHPLHYAIIDEVDSILIDEARTPLIISGPAEKATDLYYKMAEIAKKLERGLPAEPGVRKEPTGDYTVEEKNRSVHLTLQGIAKAEKLLGIEGLFSPENMELAHMLIQAIRAKELYHRDRDYIVQDGQVIIVDEFTGRLMPGRRYGEGLHQAIEAKEGVRIERENQTLATITYQNFFRLYEKRAGMTGTAKTEEKEFQEIYGMDVVVVPTNRPVVRKD 416
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_CYAP8 (Protein translocase subunit secA OS=Cyanothece sp. (strain PCC 8801) GN=secA PE=3 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.082e-53 Identity = 103/210 (49.05%), Postives = 147/210 (70.00%), Query Frame = 2 Query: 44 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVA-ELLVQGLH-----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVDL 655 +PF++ I+DEVDS+LIDE R PL+ISG+ + +Y AA +A +LL Q Y V+ K +V +T+ G AE L DL+D+++PWA ++ NA+KAKE + +DV Y++RN + +I++E TGRV RRWS+G+HQA+EAKEG++IQ ++ +A ITYQ+ F LYPKLSGMTGTAKTEE E K++ + V +PTN + R DL Sbjct: 204 RPFNYCIIDEVDSILIDEARTPLIISGQVERPTEKYLQAAAIAAQLLKQESEDDPGDYEVDEKARNVLMTDAGFEKAEQLLNVQDLYDQDNPWAHYIFNAIKAKELFTKDVNYMIRNNEIVIVDEFTGRVLPGRRWSDGLHQAIEAKEGVEIQRETQTLATITYQNFFLLYPKLSGMTGTAKTEETELEKVYNLQVTIIPTNRISRRYDL 413
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_SYNSC (Protein translocase subunit secA OS=Synechococcus sp. (strain CC9605) GN=secA PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 2.719e-53 Identity = 109/227 (48.02%), Postives = 148/227 (65.20%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH-----------YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 +AA+ ++V R F + ++DEVDS+LIDE R PL+ISG+ + +Y AA+VA L + Y V+ K S LT+EG A AE L DL++ DPWA ++ NALKAKE + +DV YIVR+G+A+I++E TGRV RRWS+G HQA+EAKE L IQ+++ +A ITYQ+ F LYP+L+GMTGTAKTEE EF K +++ VPTN R D Sbjct: 194 MAADISEVVQR---EFQYCVIDEVDSILIDEARTPLIISGQVERPQEKYQQAAEVANALARAAELSKDGIDPEGDYEVDEKQRSCTLTDEGFAKAEQMLGVADLFNPQDPWAHYITNALKAKELFVKDVNYIVRDGEAVIVDEFTGRVMPGRRWSDGQHQAIEAKEALAIQSETQTLASITYQNFFLLYPRLAGMTGTAKTEEVEFEKTYKLETTIVPTNRVRARQD 417
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_SYNS3 (Protein translocase subunit secA OS=Synechococcus sp. (strain CC9311) GN=secA PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 2.719e-53 Identity = 110/227 (48.46%), Postives = 146/227 (64.32%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH-----------YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 +AA+ ++V R F F ++DEVDS+LIDE R PL+ISG+ + +Y AA+VA L + Y V+ K S LT+EG AE + DL++ DPWA ++ NALKAKE + RDV YIVR+G+A+I++E TGRV RRWS+G HQA+EAKEGL IQ ++ +A ITYQ+ F LYP+L+GMTGTAKTEE EF K + + VPTN R D Sbjct: 194 MAADINEVVQR---EFQFCVIDEVDSILIDEARTPLIISGQVERPQEKYEKAAEVANALERAAEMGKDGIDPEGDYEVDEKQRSSTLTDEGFTKAEALIGVADLYNPQDPWAHYITNALKAKELFVRDVNYIVRDGEAVIVDEFTGRVMPGRRWSDGQHQAIEAKEGLAIQPETQTLASITYQNFFLLYPRLAGMTGTAKTEEVEFEKTYSLQTAIVPTNRVRARQD 417
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_SYNS9 (Protein translocase subunit secA OS=Synechococcus sp. (strain CC9902) GN=secA PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 3.552e-53 Identity = 109/227 (48.02%), Postives = 148/227 (65.20%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH-----------YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 +AA+ ++V R F F ++DEVDS+LIDE R PL+ISG+ ++ +Y AA++A L + Y V+ K S LT+EG A AE L DL+D DPWA ++ NALKAKE + +DV YIVR+ +A+I++E TGRV RRWS+G HQA+EAKE L+IQ ++ +A ITYQ+ F LYP+L+GMTGTAKTEE EF K +++ VPTN R D Sbjct: 194 MAADISEVVQR---EFQFCVIDEVDSILIDEARTPLIISGQVEREQEKYQQAAQLAASLERSAEMGKDGIDPEGDYEVDEKQRSCTLTDEGFAKAEQTLGVQDLFDPQDPWAHYITNALKAKELFVKDVNYIVRDDEAVIVDEFTGRVMPGRRWSDGQHQAIEAKESLQIQPETQTLASITYQNFFLLYPRLAGMTGTAKTEEVEFEKTYKLQTTIVPTNRIRARQD 417
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_ODOSI (Protein translocase subunit secA OS=Odontella sinensis GN=secA PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 6.058e-53 Identity = 102/217 (47.00%), Postives = 144/217 (66.36%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVDL 655 LA N + +R PF++ IVDEVDSVLIDE PL+I+ V +Y +A+++ + L +H+ ++ KN SV LT +G E L DL++ DPW +V+NA++A + RDV YIV+N + +I++E TGR+ RRW G+HQAVEAKE + I+ + + A ITYQ+ F +YPKLSGMTGTAKT E EF K++ +PV E+PT PN+R DL Sbjct: 185 LALNIRDVFLR---PFNYCIVDEVDSVLIDEALTPLIIANSVKTCVDKYIIASEITDYLELNVHFEIDEKNKSVLLTNQGTIQIEKILGVQDLYNPRDPWIPYVINAIRASSLFFRDVHYIVQNNRIVIVDEFTGRIMPDRRWRHGLHQAVEAKENVAIRQTTEITASITYQNFFLVYPKLSGMTGTAKTAEVEFDKIYSLPVEEIPTARPNLRQDL 398 The following BLAST results are available for this feature:
BLAST of CN189340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189340 ID=CN189340; Name=CN189340; organism=Citrus sinensis; type=EST; length=656bpback to top |