CN189340
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_EMIHU (Protein translocase subunit secA OS=Emiliania huxleyi GN=secA PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.949e-51 Identity = 100/210 (47.62%), Postives = 144/210 (68.57%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTN 631 +A E++V R P + +VDEVDS+LIDE R PL+ISG + +Y +++A +L + +HY ++ KN V+LT+EG E AL+ DL+ +DPW +V+N++KAKE + R+ YIV + +I++E TGR RRWS+G+HQA+E+KE L IQ +S +A ITYQ+LF LY KLSGMTGTAKTEE EF K++ + VI +PT+ Sbjct: 187 MAFTQEEVVQR---PLFYCVVDEVDSILIDEARTPLIISGPSEAPTQKYLQTSQLARVLQKNIHYIIDEKNQVVKLTDEGTLFCEQALKIADLYSPSDPWISYVLNSIKAKELFIRNTHYIVNVEEEVIIVDEFTGRTMAGRRWSDGLHQAIESKENLPIQDESQTLASITYQNLFLLYDKLSGMTGTAKTEELEFEKIYGLKVIPIPTH 393
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_GUITH (Protein translocase subunit secA OS=Guillardia theta GN=secA PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 3.324e-51 Identity = 99/216 (45.83%), Postives = 148/216 (68.52%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 +A + E +V R PF+F ++DEVDS+LIDE R PL+ISG + V +Y A +++ L++ + Y ++ K +V LT+ GI E L D+++ DPWA ++ NA+KAKE + ++ YI+RN + +I++E TGR+ RRWS+G+HQA+EAKE + IQ+++ +A ITYQ+ F LYPKLSGMTGTAKTEE E +++ + V VPT+ RVD Sbjct: 187 MAIDLEDIVQR---PFYFCVIDEVDSILIDEARTPLIISGPGNSPVNKYIKANVISQDLIKDIDYEIDEKARNVILTDNGILKCENLLGNTDIFNLQDPWAPYIFNAIKAKELFLENIHYIIRNQEIVIVDEFTGRIMSGRRWSDGLHQAIEAKESVPIQSETQTLASITYQNFFLLYPKLSGMTGTAKTEETELDRIYGLEVNCVPTHKIMQRVD 399
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_PORPU (Protein translocase subunit secA OS=Porphyra purpurea GN=secA PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 9.672e-51 Identity = 94/196 (47.96%), Postives = 137/196 (69.90%), Query Frame = 2 Query: 50 FHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLP 637 F F I+DEVDS+LIDE R PL+ISG + V +Y ++ +L + +HY V+ K ++ LT++G E L ++L+D +PW +++NA+KAKE + +DV YI+R+ + +I++E TGR+ RRWS+G+HQA+EAKE + IQ ++ A ITYQ+ F LYPKLSGMTGTAKTEE E K++ + VI VPT+ P Sbjct: 199 FAFCIIDEVDSILIDEARTPLIISGPSEAPVEKYTQTNLLSNILFKDVHYEVDEKARNIILTDKGTLFCEDHLSIDNLYDLENPWVHYILNAIKAKELFIKDVHYIIRDNQVVIVDEFTGRIMSGRRWSDGLHQAIEAKEQVPIQQENQTYASITYQNFFLLYPKLSGMTGTAKTEESELDKIYNLEVICVPTHRP 394
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_DEIGD (Protein translocase subunit secA OS=Deinococcus geothermalis (strain DSM 11300) GN=secA PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.263e-50 Identity = 111/230 (48.26%), Postives = 147/230 (63.91%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 +A + EQLV+R P H+AIVDEVDS+LIDE R PL+ISG A K Y V AK+ + L +G YT++ K V LTE+GIA E L DL+ EN A + A++A+E Y R+ YIV G+ +II+E TGR RR+ EG+HQA+EAKEG+KI+ ++ +A ITYQ+ F+LY K +GMTGTAKTEEKEFL ++ V+ +PTN P IR D Sbjct: 189 MAQSREQLVLRADNPLHYAIVDEVDSILIDEARTPLIISGAAEKATDLYYVYAKLVKRLQRGEPAEPGKRTEPTGDYTIDEKGKQVHLTEQGIAKIERLLSLGDLYSPENMDKAHMITQAIRARELYHREKDYIVNAEGEVVIIDEFTGRSMPGRRYGEGLHQAIEAKEGVKIENENQTLATITYQNFFRLYDKFAGMTGTAKTEEKEFLDIYGSDVLVIPTNKPVIRQD 418
