CN189329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHOD_MOUSE (Rho-related GTP-binding protein RhoD OS=Mus musculus GN=Rhod PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.262e-36 Identity = 70/163 (42.94%), Postives = 105/163 (64.42%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQPECE 674 +K V VGDG GKT L++ + FP Y PTVF+ ++A + + G V+L +WDTAGQ+DY+RLRPL Y A+V +L F + + S++NVS +W PE+ H+ GVPII+VG K+DLR DK + P++ +G ++ + +GA AY+ECS++ E Sbjct: 18 VKVVLVGDGGCGKTSLMMVFAKGAFPESYSPTVFERYNATLQMKGKPVHLQIWDTAGQDDYDRLRPLFYPDANVLLLCFDVTNPNSFDNVSNRWYPEVTHFCKGVPIIVVGCKIDLRKDKVLVNNLRKKRLEPVTYHRGHDMARSVGAVAYLECSARLHDNVE 180
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHOD_HUMAN (Rho-related GTP-binding protein RhoD OS=Homo sapiens GN=RHOD PE=1 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 4.262e-36 Identity = 71/159 (44.65%), Postives = 101/159 (63.52%), Query Frame = 3 Query: 186 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSK 656 R +K V VGDG GKT LL+ + FP Y PTVF+ + N+ V G V+L +WDTAGQ+DY+RLRPL Y A V +L F + S S++N+ +W PE+ H+ VPII+VG K DL DK + G P++ +G+E+ + +GA AY+ECS++ Sbjct: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSAR 174
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHOC_EMENI (GTP-binding protein rhoC OS=Emericella nidulans GN=rhoC PE=3 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 9.495e-36 Identity = 78/158 (49.37%), Postives = 101/158 (63.92%), Query Frame = 3 Query: 195 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV--NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQF--FIDHPGAVPISTAQGEELRKLIGAPAYIECSSK 656 K V VGDG GKTCLLISY+ FP YVPTVF+N+ + +G TV L LWDTAGQE+Y+RLRPLSY D+ + F++ AS ENV KW PE+ H+ P PIILVG K DLR+ + + G P++ QG+ + + A +Y+ECSSK Sbjct: 71 KFVVVGDGGCGKTCLLISYSQGYFPEKYVPTVFENYITQTLHRRSGKTVELALWDTAGQEEYDRLRPLSYPETDLLFVCFAIDCPASLENVMDKWYPEVLHFCPTTPIILVGLKSDLRNKRTCIELLKTQGLTPVTPEQGQAVAGRMNA-SYVECSSK 227
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHOF_BOVIN (Rho-related GTP-binding protein RhoF OS=Bos taurus GN=RHOF PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.608e-35 Identity = 72/168 (42.86%), Postives = 106/168 (63.10%), Query Frame = 3 Query: 177 SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGA--VPISTAQGEELRKLIGAPAYIECSSKTQPECE 674 S + +K V VGDG GKT LL+ Y+ +FP Y P+VF+ ++A+V V V L L+DTAGQEDY+RLRPLSY+ + ++ + +++ SY+NV KW PE+ H+ G+P++L+G K DLR DK+ A PI+ QG+ + I A Y+ECS+K + E Sbjct: 19 SGRKELKIVIVGDGGCGKTSLLMVYSQGSFPEHYAPSVFEKYTASVTVGSKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPMVLIGCKTDLRKDKEQLRKLRAAQLEPITYTQGQSACEQIRAALYLECSAKFRENVE 186
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: CDC42_COLGL (Cell division control protein 42 homolog OS=Colletotrichum gloeosporioides GN=CDC42 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.608e-35 Identity = 77/157 (49.04%), Postives = 103/157 (65.61%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQ 662 IKCV VGDGAVGKTCLLISYT+N FP++YVPTVFDN++ V++ LGL+DTAGQEDY+RLRPLSY DVF++ FS+ S AS+ENV++ PGV +++V + + + P+ GE + K +GA Y+ECS+ TQ Sbjct: 6 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVARSGSRGTSP-LPGV-LLIVAPVTERGSSVREKLSKQKMSPVRKEDGERMAKDLGAVKYVECSALTQ 160
