CN189340
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA1_THEFY (Protein translocase subunit secA 1 OS=Thermobifida fusca (strain YX) GN=secA1 PE=3 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 1.182e-48 Identity = 100/202 (49.50%), Postives = 142/202 (70.30%), Query Frame = 2 Query: 53 HFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVDL 655 H+AIVDEVDS+LIDE R PL+ISG A ++ Y AK+A L + + Y V+ K +V +TE G+A E L ++L++ N P F+ NA+KAKE YRRD YIV++G+ LI++E TGR+ RR++EG+HQA+EAKE +KI+ ++ +A+IT Q+ F+LY KL+GMTGTA TE EF + + + V+ +PTN P IR DL Sbjct: 203 HYAIVDEVDSILIDEARTPLIISGPAEQNSRWYVEFAKIAPRLRRDVDYEVDEKKRTVGITEAGVAKVEDWLGIDNLYESVNTPLISFLHNAIKAKELYRRDRDYIVKDGEVLIVDEFTGRILRGRRYNEGMHQAIEAKEKVKIKEENQTLAKITLQNYFRLYEKLAGMTGTAVTEAAEFQQTYNLGVVPIPTNKPMIREDL 404
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_BACLD (Protein translocase subunit secA OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=secA PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.544e-48 Identity = 99/212 (46.70%), Postives = 141/212 (66.51%), Query Frame = 2 Query: 20 EQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 EQ+V R P HFA++DEVDS+LIDE R PL+ISG+A+K Y A L YT ++K V+LTEEG+ AE A +L+D + + ALKA +DV Y+V +G+ +I++ TGR+ + RR+S+G+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE+EF ++ M V+ +PTN P R D Sbjct: 194 EQMVQR---PLHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKADQDYTYDVKTKGVQLTEEGMTKAEKAFGIENLFDVRHVALNHHIAQALKAHAAMHKDVDYVVEDGQVVIVDSFTGRLMKGRRYSDGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEEEEFRNIYNMQVVTIPTNKPIARDD 402
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_SACEN (Protein translocase subunit secA OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=secA PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.017e-48 Identity = 96/200 (48.00%), Postives = 141/200 (70.50%), Query Frame = 2 Query: 56 FAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 F+IVDEVDS+LIDE R PL+ISG A + Y A++A +L + HY V+ + +V +TE+G+ + E L +L++ N P ++ NALKAKE Y+RD YIVRNG+ +I++E TGR+ RR++EG+HQA+EAKEG++I+A++ +A IT Q+ F+LY KL+GMTGTA+TE EF +++ V+ +PTN P R D Sbjct: 202 FSIVDEVDSILIDEARTPLIISGPADQSSRWYQEFARLAPMLKKDQHYEVDERKRTVGVTEDGVTIIEDQLGIENLYEAANTPLVGYLNNALKAKELYKRDKDYIVRNGEVVIVDEFTGRILHGRRYNEGMHQAIEAKEGVEIKAENQTLATITLQNYFRLYEKLAGMTGTAETEAAEFNGTYKLGVVPIPTNRPMARAD 401
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_WOLSU (Protein translocase subunit secA OS=Wolinella succinogenes GN=secA PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.634e-48 Identity = 99/205 (48.29%), Postives = 143/205 (69.76%), Query Frame = 2 Query: 44 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVDL 655 K FAIVDEVDS+LIDE R PL+ISG A++ + Y +A VA L + H+TV+ KN + LTEEGI AE ++L+ EN + + ALKA + D Y++ NG+ +I++E TGR+ E RR+SEG+HQA+EAKEG++I+ +S +A IT+Q+ F+LY KL+GMTGTA+TE EFL+++++ VI +PTN+ +R DL Sbjct: 203 KSHAFAIVDEVDSILIDEARTPLIISGPANRKLDNYKIANSVALSLQKEKHFTVDEKNRVILLTEEGIREAEKGFGVDNLYSIENAILSHHLDQALKANHLFAIDKDYVINNGEVVIVDEFTGRLSEGRRFSEGLHQALEAKEGVEIKEESQTLADITFQNYFRLYKKLAGMTGTAQTEASEFLQIYKLEVISIPTNVTVMRKDL 407
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA1_STAAR (Protein translocase subunit secA 1 OS=Staphylococcus aureus (strain MRSA252) GN=secA1 PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.634e-48 Identity = 104/213 (48.83%), Postives = 142/213 (66.67%), Query Frame = 2 Query: 17 SEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 SE VMR P HFAI+DEVDS+LIDE R PL+ISGEA K + Y A A++L Q Y + K SV LTE+G AE + +L+D +N + AL+A +RDV Y+V +G+ LI+++ TGR RR+SEG+HQA+EAKEG++IQ +S +A IT+Q+ F++Y KL+GMTGTAKTEE+EF ++ M V ++PTN P R D Sbjct: 199 SEDRVMR---PLHFAIIDEVDSILIDEARTPLIISGEAEKSTSLYTQANVFAKMLKQDEDYKYDEKTKSVHLTEQGADKAERMFKVENLYDVQNVDVISHINTALRAHVTLQRDVDYMVVDGEVLIVDQFTGRTMPGRRFSEGLHQAIEAKEGVQIQNESKTMASITFQNYFRMYNKLAGMTGTAKTEEEEFRNIYNMTVTQIPTNKPVQRND 408