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_PROMS (Protein translocase subunit secA OS=Prochlorococcus marinus (strain AS9601) GN=secA PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.155e-50 Identity = 103/227 (45.37%), Postives = 147/227 (64.76%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH-----------YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 +A + ++V R F++ ++DEVDS+LIDE R PL+ISG+ + +Y AA+++ L++ Y V+ K S LT++G A E L NDL++ DPWA ++ NALKAKE + +DV YI++N +A+I++E TGRV RRWS+G HQA+EAKE LKIQ ++ +A ITYQ+ F LYP L+GMTGTAKTEE EF K +++ +PTN R D Sbjct: 194 MATDISEVVQR---KFNYCVIDEVDSILIDEARTPLIISGQVERPQEKYQKAAELSLALIKAKELSKDGIDPEGDYEVDEKQRSCILTDQGFAKCEEYLGVNDLYNPQDPWAHYITNALKAKELFIKDVNYIIKNEEAVIVDEFTGRVMPGRRWSDGQHQAIEAKESLKIQPETQTLASITYQNFFLLYPGLAGMTGTAKTEEVEFEKTYKLESTVIPTNQIRKRQD 417
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_DEIRA (Protein translocase subunit secA OS=Deinococcus radiodurans GN=secA PE=3 SV=2) HSP 1 Score: 198.749 bits (504), Expect = 2.155e-50 Identity = 110/230 (47.83%), Postives = 147/230 (63.91%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------------HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 +A + E LV+R P H+AIVDEVDS+LIDE R PL+ISG A K Y V AK+ L +G YT+E K+ +V LTE+GI E L DL+ EN A + A++A+E Y R+ YIV G+ +I++E TGR RR+ EG+HQA+EAKEG+KI+ ++ +A ITYQ+ F+LY K +GMTGTAKTEEKEFL ++ V+ +PTN P IRVD Sbjct: 189 MAQSKEALVLRADTPLHYAIVDEVDSILIDEARTPLIISGAAEKATDLYYVFAKLIRRLQKGEPAEPGVRTEPTGDYTIEEKSKAVHLTEQGITKIERLLSLKDLYSPENMDKAHMITQAIRARELYHREKDYIVNAEGEVVIVDEFTGRSMPGRRYGEGLHQAIEAKEGVKIENENQTLATITYQNFFRLYDKFAGMTGTAKTEEKEFLDIYGSDVLVIPTNKPVIRVD 418
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_HALOH (Protein translocase subunit secA OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=secA PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.814e-50 Identity = 104/218 (47.71%), Postives = 147/218 (67.43%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVDL 655 LA N + +V H+AI+DEVDS+LIDE R PL+ISG A + Y ++ LV+G Y V+ KN +V LTEEG+A E L ++L+D+ N A + ALKA ++D YIV++G+ I++E TGR+ E RR+SEG+HQA+EAKEG+ + +S A ITYQ+ F++Y KL+GMTGTA TEE+EF+K++ M V+++PTN P IR DL Sbjct: 192 LAYNPDDVVQG---ELHYAILDEVDSILIDEARTPLIISGPAQETTKDYRKFNRIIPRLVKGRDYEVDEKNRTVHLTEEGLARVEKKLNISNLYDDQNFQLAHQLNQALKAHTLMKKDRDYIVKDGEVKIVDEFTGRIMEGRRFSEGLHQAIEAKEGVAVNKESQTFASITYQNFFRMYDKLAGMTGTAATEEEEFIKIYGMEVVQIPTNKPMIREDL 406