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHO2_SCHPO (GTP-binding protein rho2 OS=Schizosaccharomyces pombe GN=rho2 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.791e-34 Identity = 79/164 (48.17%), Postives = 101/164 (61.59%), Query Frame = 3 Query: 195 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVP---------ISTAQGEELRKLIGAPAYIECSSKT 659 K V VGDGA GKT LL +T FPT+YVPTVF+N+ ++ V+G +V L LWDTAGQE+Y RLRP+SY A + ++ F++ S S ENVS KWI E+ P VP ILVG K DLR D P A+ + + Q E + + IGA Y+ECSS T Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSD-------PVAIEEMRRRNQNFVKSQQAELVAQRIGARKYMECSSLT 166
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHOF_HUMAN (Rho-related GTP-binding protein RhoF OS=Homo sapiens GN=RHOF PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.055e-34 Identity = 71/163 (43.56%), Postives = 103/163 (63.19%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGA--VPISTAQGEELRKLIGAPAYIECSSKTQPECE 674 +K V VGDG GKT LL+ Y+ +FP Y P+VF+ ++A+V V V L L+DTAGQEDY+RLRPLSY+ + ++ + +++ SY+NV KW PE+ H+ G+P++L+G K DLR DK+ A PI+ QG + I A Y+ECS+K + E Sbjct: 20 LKIVIVGDGGCGKTSLLMVYSQGSFPEHYAPSVFEKYTASVTVGSKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPMVLIGCKTDLRKDKEQLRKLRAAQLEPITYMQGLSACEQIRAALYLECSAKFRENVE 182
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHOF_MOUSE (Rho-related GTP-binding protein RhoF OS=Mus musculus GN=Rhof PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.887e-34 Identity = 71/168 (42.26%), Postives = 103/168 (61.31%), Query Frame = 3 Query: 177 SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGA--VPISTAQGEELRKLIGAPAYIECSSKTQPECE 674 SA + +K V VGDG GKT LL+ Y +FP Y P+VF+ ++A+V V V L L+DTAGQEDY+RLRPLSY+ + ++ + +++ SY+NV KW PE+ H+ G+P +L+G K DLR DK+ A PI+ QG + + Y+ECS+K + E Sbjct: 15 SARKELKIVIVGDGGCGKTSLLMVYCQGSFPEHYAPSVFEKYTASVTVGNKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPTVLIGCKTDLRKDKEQLRKLRAAQLEPITYTQGLNACEQMRGALYLECSAKFRENVE 182
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RACM_DICDI (Rho-related protein racM OS=Dictyostelium discoideum GN=racM PE=3 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 1.980e-33 Identity = 74/161 (45.96%), Postives = 100/161 (62.11%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYT-SNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRD-----DKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSK 656 IK VT+GD VGKT LL++YT S +FP +YVPT DNF +NG +L +WDTAG E Y+ LRPL Y D+ +L F++ ++ S+ ++ WI E+ Y PG+PIILVGTK+DLRD DK F+ + +G L K IGA + ECSS+ Sbjct: 6 IKIVTIGDYGVGKTTLLMTYTASGSFPQEYVPTALDNFIHEATINGKKASLSIWDTAGGEYYHELRPLIYPETDILLLLFAIENRESFLHIKTNWITEINQYIPGIPIILVGTKIDLRDSDLIKDKSNFVKY--------KEGLALSKEIGASHFCECSSR 158
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHO4_ASHGO (GTP-binding protein RHO4 OS=Ashbya gossypii GN=RHO4 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.369e-32 Identity = 67/158 (42.41%), Postives = 100/158 (63.29%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQ 662 IK V VGDGA GKT LL+SYT FP DYVPT+F+N+ N+ G + L LWDTAGQE+Y+RLRPLSY D+ ++ ++ ++ S N + W PE++H+ P P++LVG K DL + +D + + E + + +GA +++CS+KT+ Sbjct: 53 IKIVVVGDGATGKTSLLMSYTQGQFPEDYVPTIFENYVTNIEGPRGKVIELALWDTAGQEEYSRLRPLSYGDVDIVMVCYAADNRTSLTNAEELWFPEVRHFCPHAPMMLVGLKSDL-----YSLDALDRL-VDPTDAELVARKMGAFVHLQCSAKTR 204 The following BLAST results are available for this feature:
BLAST of CN189329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189329 ID=CN189329; Name=CN189329; organism=Citrus sinensis; type=EST; length=687bpback to top |