CN189329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHO4_YEAST (GTP-binding protein RHO4 OS=Saccharomyces cerevisiae GN=RHO4 PE=1 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 1.849e-39 Identity = 80/167 (47.90%), Postives = 108/167 (64.67%), Query Frame = 3 Query: 159 LKKIKMSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSK 656 +K+ +K V VGDGAVGKTCLLISY TFPTDY+PT+F+N+ N+ NG + L LWDTAGQE+Y+RLRPLSY ADV ++ +S+ SK S +NV W PE+KH+ P PI+LVG K DL + + + + E L K +GA A+I+CS++ Sbjct: 62 MKRTNKLPDYHLKIVVVGDGAVGKTCLLISYVQGTFPTDYIPTIFENYVTNIEGPNGQIIELALWDTAGQEEYSRLRPLSYTNADVLMVCYSVGSKTSLKNVEDLWFPEVKHFCPSTPIMLVGLKSDLYEADNL------SDLVEPSSAESLAKRLGAFAHIQCSAR 222
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHO1_SCHPO (GTP-binding protein rho1 OS=Schizosaccharomyces pombe GN=rho1 PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.119e-39 Identity = 79/157 (50.32%), Postives = 108/157 (68.79%), Query Frame = 3 Query: 195 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKT 659 K V VGDGA GKTCLLI ++ TFP YVPTVF+N+ A+V V+G V L LWDTAGQEDY+RLRPLSY + V ++ F++ S S +NV +KWI E+ H+ +PI+LV K DLR+D + + P++T +G+ + + IGA Y+ECS+KT Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLRNDPKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKT 164
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHOV_BOVIN (Rho-related GTP-binding protein RhoV OS=Bos taurus GN=Rhov PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.379e-39 Identity = 80/162 (49.38%), Postives = 108/162 (66.67%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID-----HPGAVPISTAQGEELRKLIGAPAYIECSSKTQ 662 IKCV VGDGAVGK+ L++SYT N +P Y PT D FS V+V+G+ V + LWDTAGQED +RLR L Y DVF+ FS++ +S++N+++KW+PE++ + P P++LVGT+ DLRDD I G VP AQG L + I A Y+ECS+ TQ Sbjct: 32 IKCVLVGDGAVGKSSLIVSYTCNGYPARYRPTALDTFSVQVLVDGAPVRIELWDTAGQEDLDRLRSLCYPDTDVFLACFSVVQPSSFQNITEKWLPEIRTHNPQAPVLLVGTQADLRDDVNVLIQLDQGGREGPVPQPQAQG--LAEKIRACCYLECSALTQ 191
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHO5_SCHPO (GTP-binding protein rho5 OS=Schizosaccharomyces pombe GN=rho5 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.044e-38 Identity = 78/156 (50.00%), Postives = 108/156 (69.23%), Query Frame = 3 Query: 195 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSK 656 K V VGDGA GKTCLLI ++ TFP YVPTVF+N+ A+V V+G + L LWDTAGQEDY+RLRPLSY + V ++ FS+ + S +NV +KWI E+ H+ +PI+LVG K+DLR+D + + PI+ +G+ + + IGA Y+ECS+K Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKVDLRNDPKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAK 163
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHO_DISOM (Ras-like GTP-binding protein O-RHO OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.768e-38 Identity = 78/157 (49.68%), Postives = 104/157 (66.24%), Query Frame = 3 Query: 195 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDD-KQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQ 662 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE+KH+ P +PIILVG K D+ + + P+ +E+ I A Y+ECS+KT+ Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNIPIILVGNKKTAGDEHTRRELAKMKQEPVKPDDAKEMGSRIKAFGYLECSAKTK 163
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: CRL1_CANAL (GTP-binding RHO-like protein OS=Candida albicans GN=CRL1 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.952e-37 Identity = 87/184 (47.28%), Postives = 113/184 (61.41%), Query Frame = 3 Query: 111 VIFSEILYFGN*KATVLKKIKMSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV-NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKT 659 VI E Y N K L K + + +K V VGDG GKTCLL++YT N FP+ YVPTVF+N+ V NG TV L LWDTAGQE+Y+RLRPLSY D+ ++ F++ ++ S ENV W PE+ HY PG+PIILVGTK DL D ++H ++ ++ K IGA I S+KT Sbjct: 51 VIIEEDPYIPNYKELSLANKKTNYN--MKIVVVGDGGCGKTCLLLAYTQNKFPSIYVPTVFENYVTAVQSPNGKTVELALWDTAGQEEYDRLRPLSYPDVDILLVCFAVDNEVSLENVKDMWFPEVNHYCPGIPIILVGTKSDLLSD----MNHDASIRVA--------KEIGAIGLIFTSAKT 220