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_PROM2 (Protein translocase subunit secA OS=Prochlorococcus marinus (strain MIT 9215) GN=secA PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.675e-50 Identity = 103/227 (45.37%), Postives = 147/227 (64.76%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLH-----------YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 +A + ++V R F++ ++DEVDS+LIDE R PL+ISG+ + +Y AA+++ LV+ Y V+ K S LT++G A E L NDL++ DPWA ++ NALKAKE + +DV YI++N +A+I++E TGRV RRWS+G HQA+EAKE L+IQ ++ +A ITYQ+ F LYP L+GMTGTAKTEE EF K +++ +PTN R D Sbjct: 194 MATDVNEVVQR---KFNYCVIDEVDSILIDEARTPLIISGQVERPQEKYQKAAQLSLKLVKAKELSKDGIDPEGDYEVDEKQRSCILTDQGFAKCEEYLGVNDLYNPKDPWAHYITNALKAKELFIKDVNYIIKNNEAVIVDEFTGRVMPGRRWSDGQHQAIEAKESLQIQPETQTLASITYQNFFLLYPGLAGMTGTAKTEEVEFEKTYKLESTVIPTNQLRKRKD 417
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_PROM0 (Protein translocase subunit secA OS=Prochlorococcus marinus (strain MIT 9301) GN=secA PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 4.800e-50 Identity = 105/227 (46.26%), Postives = 146/227 (64.32%), Query Frame = 2 Query: 5 LAANSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAA-------KVAELLVQGLH----YTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 +A + ++V R F++ ++DEVDS+LIDE R PL+ISG+ + +Y AA K EL G+ Y V+ K S LT++G A E L +DL++ DPWA ++ NALKAKE + +DV YI++N +A+I++E TGRV RRWS+G HQA+EAKE LKIQ ++ +A ITYQ+ F LYP L+GMTGTAKTEE EF K +++ +PTN R D Sbjct: 194 MATDINEVVQR---KFNYCVIDEVDSILIDEARTPLIISGQVERPQEKYQKAAELSLELLKAKELSKDGIDPEGDYEVDEKQRSCILTDQGFAKCEEYLGVSDLYNPQDPWAHYITNALKAKELFIKDVNYIIKNEEAVIVDEFTGRVMPGRRWSDGQHQAIEAKESLKIQPETQTLASITYQNFFLLYPGLAGMTGTAKTEEVEFEKTYKLESTVIPTNQTRKRQD 417
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_ALKOO (Protein translocase subunit secA OS=Alkaliphilus oremlandii (strain OhILAs) GN=secA PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 4.800e-50 Identity = 97/204 (47.55%), Postives = 142/204 (69.61%), Query Frame = 2 Query: 44 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 +P ++AIVDEVDS+LIDE R PL+ISG+ K Y + + + L + + + V+ K NSV LTEEG+ AE ++L D EN A + ALKA + D Y+V++G+ +I+++ TGR+ RR+SEG+HQA+EAKEGL++Q +S +A IT+Q+ F++Y KLSGMTGTAKTEE EF+ ++ M V+E+PTN P +R+D Sbjct: 200 RPLNYAIVDEVDSILIDEARTPLIISGQGDKSTKMYFIVDQFVKTLKKEVDFEVDEKANSVTLTEEGVERAEKYFAVDNLSDMENTELAHHINQALKANNLMKLDKDYVVKDGEIIIVDDFTGRLMFGRRYSEGLHQAIEAKEGLEVQRESKTLATITFQNYFRMYDKLSGMTGTAKTEEDEFISIYNMDVVEIPTNKPVVRID 403 The following BLAST results are available for this feature:
BLAST of CN189340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189340 ID=CN189340; Name=CN189340; organism=Citrus sinensis; type=EST; length=656bpback to top |