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_BREBN (Protein translocase subunit secA OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=secA PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.440e-48 Identity = 98/216 (45.37%), Postives = 148/216 (68.52%), Query Frame = 2 Query: 20 EQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDENDPWARFVMN-----ALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 EQ+V R P FAI+DEVDS+LIDE R PL+ISG A+K Y + + + L + +T++ K V LT++G++ E A ++L+D A +N ALKA+ ++RDV Y+V+ G+ +I++E TGR+ RR+S+G+HQA+EAKEGL++Q++S+ +A IT Q+ F++Y KL+GMTGTAKTEE+EF K++ + V+ +PTN P RVD Sbjct: 195 EQMVQR---PLFFAIIDEVDSILIDEARTPLIISGSANKSTELYYICSHFVKRLEEEKDFTIDEKLKIVNLTDDGVSKVEQAFNIDNLYDT----AHITLNHHITAALKAQVLFKRDVDYVVQEGEVVIVDEFTGRLMVGRRYSDGLHQAIEAKEGLRVQSESMTLATITLQNYFRMYEKLAGMTGTAKTEEEEFKKIYGLDVVVIPTNKPVQRVD 403
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_BACP2 (Protein translocase subunit secA OS=Bacillus pumilus (strain SAFR-032) GN=secA PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.440e-48 Identity = 98/212 (46.23%), Postives = 143/212 (67.45%), Query Frame = 2 Query: 20 EQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 EQ+V R P H+A++DEVDS+LIDE R PL+ISG+A+K Y A L +T ++K SV+LTE G+ AE A +L+D ++ + ALKA ++DV Y+V G+ +I++ TGR+ + RR+SEG+HQA+EAKEGL++Q +S+ +A IT+Q+ F++Y KLSGMTGTAKTEE+EF ++ M V+ +PTN P +R D Sbjct: 194 EQMVQR---PLHYAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKIEDDFTYDIKTKSVQLTESGMTKAEKAFGIENLFDVKHVALNHHIAQALKAHVAMQKDVDYVVEEGQVVIVDSFTGRLMKGRRYSEGLHQAIEAKEGLEVQNESMTLATITFQNYFRMYEKLSGMTGTAKTEEEEFRNIYNMQVVTIPTNQPVVRDD 402
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA_BACC1 (Protein translocase subunit secA OS=Bacillus cereus (strain ATCC 10987) GN=secA PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.440e-48 Identity = 100/212 (47.17%), Postives = 141/212 (66.51%), Query Frame = 2 Query: 20 EQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 EQ V R P HFAI+DEVDS+L+DE R PL+ISG+A K Y A L Y+ ++K +V LTE+GI AE A +L+D ++ + AL+A RD Y+V+ G+ +I+++ TGR+ + RR+SEG+HQA+EAKEG++IQ +S+ +A IT+Q+ F++Y KLSGMTGTAKTEE+EF ++ M VI +PTN P IR D Sbjct: 194 EQCVQR---PLHFAIIDEVDSILVDEARTPLIISGQAQKSTELYMFANAFVRTLENEKDYSFDVKTKNVMLTEDGITKAEKAFHIENLFDLKHVALLHHINQALRAHVVMHRDTDYVVQEGEIVIVDQFTGRLMKGRRYSEGLHQAIEAKEGVEIQNESMTLATITFQNYFRMYEKLSGMTGTAKTEEEEFRNIYNMNVIVIPTNKPIIRDD 402
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA1_GEOTN (Protein translocase subunit secA 1 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=secA1 PE=3 SV=2) HSP 1 Score: 191.43 bits (485), Expect = 3.440e-48 Identity = 98/204 (48.04%), Postives = 142/204 (69.61%), Query Frame = 2 Query: 44 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 +P +FA+VDEVDS+LIDE R PL+ISG A K Y A L + + YT + K+ SV+LTEEG+ AE A ++L+D ++ + AL+A +RDV Y+V++GK +I++ TGR+ RR+S+G+HQA+EAKEGL+IQ +S+ +A IT+Q+ F++Y KL+GMTGTAKTEE+EF ++ M V+ +PTN P IR D Sbjct: 199 RPLYFAVVDEVDSILIDEARTPLIISGTAQKSTKLYVQANAFVRTLRKDVDYTYDEKSKSVQLTEEGMNKAERAFGIDNLFDLKHVTLNHHIQLALRAHVTMQRDVDYVVQDGKVIIVDPFTGRLMHGRRYSDGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEEEEFRNIYNMRVVVIPTNRPVIRED 402
BLAST of CN189340 vs. ExPASy Swiss-Prot
Match: SECA1_BACHK (Protein translocase subunit secA 1 OS=Bacillus thuringiensis subsp. konkukian GN=secA1 PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.440e-48 Identity = 100/212 (47.17%), Postives = 141/212 (66.51%), Query Frame = 2 Query: 20 EQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFEMPVIEVPTNLPNIRVD 652 EQ V R P HFAI+DEVDS+L+DE R PL+ISG+A K Y A L Y+ ++K +V LTE+GI AE A +L+D ++ + AL+A RD Y+V+ G+ +I+++ TGR+ + RR+SEG+HQA+EAKEG++IQ +S+ +A IT+Q+ F++Y KLSGMTGTAKTEE+EF ++ M VI +PTN P IR D Sbjct: 194 EQCVQR---PLHFAIIDEVDSILVDEARTPLIISGQAQKSTELYMFANAFVRTLENEKDYSFDVKTKNVMLTEDGITKAEKAFHIENLFDLKHVALLHHINQALRAHVVMHRDTDYVVQEGEIVIVDQFTGRLMKGRRYSEGLHQAIEAKEGVEIQNESMTLATITFQNYFRMYEKLSGMTGTAKTEEEEFRNIYNMNVIVIPTNKPIIRDD 402 The following BLAST results are available for this feature:
BLAST of CN189340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189340 ID=CN189340; Name=CN189340; organism=Citrus sinensis; type=EST; length=656bpback to top |