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHO4_SCHPO (GTP-binding protein rho4 OS=Schizosaccharomyces pombe GN=rho4 PE=1 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 3.855e-37 Identity = 78/172 (45.35%), Postives = 108/172 (62.79%), Query Frame = 3 Query: 153 TVLKKIKMSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV--NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQF--FIDHPGAVPISTAQGEELRKLIGAPAYIECSSK 656 + KK + K V VGDG GKTCLLI ++S TFP YVPTVF+N+ ++ N + L LWDTAGQE+Y+RLRPLSY ++V +L FS+ AS NV++KW PE++H+ P PI+LVG K DLR D+ + G P++ Q + + + AP Y+ECS+K Sbjct: 2 SAFKKSGSKSETSKKLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQEEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLKADLRKDRNATEVLRTQGLTPVTYQQAQSVALSMNAP-YVECSAK 172
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RACG_DICDI (Rho-related protein racG OS=Dictyostelium discoideum GN=racG PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.035e-37 Identity = 76/159 (47.80%), Postives = 105/159 (66.04%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQ 662 IK VG+G +GKT +L+SYTSN+ +Y PTVFDN+S ++ N NL LWDTAGQE++++LR LSY DVF+L FSLI+ +S+ N+ W+ EL P PI+LVGT++DL+ + + +PIST QG EL K I A ++ECS+ TQ Sbjct: 4 IKVCVVGEGGIGKTSMLLSYTSNSISNEYQPTVFDNYSTLLMHNKKPYNLSLWDTAGQEEFSKLRRLSYPQTDVFLLCFSLINPSSFSNILDSWVQELNENCPNTPIVLVGTQMDLKSNSVILDRLCEKKQLPISTQQGIELSKKINAFDFVECSALTQ 162
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RACL_DICDI (Rho-related protein racL OS=Dictyostelium discoideum GN=racL PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.588e-37 Identity = 81/158 (51.27%), Postives = 104/158 (65.82%), Query Frame = 3 Query: 186 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPG-VPIILVGTKLDLRDDK--QFFIDHPGAVPISTAQGEELRKLIGAPAYIECS 650 ++IK V GDGAVGKT LLI++ S FP DY PTVFDNFS + NLGL+DTAGQED++RLRPL Y D+F++ +S+I+ SY NV KW E+K Y +P+ILVGT+ DLR DK + + PIS +G +RK IGA A+ ECS Sbjct: 2 QYIKMVICGDGAVGKTSLLIAFASGEFPRDYQPTVFDNFSTLYMFQNKAYNLGLFDTAGQEDFDRLRPLGYNDTDLFLICYSVINPPSYANVYDKWYSEIKLYTGSEIPLILVGTQNDLRHDKATRETLALKQQAPISYEEGMMMRKRIGAKAFTECS 159
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHO5_YEAST (GTP-binding protein RHO5 OS=Saccharomyces cerevisiae GN=RHO5 PE=1 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 1.122e-36 Identity = 87/202 (43.07%), Postives = 113/202 (55.94%), Query Frame = 3 Query: 186 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVN------------------------------LGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-----------PGVPIILVGTKLDLRDD--KQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQ 662 R IKCV +GDGAVGKT LLISYT+N+FPTDYVPTVFDN+S + + T + + LWDTAGQEDY+RLRPL Y D+F++ FS+ AS+ NV++KW+PELK + PI+LVGTK DLRDD Q + + +S + +EL + G Y ECS+ TQ Sbjct: 2 RSIKCVIIGDGAVGKTSLLISYTTNSFPTDYVPTVFDNYSTTIAIPNGTASSPLELDNGNDKRGSLSSASSSPSTDRKLYKINLWDTAGQEDYDRLRPLCYPQTDIFLICFSVSEHASFANVTEKWLPELKQTSNIEGTSLYTKLGKYPILLVGTKSDLRDDPATQKKLQEANSDYVSQEEIDELVQRCGFMGYTECSAATQ 203 The following BLAST results are available for this feature:
BLAST of CN189329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189329 ID=CN189329; Name=CN189329; organism=Citrus sinensis; type=EST; length=687bpback to top |