CN189339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_TRIEI (Protein translocase subunit secA OS=Trichodesmium erythraeum (strain IMS101) GN=secA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 7.196e-14 Identity = 39/75 (52.00%), Postives = 49/75 (65.33%), Query Frame = -3 Query: 139 DKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 363 +K P+ + Y + ++ E + E ++V GGLHVIGT HESRRIDNQLRGRAGRQGDPGSTRF + Sbjct: 606 EKAPTTEPVIEKLREVYNLIRQEYENYIEREHNQVVGCGGLHVIGTERHESRRIDNQLRGRAGRQGDPGSTRFFL 680
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_THETN (Protein translocase subunit secA OS=Thermoanaerobacter tengcongensis GN=secA PE=3 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 7.196e-14 Identity = 35/59 (59.32%), Postives = 44/59 (74.58%), Query Frame = -3 Query: 139 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 315 Y +L++ + E EV +LGGL+VIGT HE+RRIDNQLRGRAGRQGDPG +RF + Sbjct: 539 YFELLEEAKKETEKEHEEVVKLGGLYVIGTERHEARRIDNQLRGRAGRQGDPGESRFYI 597
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_PORYE (Protein translocase subunit secA OS=Porphyra yezoensis GN=secA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 7.196e-14 Identity = 37/59 (62.71%), Postives = 43/59 (72.88%), Query Frame = -3 Query: 139 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 315 Y + ++ E S E V + GGLHVIGT HESRRIDNQLRGRAGRQGDPGS+RF + Sbjct: 579 YQMIFEEFETIFSKEREYVSQAGGLHVIGTERHESRRIDNQLRGRAGRQGDPGSSRFFL 637
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA2_MYCVP (Protein translocase subunit secA 2 OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=secA2 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 7.196e-14 Identity = 42/85 (49.41%), Postives = 50/85 (58.82%), Query Frame = -3 Query: 130 LIDKQSAMYPLGPTVA-----LTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVRYC 369 L DK+ L PT + + V ++ E EV LGGL+V+GT HESRRIDNQLRGR+GRQGDPG TRF V C Sbjct: 501 LTDKRLRSRGLHPTRSPEEYDAAWAEVRREVAAESRTEAREVVALGGLYVLGTERHESRRIDNQLRGRSGRQGDPGETRFYVSLC 585
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_OSTLU (Protein translocase subunit secA, chloroplastic OS=Ostreococcus lucimarinus (strain CCE9901) GN=secA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.398e-14 Identity = 35/51 (68.63%), Postives = 42/51 (82.35%), Query Frame = -3 Query: 139 EVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 291 +V+ S E EV LGGLHV+GT HESRR+DNQLRGR+GRQGDPGSTR+ + Sbjct: 608 KVYTSAEKKEVLGLGGLHVVGTERHESRRVDNQLRGRSGRQGDPGSTRYFL 658
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_GUITH (Protein translocase subunit secA OS=Guillardia theta GN=secA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.398e-14 Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = -3 Query: 139 TVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 330 T+ Y +++ E S E V+ LGGLHVIGT HESRRIDNQLRGRAGRQGDPGS+RF + Sbjct: 570 TLRAVYQVLIEYYEKLLSPEKLRVQSLGGLHVIGTERHESRRIDNQLRGRAGRQGDPGSSRFFL 633
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_DEIRA (Protein translocase subunit secA OS=Deinococcus radiodurans GN=secA PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 9.398e-14 Identity = 35/67 (52.24%), Postives = 46/67 (68.66%), Query Frame = -3 Query: 133 PTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVRY 333 P + L ++ ++ + V+ LGGLH++GT HESRRIDNQLRGRAGRQGDPGS+RF V + Sbjct: 558 PGITLDFIRQAQELHRATVEDRQRVRDLGGLHIVGTERHESRRIDNQLRGRAGRQGDPGSSRFYVSF 624
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_SYNSC (Protein translocase subunit secA OS=Synechococcus sp. (strain CC9605) GN=secA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.227e-13 Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = -3 Query: 139 EGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 273 E S V+ GGLHVIGT HESRR+DNQLRGRAGRQGDPGSTRF + Sbjct: 641 EESRVREAGGLHVIGTERHESRRVDNQLRGRAGRQGDPGSTRFFL 685
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_SPIOL (Protein translocase subunit secA, chloroplastic OS=Spinacia oleracea GN=secA PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.227e-13 Identity = 36/59 (61.02%), Postives = 44/59 (74.58%), Query Frame = -3 Query: 139 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 315 +L V K+ + E ++V GGLHVIGT HESRRIDNQLRGR+GRQGDPGS+RF + Sbjct: 687 FLEVAKEYKTFTDEEKNKVVLAGGLHVIGTERHESRRIDNQLRGRSGRQGDPGSSRFFL 745
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_SYNP2 (Protein translocase subunit secA OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=secA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.603e-13 Identity = 40/68 (58.82%), Postives = 46/68 (67.65%), Query Frame = -3 Query: 139 PLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 342 P+ + Y ++ K S E EV + GGLHVIGT HESRRIDNQLRGRAGRQGDPGSTRF + Sbjct: 617 PVVQKLRTVYHAIEKTYHDLTSVEHDEVIQNGGLHVIGTERHESRRIDNQLRGRAGRQGDPGSTRFFL 684 The following BLAST results are available for this feature:
BLAST of CN189339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189339 ID=CN189339; Name=CN189339; organism=Citrus sinensis; type=EST; length=572bpback to top |