CN189329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHOQ_MOUSE (Rho-related GTP-binding protein RhoQ OS=Mus musculus GN=Rhoq PE=1 SV=2) HSP 1 Score: 191.43 bits (485), Expect = 3.717e-48 Identity = 88/159 (55.35%), Postives = 121/159 (76.10%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQ 662 +KCV VGDGAVGKTCLL+SY ++ FP +YVPTVFD+++ +V V G LGL+DTAGQEDY+RLRPLSY DVF++ FS+++ AS++NV ++W+PELK YAP VP +L+GT++DLRDD + ++ P+ QG++L K IGA Y+ECS+ TQ Sbjct: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPVCVEQGQKLAKEIGACCYVECSALTQ 168
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: CDC42_ASHGO (Cell division control protein 42 OS=Ashbya gossypii GN=CDC42 PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 4.854e-48 Identity = 88/159 (55.35%), Postives = 117/159 (73.58%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQ 662 +KCV VGDGAVGKTCLLISYT+N FP DYVPTVFDN++ V++ LGL+DTAGQEDY+RLRPLSY DVF++ FS++S S+ENV +KW PE+ H+ PGVP ++VGT++DLR++K + PI+ QGE+ + + A Y+ECS+ TQ Sbjct: 4 LKCVVVGDGAVGKTCLLISYTTNQFPADYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPSTDVFLVCFSVVSPPSFENVKEKWFPEVHHHCPGVPCLIVGTQIDLRENKMVIEKLQRQRLRPITPEQGEKFARELRAVKYVECSALTQ 162
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: CDC42_CAEEL (Cell division control protein 42 homolog OS=Caenorhabditis elegans GN=cdc-42 PE=1 SV=2) HSP 1 Score: 190.274 bits (482), Expect = 8.280e-48 Identity = 90/159 (56.60%), Postives = 118/159 (74.21%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQ 662 IKCV VGDGAVGKTCLLISYT+N FP++YVPTVFDN++ V++ G LGL+DTAGQEDY+RLRPLSY DVF++ FS+++ AS+ENV +KW+PE+ H+ P +LVGT++DLRDD + P+ST GE+L K + A Y+ECS+ TQ Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCSKTPFLLVGTQVDLRDDPGMLEKLAKNKQKPVSTDVGEKLAKELKAVKYVECSALTQ 162
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: CDC42_AEDAE (Cdc42 homolog OS=Aedes aegypti GN=Cdc42 PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.081e-47 Identity = 89/159 (55.97%), Postives = 119/159 (74.84%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQ 662 IKCV VGDGAVGKTCLLISYT+N FP++YVPTVFDN++ V++ G LGL+DTAGQEDY+RLRPLSY DVF++ FS++S +S+ENV +KW+PE+ H+ P +LVGT++DLRD++ + PI+ QGE+L K + A Y+ECS+ TQ Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDEQSTLEKLAKNKQKPITLEQGEKLAKELKAVKYVECSALTQ 162
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: CDC42_DROME (Cdc42 homolog OS=Drosophila melanogaster GN=Cdc42 PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.412e-47 Identity = 89/159 (55.97%), Postives = 118/159 (74.21%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQ 662 IKCV VGDGAVGKTCLLISYT+N FP++YVPTVFDN++ V++ G LGL+DTAGQEDY+RLRPLSY DVF++ FS++S +S+ENV +KW+PE+ H+ P +LVGT++DLRD+ + PI+ QGE+L K + A Y+ECS+ TQ Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLAKNKQKPITMEQGEKLAKELKAVKYVECSALTQ 162
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: CDC42_ANOGA (Cdc42 homolog OS=Anopheles gambiae GN=Cdc42 PE=2 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 1.412e-47 Identity = 89/159 (55.97%), Postives = 118/159 (74.21%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQ 662 IKCV VGDGAVGKTCLLISYT+N FP++YVPTVFDN++ V++ G LGL+DTAGQEDY+RLRPLSY DVF++ FS++S +S+ENV +KW+PE+ H+ P +LVGT++DLRD+ + PI+ QGE+L K + A Y+ECS+ TQ Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLAKNKQKPITLEQGEKLAKELKAVKYVECSALTQ 162
