CN189329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHO1_ENTHI (Ras-like GTP-binding protein RHO1 OS=Entamoeba histolytica GN=RHO1 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.369e-32 Identity = 71/159 (44.65%), Postives = 103/159 (64.78%), Query Frame = 3 Query: 177 SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSS 653 + + +K V VGDGAVGKTCLL++++ PT YVPTVF+NFS + L LWDTAGQE+Y+RLRPLSY +DV +L F++ ++ S++N+S KW PE+KH + +IL K+DLR D + ++ +G++L + +G AYIE SS Sbjct: 16 NGKKALKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSHVMKYKNEEFILDLWDTAGQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKH----LYLILQRLKVDLRKDV--------SDDVTKQEGDDLCQKLGCVAYIEASS 162
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHO3_SCHPO (GTP-binding protein rho3 OS=Schizosaccharomyces pombe GN=rho3 PE=1 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 4.128e-31 Identity = 68/154 (44.16%), Postives = 97/154 (62.99%), Query Frame = 3 Query: 195 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSK 656 K V +GDGA GKT LL +T FP Y PT+F+N+ ++ V+G+++ L LWDTAGQE+Y++LR LSY V ++ F++ S+ S ENV KW+PE+ PGV ++LV K DLR + +DH + I +G K I A Y+ECS+K Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEYDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRGADEEQVDH--SKIIDYEEGLAAAKKINAVRYLECSAK 166
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RACI_DICDI (Rho-related protein racI OS=Dictyostelium discoideum GN=racI PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.128e-31 Identity = 68/160 (42.50%), Postives = 101/160 (63.12%), Query Frame = 3 Query: 189 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGV--PIILVGTKLDLRDDK---QFFIDHPGAVPISTAQGEELRKLIGAPAYIECSS 653 +IK + +GD GKT ++++Y++ +FPT YVP+ D S ++ N ++G WD++ +++ RP +Y +V IL FS+ S S+ENVSKKWIPE++ YAP + PIIL+GTK DLR+D+ ++ PIS QG L K I A Y+ECSS Sbjct: 5 YIKLLVLGDSKTGKTTMMMTYSTGSFPTGYVPSHVDATSLDIEYNKQVCHVGFWDSSALAEFDNTRPSTYPNTNVIILCFSIDSPTSFENVSKKWIPEIRQYAPSIHTPIILLGTKCDLREDENTINLLKENNQMPPISYKQGLALSKEIKATMYLECSS 164
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHOH_MOUSE (Rho-related GTP-binding protein RhoH OS=Mus musculus GN=Rhoh PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.201e-30 Identity = 64/154 (41.56%), Postives = 99/154 (64.29%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSS 653 IKCV VGD AVGKT LL+ +TS TFP Y PTV++N +V ++G ++LGLWDTAG + + +RPLSY+ ADV ++ +S+ + S+ N+ KWI E++ P P+++V T+ D R+ + A I+ +G+ L + + A Y+ECS+ Sbjct: 5 IKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWISEIRSNLPCTPVLVVATQTDQRE-----VGPHRASCINAIEGKRLAQDVRAKGYLECSA 153
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHOH_BOVIN (Rho-related GTP-binding protein RhoH OS=Bos taurus GN=RHOH PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.569e-30 Identity = 63/154 (40.91%), Postives = 100/154 (64.94%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSS 653 IKCV VGD AVGKT LL+ +TS TFP Y PTV++N +V+++G ++LGLWDTAG + + +RPLSY+ ADV ++ +S+ + S+ N+ KWI E++ P P+++V T+ D R+ + A ++ +G+ L + + A Y+ECS+ Sbjct: 5 IKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVLMDGIQISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEVRSNLPCTPVLVVATQTDQRE-----VGPHRASCVNAIEGKRLAQDVRAKGYLECSA 153
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHO2_YEAST (GTP-binding protein RHO2 OS=Saccharomyces cerevisiae GN=RHO2 PE=1 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 2.049e-30 Identity = 71/156 (45.51%), Postives = 94/156 (60.26%), Query Frame = 3 Query: 195 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPG-AVPISTAQGEELRKLIGAPAYIECSSKT 659 K V +GDGA GKT LL +T FP Y PTVF+N+ + V+G V+L LWDTAGQE+Y RLRP SY AD+ ++ F++ + S N KW E Y P PI+LVG K DLR + F + VPI A +++ + IGA Y+ECS+ T Sbjct: 9 KLVIIGDGACGKTSLLYVFTLGKFPEQYHPTVFENYVTDCRVDGIKVSLTLWDTAGQEEYERLRPFSYSKADIILIGFAVDNFESLINARTKWADEALRYCPDAPIVLVGLKKDLRQEAHFKENATDEMVPIEDA--KQVARAIGAKKYMECSALT 162
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHOH_HUMAN (Rho-related GTP-binding protein RhoH OS=Homo sapiens GN=RHOH PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.676e-30 Identity = 63/154 (40.91%), Postives = 100/154 (64.94%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSS 653 IKCV VGD AVGKT LL+ +TS TFP Y PTV++N +V ++G ++LGLWDTAG + + +RPLSY+ ADV ++ +S+ + S+ N+ KWI E++ P P+++V T+ D R+ + A ++ +G++L + + A Y+ECS+ Sbjct: 5 IKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEIRSNLPCTPVLVVATQTDQRE-----MGPHRASCVNAMEGKKLAQDVRAKGYLECSA 153
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RND3_RAT (Rho-related GTP-binding protein RhoE OS=Rattus norvegicus GN=Rnd3 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.608e-29 Identity = 63/164 (38.41%), Postives = 97/164 (59.15%), Query Frame = 3 Query: 174 MSASRFIKC--VTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID--HPGAVPISTAQGEELRKLIGAPAYIECSS 653 M ++ +KC V VGD GKT LL + + FP +YVPTVF+N++A+ ++ + L LWDT+G Y+ +RPLSY +D ++ F + + ++V KKW E++ + P ++LVG K DLR D ++ + P+S QG + K IGA YIECS+ Sbjct: 16 MDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSA 179
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RND3_PONAB (Rho-related GTP-binding protein RhoE OS=Pongo abelii GN=RND3 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.608e-29 Identity = 63/164 (38.41%), Postives = 97/164 (59.15%), Query Frame = 3 Query: 174 MSASRFIKC--VTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID--HPGAVPISTAQGEELRKLIGAPAYIECSS 653 M ++ +KC V VGD GKT LL + + FP +YVPTVF+N++A+ ++ + L LWDT+G Y+ +RPLSY +D ++ F + + ++V KKW E++ + P ++LVG K DLR D ++ + P+S QG + K IGA YIECS+ Sbjct: 16 MDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSA 179
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RND3_MOUSE (Rho-related GTP-binding protein RhoE OS=Mus musculus GN=Rnd3 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.608e-29 Identity = 63/164 (38.41%), Postives = 97/164 (59.15%), Query Frame = 3 Query: 174 MSASRFIKC--VTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID--HPGAVPISTAQGEELRKLIGAPAYIECSS 653 M ++ +KC V VGD GKT LL + + FP +YVPTVF+N++A+ ++ + L LWDT+G Y+ +RPLSY +D ++ F + + ++V KKW E++ + P ++LVG K DLR D ++ + P+S QG + K IGA YIECS+ Sbjct: 16 MDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSA 179 The following BLAST results are available for this feature:
BLAST of CN189329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189329 ID=CN189329; Name=CN189329; organism=Citrus sinensis; type=EST; length=687bpback to top |