CN189339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_HALOH (Protein translocase subunit secA OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=secA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.094e-13 Identity = 35/44 (79.55%), Postives = 38/44 (86.36%), Query Frame = -3 Query: 139 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 270 G VK LGGLHVIGT HESRRIDNQLRGR+GRQGDPGS++F V Sbjct: 499 GEGVKELGGLHVIGTERHESRRIDNQLRGRSGRQGDPGSSQFFV 542
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_GEOSF (Protein translocase subunit secA OS=Geobacter sp. (strain FRC-32) GN=secA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.094e-13 Identity = 34/46 (73.91%), Postives = 38/46 (82.61%), Query Frame = -3 Query: 145 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRF 282 C E EV LGGLH++GT HESRRIDNQLRGR+GRQGDPGS+RF Sbjct: 549 CVKEHDEVVSLGGLHILGTERHESRRIDNQLRGRSGRQGDPGSSRF 594
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_GEOBB (Protein translocase subunit secA OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=secA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.094e-13 Identity = 34/46 (73.91%), Postives = 39/46 (84.78%), Query Frame = -3 Query: 145 CSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRF 282 C+ E EV LGGLH++GT HESRRIDNQLRGR+GRQGDPGS+RF Sbjct: 608 CAVEHDEVVALGGLHILGTERHESRRIDNQLRGRSGRQGDPGSSRF 653
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_DEIGD (Protein translocase subunit secA OS=Deinococcus geothermalis (strain DSM 11300) GN=secA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.094e-13 Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = -3 Query: 133 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVRY 261 V+ LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS+RF V + Sbjct: 582 VRELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYVSF 624
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_DEIDV (Protein translocase subunit secA OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=secA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.094e-13 Identity = 34/45 (75.56%), Postives = 39/45 (86.67%), Query Frame = -3 Query: 133 SEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVRY 267 + V+ LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS+RF V + Sbjct: 580 ARVQELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYVSF 624
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_BIFA0 (Protein translocase subunit secA OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=secA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.094e-13 Identity = 35/53 (66.04%), Postives = 42/53 (79.25%), Query Frame = -3 Query: 145 LKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRF 303 LK + +E EVK+LGGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF Sbjct: 531 LKKIKEQVKDEHEEVKKLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRF 583
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_THET8 (Protein translocase subunit secA OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=secA PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.734e-13 Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = -3 Query: 133 LSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVRY 312 L +++ C + V+ LGGL +IGT HESRRIDNQLRGRAGRQGDPG +RF V + Sbjct: 638 LERIREIREECKQDEERVRALGGLFIIGTERHESRRIDNQLRGRAGRQGDPGGSRFYVSF 697
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_THET2 (Protein translocase subunit secA OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=secA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.734e-13 Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = -3 Query: 133 LSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVRY 312 L +++ C + V+ LGGL +IGT HESRRIDNQLRGRAGRQGDPG +RF V + Sbjct: 638 LERIREIREECKQDEERVRALGGLFIIGTERHESRRIDNQLRGRAGRQGDPGGSRFYVSF 697
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_RALEH (Protein translocase subunit secA OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=secA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.734e-13 Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = -3 Query: 145 IDKQSAMYPLGPTVALTYLSV-LKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRF 366 ++KQS P ++ + +K E + +VK GGLH++GT HESRRIDNQLRGRAGRQGDPGS+RF Sbjct: 522 VEKQSGFIEADPNLSDAEKAARIKQLEDEWHSLHEQVKAAGGLHIVGTERHESRRIDNQLRGRAGRQGDPGSSRF 596
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_PORPU (Protein translocase subunit secA OS=Porphyra purpurea GN=secA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.734e-13 Identity = 37/59 (62.71%), Postives = 43/59 (72.88%), Query Frame = -3 Query: 139 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 315 Y + ++ E S E V + GGLHVIGT HESRRIDNQLRGRAGRQGDPGS+RF + Sbjct: 579 YQLIFQEYENIFSQEKKYVAQAGGLHVIGTERHESRRIDNQLRGRAGRQGDPGSSRFFL 637 The following BLAST results are available for this feature:
BLAST of CN189339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189339 ID=CN189339; Name=CN189339; organism=Citrus sinensis; type=EST; length=572bpback to top |