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: CDC42_DROPS (Cdc42 homolog OS=Drosophila pseudoobscura pseudoobscura GN=Cdc42 PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.845e-47 Identity = 89/159 (55.97%), Postives = 118/159 (74.21%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQ 662 IKCV VGDGAVGKTCLLISYT+N FP++YVPTVFDN++ V++ G LGL+DTAGQEDY+RLRPLSY DVF++ FS++S +S+ENV +KW+PE+ H+ P +LVGT++DLRD+ + PI+ QGE+L K + A Y+ECS+ TQ Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDETSTLEKLAKNKQKPITMEQGEKLAKELKAVKYVECSALTQ 162
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHOG_MOUSE (Rho-related GTP-binding protein RhoG OS=Mus musculus GN=Rhog PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.409e-47 Identity = 94/159 (59.12%), Postives = 113/159 (71.07%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLR--DDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQ 662 IKCV VGDGAVGKTCLLI YT+N FP +Y+PTVFDN+SA V+G TVNL LWDTAGQE+Y+RLR LSY +VF++ FS+ S SYENV KW PE+ H+ P VPI+LVGTK DLR D + G PI+ QG+ L K I A Y+ECS+ Q Sbjct: 4 IKCVVVGDGAVGKTCLLICYTTNAFPKEYIPTVFDNYSAQSAVDGRTVNLNLWDTAGQEEYDRLRTLSYPQTNVFVICFSIASPPSYENVRHKWHPEVCHHCPDVPILLVGTKKDLRAQPDTLRRLKEQGQAPITPQQGQALAKQIHAVRYLECSALQQ 162
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHOG_HUMAN (Rho-related GTP-binding protein RhoG OS=Homo sapiens GN=RHOG PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.409e-47 Identity = 94/159 (59.12%), Postives = 113/159 (71.07%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLR--DDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQ 662 IKCV VGDGAVGKTCLLI YT+N FP +Y+PTVFDN+SA V+G TVNL LWDTAGQE+Y+RLR LSY +VF++ FS+ S SYENV KW PE+ H+ P VPI+LVGTK DLR D + G PI+ QG+ L K I A Y+ECS+ Q Sbjct: 4 IKCVVVGDGAVGKTCLLICYTTNAFPKEYIPTVFDNYSAQSAVDGRTVNLNLWDTAGQEEYDRLRTLSYPQTNVFVICFSIASPPSYENVRHKWHPEVCHHCPDVPILLVGTKKDLRAQPDTLRRLKEQGQAPITPQQGQALAKQIHAVRYLECSALQQ 162
BLAST of CN189329 vs. ExPASy Swiss-Prot
Match: RHOG_CRICR (Rho-related GTP-binding protein RhoG OS=Cricetus cricetus GN=RHOG PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.409e-47 Identity = 94/159 (59.12%), Postives = 113/159 (71.07%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLR--DDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQ 662 IKCV VGDGAVGKTCLLI YT+N FP +Y+PTVFDN+SA V+G TVNL LWDTAGQE+Y+RLR LSY +VF++ FS+ S SYENV KW PE+ H+ P VPI+LVGTK DLR D + G PI+ QG+ L K I A Y+ECS+ Q Sbjct: 4 IKCVVVGDGAVGKTCLLICYTTNAFPKEYIPTVFDNYSAQSAVDGRTVNLNLWDTAGQEEYDRLRTLSYPQTNVFVICFSIASPPSYENVRHKWHPEVCHHCPDVPILLVGTKKDLRAQPDTLRRLKEQGQAPITPQQGQALAKQIHAVRYLECSALQQ 162 The following BLAST results are available for this feature:
BLAST of CN189329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189329 ID=CN189329; Name=CN189329; organism=Citrus sinensis; type=EST; length=687bpback to top |